data_7ACI # _model_server_result.job_id zpQpONRgu1BDf9BmaT1Bzw _model_server_result.datetime_utc '2024-11-26 15:49:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aci # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":612}' # _entry.id 7ACI # _exptl.entry_id 7ACI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 342.513 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{S})-2,3-bis(oxidanyl)propyl] heptadec-9-enoate' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ACI _cell.length_a 48.775 _cell.length_b 76.173 _cell.length_c 156.531 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ACI _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (y,z,x)' _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N # _chem_comp.formula 'C20 H38 O4' _chem_comp.formula_weight 342.513 _chem_comp.id LH9 _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{S})-2,3-bis(oxidanyl)propyl] heptadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C20 LH9 sing 207 n n C20 C19 LH9 sing 208 n n C19 O3 LH9 sing 209 n n C19 C18 LH9 sing 210 n n C18 O2 LH9 sing 211 n n O2 C17 LH9 sing 212 n n C17 O1 LH9 doub 213 n n C17 C16 LH9 sing 214 n n C16 C15 LH9 sing 215 n n C15 C14 LH9 sing 216 n n C14 C13 LH9 sing 217 n n C13 C12 LH9 sing 218 n n C12 C11 LH9 sing 219 n n C11 C10 LH9 sing 220 n n C10 C9 LH9 sing 221 n n C9 C8 LH9 doub 222 e n C8 C7 LH9 sing 223 n n C7 C6 LH9 sing 224 n n C5 C6 LH9 sing 225 n n C5 C4 LH9 sing 226 n n C4 C3 LH9 sing 227 n n C3 C2 LH9 sing 228 n n C2 C1 LH9 sing 229 n n C1 H1 LH9 sing 230 n n C1 H3 LH9 sing 231 n n C1 H2 LH9 sing 232 n n C10 H19 LH9 sing 233 n n C10 H18 LH9 sing 234 n n C11 H20 LH9 sing 235 n n C11 H21 LH9 sing 236 n n C12 H23 LH9 sing 237 n n C12 H22 LH9 sing 238 n n C13 H24 LH9 sing 239 n n C13 H25 LH9 sing 240 n n C14 H27 LH9 sing 241 n n C14 H26 LH9 sing 242 n n C15 H29 LH9 sing 243 n n C15 H28 LH9 sing 244 n n C16 H30 LH9 sing 245 n n C16 H31 LH9 sing 246 n n C18 H32 LH9 sing 247 n n C18 H33 LH9 sing 248 n n C19 H34 LH9 sing 249 n n C2 H5 LH9 sing 250 n n C2 H4 LH9 sing 251 n n C20 H36 LH9 sing 252 n n C20 H35 LH9 sing 253 n n C3 H7 LH9 sing 254 n n C3 H6 LH9 sing 255 n n C4 H8 LH9 sing 256 n n C4 H9 LH9 sing 257 n n C5 H11 LH9 sing 258 n n C5 H10 LH9 sing 259 n n C6 H13 LH9 sing 260 n n C6 H12 LH9 sing 261 n n C7 H15 LH9 sing 262 n n C7 H14 LH9 sing 263 n n C8 H39 LH9 sing 264 n n C9 H17 LH9 sing 265 n n O3 H37 LH9 sing 266 n n O4 H38 LH9 sing 267 n n # _atom_sites.entry_id 7ACI _atom_sites.fract_transf_matrix[1][1] 0.020502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006389 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 601 1 GOL GOL . C 2 GOL A 1 602 2 GOL GOL . D 2 GOL A 1 603 3 GOL GOL . E 2 GOL A 1 604 4 GOL GOL . F 2 GOL A 1 605 5 GOL GOL . G 2 GOL A 1 606 6 GOL GOL . H 3 LH9 A 1 607 7 LH9 LH9 . I 3 LH9 A 1 608 8 LH9 LH9 . J 3 LH9 A 1 609 9 LH9 LH9 . K 3 LH9 A 1 610 10 LH9 LH9 . L 3 LH9 A 1 611 11 LH9 LH9 . M 3 LH9 A 1 612 12 LH9 LH9 . N 4 HOH A 1 701 66 HOH HOH . N 4 HOH A 2 702 20 HOH HOH . N 4 HOH A 3 703 57 HOH HOH . N 4 HOH A 4 704 53 HOH HOH . N 4 HOH A 5 705 65 HOH HOH . N 4 HOH A 6 706 68 HOH HOH . N 4 HOH A 7 707 73 HOH HOH . N 4 HOH A 8 708 43 HOH HOH . N 4 HOH A 9 709 23 HOH HOH . N 4 HOH A 10 710 31 HOH HOH . N 4 HOH A 11 711 5 HOH HOH . N 4 HOH A 12 712 26 HOH HOH . N 4 HOH A 13 713 30 HOH HOH . N 4 HOH A 14 714 60 HOH HOH . N 4 HOH A 15 715 18 HOH HOH . N 4 HOH A 16 716 24 HOH HOH . N 4 HOH A 17 717 13 HOH HOH . N 4 HOH A 18 718 50 HOH HOH . N 4 HOH A 19 719 41 HOH HOH . N 4 HOH A 20 720 33 HOH HOH . N 4 HOH A 21 721 71 HOH HOH . N 4 HOH A 22 722 6 HOH HOH . N 4 HOH A 23 723 3 HOH HOH . N 4 HOH A 24 724 15 HOH HOH . N 4 HOH A 25 725 29 HOH HOH . N 4 HOH A 26 726 64 HOH HOH . N 4 HOH A 27 727 25 HOH HOH . N 4 HOH A 28 728 8 HOH HOH . N 4 HOH A 29 729 69 HOH HOH . N 4 HOH A 30 730 11 HOH HOH . N 4 HOH A 31 731 35 HOH HOH . N 4 HOH A 32 732 27 HOH HOH . N 4 HOH A 33 733 12 HOH HOH . N 4 HOH A 34 734 61 HOH HOH . N 4 HOH A 35 735 28 HOH HOH . N 4 HOH A 36 736 21 HOH HOH . N 4 HOH A 37 737 4 HOH HOH . N 4 HOH A 38 738 46 HOH HOH . N 4 HOH A 39 739 40 HOH HOH . N 4 HOH A 40 740 14 HOH HOH . N 4 HOH A 41 741 9 HOH HOH . N 4 HOH A 42 742 56 HOH HOH . N 4 HOH A 43 743 52 HOH HOH . N 4 HOH A 44 744 37 HOH HOH . N 4 HOH A 45 745 63 HOH HOH . N 4 HOH A 46 746 67 HOH HOH . N 4 HOH A 47 747 2 HOH HOH . N 4 HOH A 48 748 17 HOH HOH . N 4 HOH A 49 749 19 HOH HOH . N 4 HOH A 50 750 42 HOH HOH . N 4 HOH A 51 751 54 HOH HOH . N 4 HOH A 52 752 48 HOH HOH . N 4 HOH A 53 753 55 HOH HOH . N 4 HOH A 54 754 58 HOH HOH . N 4 HOH A 55 755 49 HOH HOH . N 4 HOH A 56 756 38 HOH HOH . N 4 HOH A 57 757 7 HOH HOH . N 4 HOH A 58 758 1 HOH HOH . N 4 HOH A 59 759 22 HOH HOH . N 4 HOH A 60 760 34 HOH HOH . N 4 HOH A 61 761 44 HOH HOH . N 4 HOH A 62 762 39 HOH HOH . N 4 HOH A 63 763 16 HOH HOH . N 4 HOH A 64 764 32 HOH HOH . N 4 HOH A 65 765 72 HOH HOH . N 4 HOH A 66 766 59 HOH HOH . N 4 HOH A 67 767 70 HOH HOH . N 4 HOH A 68 768 62 HOH HOH . N 4 HOH A 69 769 36 HOH HOH . N 4 HOH A 70 770 51 HOH HOH . N 4 HOH A 71 771 10 HOH HOH . N 4 HOH A 72 772 47 HOH HOH . N 4 HOH A 73 773 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LH9 . . . M 3 16.205 13.143 -2.361 1 62.8 ? C1 LH9 612 A 1 HETATM 2 C C10 LH9 . . . M 3 17.585 3.661 4.113 1 77.17 ? C10 LH9 612 A 1 HETATM 3 C C11 LH9 . . . M 3 16.963 2.263 4.524 1 77.67 ? C11 LH9 612 A 1 HETATM 4 C C12 LH9 . . . M 3 17.603 0.957 3.85 1 78.19 ? C12 LH9 612 A 1 HETATM 5 C C13 LH9 . . . M 3 17.474 -0.407 4.655 1 78.52 ? C13 LH9 612 A 1 HETATM 6 C C14 LH9 . . . M 3 17.997 -1.747 3.966 1 78.96 ? C14 LH9 612 A 1 HETATM 7 C C15 LH9 . . . M 3 17.999 -3.029 4.896 1 79.43 ? C15 LH9 612 A 1 HETATM 8 C C16 LH9 . . . M 3 19.085 -4.153 4.618 1 79.99 ? C16 LH9 612 A 1 HETATM 9 C C17 LH9 . . . M 3 19.035 -5.313 5.647 1 80.66 ? C17 LH9 612 A 1 HETATM 10 C C18 LH9 . . . M 3 20.07 -7.413 6.35 1 81.07 ? C18 LH9 612 A 1 HETATM 11 C C19 LH9 . . . M 3 21.458 -8.184 6.367 1 80.87 ? C19 LH9 612 A 1 HETATM 12 C C2 LH9 . . . M 3 16.05 11.679 -1.922 1 63.69 ? C2 LH9 612 A 1 HETATM 13 C C20 LH9 . . . M 3 21.424 -9.551 7.145 1 79.93 ? C20 LH9 612 A 1 HETATM 14 C C3 LH9 . . . M 3 17.171 11.167 -0.963 1 64.86 ? C3 LH9 612 A 1 HETATM 15 C C4 LH9 . . . M 3 16.872 9.762 -0.34 1 66.41 ? C4 LH9 612 A 1 HETATM 16 C C5 LH9 . . . M 3 17.789 9.305 0.866 1 67.9 ? C5 LH9 612 A 1 HETATM 17 C C6 LH9 . . . M 3 17.065 8.399 1.945 1 69.87 ? C6 LH9 612 A 1 HETATM 18 C C7 LH9 . . . M 3 17.709 6.998 2.281 1 72.12 ? C7 LH9 612 A 1 HETATM 19 C C8 LH9 . . . M 3 16.866 5.967 3.102 1 74.21 ? C8 LH9 612 A 1 HETATM 20 C C9 LH9 . . . M 3 16.949 4.62 3.059 1 76.1 ? C9 LH9 612 A 1 HETATM 21 O O1 LH9 . . . M 3 18.06 -5.58 6.291 1 80.82 ? O1 LH9 612 A 1 HETATM 22 O O2 LH9 . . . M 3 20.193 -6.069 5.808 1 81.22 ? O2 LH9 612 A 1 HETATM 23 O O3 LH9 . . . M 3 22.313 -7.359 7.106 1 81.64 ? O3 LH9 612 A 1 HETATM 24 O O4 LH9 . . . M 3 22.748 -10.024 7.171 1 79.16 ? O4 LH9 612 A 1 HETATM 25 H H1 LH9 . . . M 3 16.036 13.864 -1.551 1 75.47 ? H1 LH9 612 A 1 HETATM 26 H H3 LH9 . . . M 3 17.204 13.38 -2.751 1 75.47 ? H3 LH9 612 A 1 HETATM 27 H H2 LH9 . . . M 3 15.509 13.438 -3.157 1 75.47 ? H2 LH9 612 A 1 HETATM 28 H H19 LH9 . . . M 3 18.618 3.454 3.78 1 92.72 ? H19 LH9 612 A 1 HETATM 29 H H18 LH9 . . . M 3 17.694 4.238 5.05 1 92.72 ? H18 LH9 612 A 1 HETATM 30 H H20 LH9 . . . M 3 15.877 2.276 4.303 1 93.31 ? H20 LH9 612 A 1 HETATM 31 H H21 LH9 . . . M 3 17.022 2.155 5.625 1 93.31 ? H21 LH9 612 A 1 HETATM 32 H H23 LH9 . . . M 3 18.675 1.149 3.651 1 93.94 ? H23 LH9 612 A 1 HETATM 33 H H22 LH9 . . . M 3 17.152 0.818 2.848 1 93.94 ? H22 LH9 612 A 1 HETATM 34 H H24 LH9 . . . M 3 17.996 -0.29 5.622 1 94.34 ? H24 LH9 612 A 1 HETATM 35 H H25 LH9 . . . M 3 16.414 -0.551 4.928 1 94.34 ? H25 LH9 612 A 1 HETATM 36 H H27 LH9 . . . M 3 17.386 -1.957 3.066 1 94.86 ? H27 LH9 612 A 1 HETATM 37 H H26 LH9 . . . M 3 19.024 -1.583 3.58 1 94.86 ? H26 LH9 612 A 1 HETATM 38 H H29 LH9 . . . M 3 18.105 -2.707 5.949 1 95.42 ? H29 LH9 612 A 1 HETATM 39 H H28 LH9 . . . M 3 16.999 -3.504 4.851 1 95.42 ? H28 LH9 612 A 1 HETATM 40 H H30 LH9 . . . M 3 20.113 -3.732 4.625 1 96.09 ? H30 LH9 612 A 1 HETATM 41 H H31 LH9 . . . M 3 18.964 -4.589 3.603 1 96.09 ? H31 LH9 612 A 1 HETATM 42 H H32 LH9 . . . M 3 19.324 -7.977 5.748 1 97.4 ? H32 LH9 612 A 1 HETATM 43 H H33 LH9 . . . M 3 19.654 -7.348 7.379 1 97.4 ? H33 LH9 612 A 1 HETATM 44 H H34 LH9 . . . M 3 21.78 -8.39 5.317 1 97.16 ? H34 LH9 612 A 1 HETATM 45 H H5 LH9 . . . M 3 15.051 11.567 -1.453 1 76.54 ? H5 LH9 612 A 1 HETATM 46 H H4 LH9 . . . M 3 15.997 11.052 -2.835 1 76.54 ? H4 LH9 612 A 1 HETATM 47 H H36 LH9 . . . M 3 20.758 -10.291 6.647 1 96.03 ? H36 LH9 612 A 1 HETATM 48 H H35 LH9 . . . M 3 21.037 -9.426 8.181 1 96.03 ? H35 LH9 612 A 1 HETATM 49 H H7 LH9 . . . M 3 18.129 11.148 -1.519 1 77.94 ? H7 LH9 612 A 1 HETATM 50 H H6 LH9 . . . M 3 17.325 11.92 -0.165 1 77.94 ? H6 LH9 612 A 1 HETATM 51 H H8 LH9 . . . M 3 16.931 9.009 -1.15 1 79.8 ? H8 LH9 612 A 1 HETATM 52 H H9 LH9 . . . M 3 15.812 9.749 -0.019 1 79.8 ? H9 LH9 612 A 1 HETATM 53 H H11 LH9 . . . M 3 18.67 8.77 0.462 1 81.58 ? H11 LH9 612 A 1 HETATM 54 H H10 LH9 . . . M 3 18.208 10.205 1.357 1 81.58 ? H10 LH9 612 A 1 HETATM 55 H H13 LH9 . . . M 3 16.979 8.991 2.875 1 83.95 ? H13 LH9 612 A 1 HETATM 56 H H12 LH9 . . . M 3 16.022 8.247 1.608 1 83.95 ? H12 LH9 612 A 1 HETATM 57 H H15 LH9 . . . M 3 18.007 6.534 1.323 1 86.65 ? H15 LH9 612 A 1 HETATM 58 H H14 LH9 . . . M 3 18.657 7.191 2.816 1 86.65 ? H14 LH9 612 A 1 HETATM 59 H H39 LH9 . . . M 3 16.15 6.461 3.764 1 89.17 ? H39 LH9 612 A 1 HETATM 60 H H17 LH9 . . . M 3 16.538 4.073 2.206 1 91.43 ? H17 LH9 612 A 1 HETATM 61 H H37 LH9 . . . M 3 22.851 -7.919 7.671 1 98.07 ? H37 LH9 612 A 1 HETATM 62 H H38 LH9 . . . M 3 22.735 -10.873 7.614 1 95.11 ? H38 LH9 612 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 62 #