data_7ACI # _model_server_result.job_id XMjRwYW4_EknD_yawzyEgQ _model_server_result.datetime_utc '2024-11-26 15:35:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aci # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":610}' # _entry.id 7ACI # _exptl.entry_id 7ACI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 342.513 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{S})-2,3-bis(oxidanyl)propyl] heptadec-9-enoate' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ACI _cell.length_a 48.775 _cell.length_b 76.173 _cell.length_c 156.531 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ACI _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (y,z,x)' _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N # _chem_comp.formula 'C20 H38 O4' _chem_comp.formula_weight 342.513 _chem_comp.id LH9 _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{S})-2,3-bis(oxidanyl)propyl] heptadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C20 LH9 sing 207 n n C20 C19 LH9 sing 208 n n C19 O3 LH9 sing 209 n n C19 C18 LH9 sing 210 n n C18 O2 LH9 sing 211 n n O2 C17 LH9 sing 212 n n C17 O1 LH9 doub 213 n n C17 C16 LH9 sing 214 n n C16 C15 LH9 sing 215 n n C15 C14 LH9 sing 216 n n C14 C13 LH9 sing 217 n n C13 C12 LH9 sing 218 n n C12 C11 LH9 sing 219 n n C11 C10 LH9 sing 220 n n C10 C9 LH9 sing 221 n n C9 C8 LH9 doub 222 e n C8 C7 LH9 sing 223 n n C7 C6 LH9 sing 224 n n C5 C6 LH9 sing 225 n n C5 C4 LH9 sing 226 n n C4 C3 LH9 sing 227 n n C3 C2 LH9 sing 228 n n C2 C1 LH9 sing 229 n n C1 H1 LH9 sing 230 n n C1 H3 LH9 sing 231 n n C1 H2 LH9 sing 232 n n C10 H19 LH9 sing 233 n n C10 H18 LH9 sing 234 n n C11 H20 LH9 sing 235 n n C11 H21 LH9 sing 236 n n C12 H23 LH9 sing 237 n n C12 H22 LH9 sing 238 n n C13 H24 LH9 sing 239 n n C13 H25 LH9 sing 240 n n C14 H27 LH9 sing 241 n n C14 H26 LH9 sing 242 n n C15 H29 LH9 sing 243 n n C15 H28 LH9 sing 244 n n C16 H30 LH9 sing 245 n n C16 H31 LH9 sing 246 n n C18 H32 LH9 sing 247 n n C18 H33 LH9 sing 248 n n C19 H34 LH9 sing 249 n n C2 H5 LH9 sing 250 n n C2 H4 LH9 sing 251 n n C20 H36 LH9 sing 252 n n C20 H35 LH9 sing 253 n n C3 H7 LH9 sing 254 n n C3 H6 LH9 sing 255 n n C4 H8 LH9 sing 256 n n C4 H9 LH9 sing 257 n n C5 H11 LH9 sing 258 n n C5 H10 LH9 sing 259 n n C6 H13 LH9 sing 260 n n C6 H12 LH9 sing 261 n n C7 H15 LH9 sing 262 n n C7 H14 LH9 sing 263 n n C8 H39 LH9 sing 264 n n C9 H17 LH9 sing 265 n n O3 H37 LH9 sing 266 n n O4 H38 LH9 sing 267 n n # _atom_sites.entry_id 7ACI _atom_sites.fract_transf_matrix[1][1] 0.020502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006389 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 601 1 GOL GOL . C 2 GOL A 1 602 2 GOL GOL . D 2 GOL A 1 603 3 GOL GOL . E 2 GOL A 1 604 4 GOL GOL . F 2 GOL A 1 605 5 GOL GOL . G 2 GOL A 1 606 6 GOL GOL . H 3 LH9 A 1 607 7 LH9 LH9 . I 3 LH9 A 1 608 8 LH9 LH9 . J 3 LH9 A 1 609 9 LH9 LH9 . K 3 LH9 A 1 610 10 LH9 LH9 . L 3 LH9 A 1 611 11 LH9 LH9 . M 3 LH9 A 1 612 12 LH9 LH9 . N 4 HOH A 1 701 66 HOH HOH . N 4 HOH A 2 702 20 HOH HOH . N 4 HOH A 3 703 57 HOH HOH . N 4 HOH A 4 704 53 HOH HOH . N 4 HOH A 5 705 65 HOH HOH . N 4 HOH A 6 706 68 HOH HOH . N 4 HOH A 7 707 73 HOH HOH . N 4 HOH A 8 708 43 HOH HOH . N 4 HOH A 9 709 23 HOH HOH . N 4 HOH A 10 710 31 HOH HOH . N 4 HOH A 11 711 5 HOH HOH . N 4 HOH A 12 712 26 HOH HOH . N 4 HOH A 13 713 30 HOH HOH . N 4 HOH A 14 714 60 HOH HOH . N 4 HOH A 15 715 18 HOH HOH . N 4 HOH A 16 716 24 HOH HOH . N 4 HOH A 17 717 13 HOH HOH . N 4 HOH A 18 718 50 HOH HOH . N 4 HOH A 19 719 41 HOH HOH . N 4 HOH A 20 720 33 HOH HOH . N 4 HOH A 21 721 71 HOH HOH . N 4 HOH A 22 722 6 HOH HOH . N 4 HOH A 23 723 3 HOH HOH . N 4 HOH A 24 724 15 HOH HOH . N 4 HOH A 25 725 29 HOH HOH . N 4 HOH A 26 726 64 HOH HOH . N 4 HOH A 27 727 25 HOH HOH . N 4 HOH A 28 728 8 HOH HOH . N 4 HOH A 29 729 69 HOH HOH . N 4 HOH A 30 730 11 HOH HOH . N 4 HOH A 31 731 35 HOH HOH . N 4 HOH A 32 732 27 HOH HOH . N 4 HOH A 33 733 12 HOH HOH . N 4 HOH A 34 734 61 HOH HOH . N 4 HOH A 35 735 28 HOH HOH . N 4 HOH A 36 736 21 HOH HOH . N 4 HOH A 37 737 4 HOH HOH . N 4 HOH A 38 738 46 HOH HOH . N 4 HOH A 39 739 40 HOH HOH . N 4 HOH A 40 740 14 HOH HOH . N 4 HOH A 41 741 9 HOH HOH . N 4 HOH A 42 742 56 HOH HOH . N 4 HOH A 43 743 52 HOH HOH . N 4 HOH A 44 744 37 HOH HOH . N 4 HOH A 45 745 63 HOH HOH . N 4 HOH A 46 746 67 HOH HOH . N 4 HOH A 47 747 2 HOH HOH . N 4 HOH A 48 748 17 HOH HOH . N 4 HOH A 49 749 19 HOH HOH . N 4 HOH A 50 750 42 HOH HOH . N 4 HOH A 51 751 54 HOH HOH . N 4 HOH A 52 752 48 HOH HOH . N 4 HOH A 53 753 55 HOH HOH . N 4 HOH A 54 754 58 HOH HOH . N 4 HOH A 55 755 49 HOH HOH . N 4 HOH A 56 756 38 HOH HOH . N 4 HOH A 57 757 7 HOH HOH . N 4 HOH A 58 758 1 HOH HOH . N 4 HOH A 59 759 22 HOH HOH . N 4 HOH A 60 760 34 HOH HOH . N 4 HOH A 61 761 44 HOH HOH . N 4 HOH A 62 762 39 HOH HOH . N 4 HOH A 63 763 16 HOH HOH . N 4 HOH A 64 764 32 HOH HOH . N 4 HOH A 65 765 72 HOH HOH . N 4 HOH A 66 766 59 HOH HOH . N 4 HOH A 67 767 70 HOH HOH . N 4 HOH A 68 768 62 HOH HOH . N 4 HOH A 69 769 36 HOH HOH . N 4 HOH A 70 770 51 HOH HOH . N 4 HOH A 71 771 10 HOH HOH . N 4 HOH A 72 772 47 HOH HOH . N 4 HOH A 73 773 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LH9 . . . K 3 -5.079 3.553 27.102 1 66.21 ? C1 LH9 610 A 1 HETATM 2 C C10 LH9 . . . K 3 0.891 -4.734 26.045 1 70.03 ? C10 LH9 610 A 1 HETATM 3 C C11 LH9 . . . K 3 2.274 -4.331 26.628 1 70.07 ? C11 LH9 610 A 1 HETATM 4 C C12 LH9 . . . K 3 2.265 -4.086 28.156 1 70.37 ? C12 LH9 610 A 1 HETATM 5 C C13 LH9 . . . K 3 2.299 -5.373 28.984 1 71.31 ? C13 LH9 610 A 1 HETATM 6 C C14 LH9 . . . K 3 3.711 -5.869 29.321 1 72.02 ? C14 LH9 610 A 1 HETATM 7 C C15 LH9 . . . K 3 4.355 -5.102 30.482 1 72.8 ? C15 LH9 610 A 1 HETATM 8 C C16 LH9 . . . K 3 3.765 -5.398 31.875 1 74.28 ? C16 LH9 610 A 1 HETATM 9 C C17 LH9 . . . K 3 4.521 -6.539 32.556 1 76.19 ? C17 LH9 610 A 1 HETATM 10 C C18 LH9 . . . K 3 6.278 -7.041 34.058 1 78.17 ? C18 LH9 610 A 1 HETATM 11 C C19 LH9 . . . K 3 7.302 -6.276 34.963 1 78.74 ? C19 LH9 610 A 1 HETATM 12 C C2 LH9 . . . K 3 -3.915 2.689 27.604 1 66.56 ? C2 LH9 610 A 1 HETATM 13 C C20 LH9 . . . K 3 8.243 -7.274 35.71 1 79.38 ? C20 LH9 610 A 1 HETATM 14 C C3 LH9 . . . K 3 -3.351 1.727 26.54 1 66.41 ? C3 LH9 610 A 1 HETATM 15 C C4 LH9 . . . K 3 -1.806 1.69 26.508 1 66.48 ? C4 LH9 610 A 1 HETATM 16 C C5 LH9 . . . K 3 -1.207 0.807 25.383 1 66.62 ? C5 LH9 610 A 1 HETATM 17 C C6 LH9 . . . K 3 -0.388 -0.399 25.877 1 67.05 ? C6 LH9 610 A 1 HETATM 18 C C7 LH9 . . . K 3 -1.175 -1.713 25.99 1 67.56 ? C7 LH9 610 A 1 HETATM 19 C C8 LH9 . . . K 3 -0.573 -2.799 26.869 1 68.45 ? C8 LH9 610 A 1 HETATM 20 C C9 LH9 . . . K 3 -0.421 -4.087 26.521 1 69.49 ? C9 LH9 610 A 1 HETATM 21 O O1 LH9 . . . K 3 4.583 -7.654 32.118 1 76.49 ? O1 LH9 610 A 1 HETATM 22 O O2 LH9 . . . K 3 5.163 -6.221 33.727 1 77.38 ? O2 LH9 610 A 1 HETATM 23 O O3 LH9 . . . K 3 6.513 -5.638 35.928 1 78.71 ? O3 LH9 610 A 1 HETATM 24 O O4 LH9 . . . K 3 8.639 -6.611 36.876 1 79.61 ? O4 LH9 610 A 1 HETATM 25 H H1 LH9 . . . K 3 -5.31 4.402 27.758 1 79.56 ? H1 LH9 610 A 1 HETATM 26 H H3 LH9 . . . K 3 -4.901 3.995 26.113 1 79.56 ? H3 LH9 610 A 1 HETATM 27 H H2 LH9 . . . K 3 -6.023 3.001 27.003 1 79.56 ? H2 LH9 610 A 1 HETATM 28 H H19 LH9 . . . K 3 0.792 -5.826 26.187 1 84.15 ? H19 LH9 610 A 1 HETATM 29 H H18 LH9 . . . K 3 0.953 -4.591 24.951 1 84.15 ? H18 LH9 610 A 1 HETATM 30 H H20 LH9 . . . K 3 2.644 -3.422 26.113 1 84.19 ? H20 LH9 610 A 1 HETATM 31 H H21 LH9 . . . K 3 3.022 -5.112 26.387 1 84.19 ? H21 LH9 610 A 1 HETATM 32 H H23 LH9 . . . K 3 3.124 -3.444 28.435 1 84.55 ? H23 LH9 610 A 1 HETATM 33 H H22 LH9 . . . K 3 1.371 -3.492 28.432 1 84.55 ? H22 LH9 610 A 1 HETATM 34 H H24 LH9 . . . K 3 1.75 -6.17 28.451 1 85.68 ? H24 LH9 610 A 1 HETATM 35 H H25 LH9 . . . K 3 1.732 -5.224 29.921 1 85.68 ? H25 LH9 610 A 1 HETATM 36 H H27 LH9 . . . K 3 3.682 -6.951 29.562 1 86.53 ? H27 LH9 610 A 1 HETATM 37 H H26 LH9 . . . K 3 4.359 -5.796 28.424 1 86.53 ? H26 LH9 610 A 1 HETATM 38 H H29 LH9 . . . K 3 5.442 -5.31 30.506 1 87.47 ? H29 LH9 610 A 1 HETATM 39 H H28 LH9 . . . K 3 4.285 -4.014 30.291 1 87.47 ? H28 LH9 610 A 1 HETATM 40 H H30 LH9 . . . K 3 2.688 -5.667 31.819 1 89.25 ? H30 LH9 610 A 1 HETATM 41 H H31 LH9 . . . K 3 3.799 -4.505 32.536 1 89.25 ? H31 LH9 610 A 1 HETATM 42 H H32 LH9 . . . K 3 6.769 -7.383 33.121 1 93.92 ? H32 LH9 610 A 1 HETATM 43 H H33 LH9 . . . K 3 5.916 -7.958 34.572 1 93.92 ? H33 LH9 610 A 1 HETATM 44 H H34 LH9 . . . K 3 7.932 -5.563 34.375 1 94.59 ? H34 LH9 610 A 1 HETATM 45 H H5 LH9 . . . K 3 -3.123 3.364 27.988 1 79.99 ? H5 LH9 610 A 1 HETATM 46 H H4 LH9 . . . K 3 -4.259 2.132 28.499 1 79.99 ? H4 LH9 610 A 1 HETATM 47 H H36 LH9 . . . K 3 9.13 -7.549 35.096 1 95.37 ? H36 LH9 610 A 1 HETATM 48 H H35 LH9 . . . K 3 7.725 -8.227 35.959 1 95.37 ? H35 LH9 610 A 1 HETATM 49 H H7 LH9 . . . K 3 -3.761 0.714 26.723 1 79.8 ? H7 LH9 610 A 1 HETATM 50 H H6 LH9 . . . K 3 -3.754 2.018 25.549 1 79.8 ? H6 LH9 610 A 1 HETATM 51 H H8 LH9 . . . K 3 -1.44 1.344 27.495 1 79.88 ? H8 LH9 610 A 1 HETATM 52 H H9 LH9 . . . K 3 -1.429 2.728 26.416 1 79.88 ? H9 LH9 610 A 1 HETATM 53 H H11 LH9 . . . K 3 -2.029 0.457 24.729 1 80.05 ? H11 LH9 610 A 1 HETATM 54 H H10 LH9 . . . K 3 -0.579 1.442 24.729 1 80.05 ? H10 LH9 610 A 1 HETATM 55 H H13 LH9 . . . K 3 0.476 -0.537 25.199 1 80.57 ? H13 LH9 610 A 1 HETATM 56 H H12 LH9 . . . K 3 0.058 -0.143 26.856 1 80.57 ? H12 LH9 610 A 1 HETATM 57 H H15 LH9 . . . K 3 -2.191 -1.469 26.354 1 81.18 ? H15 LH9 610 A 1 HETATM 58 H H14 LH9 . . . K 3 -1.322 -2.109 24.968 1 81.18 ? H14 LH9 610 A 1 HETATM 59 H H39 LH9 . . . K 3 -0.26 -2.431 27.85 1 82.25 ? H39 LH9 610 A 1 HETATM 60 H H17 LH9 . . . K 3 -1.263 -4.786 26.558 1 83.5 ? H17 LH9 610 A 1 HETATM 61 H H37 LH9 . . . K 3 7.093 -5.204 36.553 1 94.56 ? H37 LH9 610 A 1 HETATM 62 H H38 LH9 . . . K 3 9.236 -7.199 37.343 1 95.64 ? H38 LH9 610 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 62 #