data_7ADS
#
_model_server_result.job_id            FI3V_gR8ZoV3PwLvqyhH-A 
_model_server_result.datetime_utc      '2024-10-25 20:28:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ads 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":309}' 
#
_entry.id    7ADS 
#
_exptl.entry_id    7ADS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7ADS 
_cell.length_a            106.613 
_cell.length_b            106.613 
_cell.length_c            60.589 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ADS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    'P 62 2 (x,y,z+1/3)' 
_symmetry.space_group_name_H-M     'P 62 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_555 -x+y,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLN 33 A GLN 28 1_555 P MG MG . A MG 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.987 ? 
metalc ? metalc2 A OG SER 54 A SER 49 1_555 K NA NA . A NA 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.904 ? 
metalc ? metalc3 A OG SER 54 A SER 49 1_555 K NA NA . A NA 310 7_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.904 ? 
metalc ? metalc4 A O LEU 84 A LEU 79 1_555 L NA NA . A NA 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? 
metalc ? metalc5 A O ARG 126 A ARG 121 1_555 L NA NA . A NA 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? 
metalc ? metalc6 J NA NA . A NA 309 1_555 T O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7ADS 
_atom_sites.fract_transf_matrix[1][1]    0.00938 
_atom_sites.fract_transf_matrix[1][2]    0.005415 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010831 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016505 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 301 301 EDO EDO . 
C 2 EDO A 1 302 501 EDO EDO . 
D 2 EDO A 1 303 601 EDO EDO . 
E 2 EDO A 1 304 801 EDO EDO . 
F 2 EDO A 1 305 901 EDO EDO . 
G 2 EDO A 1 306 1101 EDO EDO . 
H 2 EDO A 1 307 1201 EDO EDO . 
I 3 NA A 1 308 3 NA NA . 
J 3 NA A 1 309 4 NA NA . 
K 3 NA A 1 310 6 NA NA . 
L 3 NA A 1 311 8 NA NA . 
M 3 NA A 1 312 10 NA NA . 
N 4 CL A 1 313 1 CL CL . 
O 4 CL A 1 314 2 CL CL . 
P 5 MG A 1 315 1 MG MG . 
Q 5 MG A 1 316 2 MG MG . 
R 5 MG A 1 317 3 MG MG . 
S 5 MG A 1 318 4 MG MG . 
T 6 HOH A 1 401 35 HOH HOH . 
T 6 HOH A 2 402 1 HOH HOH . 
T 6 HOH A 3 403 20 HOH HOH . 
T 6 HOH A 4 404 23 HOH HOH . 
T 6 HOH A 5 405 36 HOH HOH . 
T 6 HOH A 6 406 34 HOH HOH . 
T 6 HOH A 7 407 9 HOH HOH . 
T 6 HOH A 8 408 18 HOH HOH . 
T 6 HOH A 9 409 32 HOH HOH . 
T 6 HOH A 10 410 7 HOH HOH . 
T 6 HOH A 11 411 42 HOH HOH . 
T 6 HOH A 12 412 47 HOH HOH . 
T 6 HOH A 13 413 5 HOH HOH . 
T 6 HOH A 14 414 24 HOH HOH . 
T 6 HOH A 15 415 49 HOH HOH . 
T 6 HOH A 16 416 51 HOH HOH . 
T 6 HOH A 17 417 28 HOH HOH . 
T 6 HOH A 18 418 31 HOH HOH . 
T 6 HOH A 19 419 19 HOH HOH . 
T 6 HOH A 20 420 37 HOH HOH . 
T 6 HOH A 21 421 44 HOH HOH . 
T 6 HOH A 22 422 14 HOH HOH . 
T 6 HOH A 23 423 45 HOH HOH . 
T 6 HOH A 24 424 25 HOH HOH . 
T 6 HOH A 25 425 52 HOH HOH . 
T 6 HOH A 26 426 46 HOH HOH . 
T 6 HOH A 27 427 29 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -6.199 
_atom_site.Cartn_y               35.714 
_atom_site.Cartn_z               -13.871 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        105.5 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           309 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           49 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#