data_7AGA
#
_model_server_result.job_id            JeM-jBlqTSKWNFo4-spgUQ 
_model_server_result.datetime_utc      '2024-11-07 18:43:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7aga 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    7AGA 
#
_exptl.entry_id    7AGA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.673 
_cell.angle_gamma         90 
_cell.entry_id            7AGA 
_cell.length_a            112.372 
_cell.length_b            52.641 
_cell.length_c            44.585 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AGA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7AGA 
_atom_sites.fract_transf_matrix[1][1]    0.008899 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002001 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018997 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022989 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 LZE A 1 401 1 LZE LZE . 
C 3 CL A 1 402 1 CL CL . 
D 3 CL A 1 403 2 CL CL . 
E 4 DMS A 1 404 1 DMS DMS . 
F 4 DMS A 1 405 3 DMS DMS . 
G 4 DMS A 1 406 4 DMS DMS . 
H 4 DMS A 1 407 5 DMS DMS . 
I 4 DMS A 1 408 6 DMS DMS . 
J 4 DMS A 1 409 7 DMS DMS . 
K 4 DMS A 1 410 8 DMS DMS . 
L 4 DMS A 1 411 9 DMS DMS . 
M 5 HOH A 1 501 457 HOH HOH . 
M 5 HOH A 2 502 350 HOH HOH . 
M 5 HOH A 3 503 504 HOH HOH . 
M 5 HOH A 4 504 364 HOH HOH . 
M 5 HOH A 5 505 367 HOH HOH . 
M 5 HOH A 6 506 533 HOH HOH . 
M 5 HOH A 7 507 455 HOH HOH . 
M 5 HOH A 8 508 541 HOH HOH . 
M 5 HOH A 9 509 410 HOH HOH . 
M 5 HOH A 10 510 436 HOH HOH . 
M 5 HOH A 11 511 55 HOH HOH . 
M 5 HOH A 12 512 105 HOH HOH . 
M 5 HOH A 13 513 499 HOH HOH . 
M 5 HOH A 14 514 10 HOH HOH . 
M 5 HOH A 15 515 63 HOH HOH . 
M 5 HOH A 16 516 437 HOH HOH . 
M 5 HOH A 17 517 1 HOH HOH . 
M 5 HOH A 18 518 396 HOH HOH . 
M 5 HOH A 19 519 56 HOH HOH . 
M 5 HOH A 20 520 46 HOH HOH . 
M 5 HOH A 21 521 494 HOH HOH . 
M 5 HOH A 22 522 435 HOH HOH . 
M 5 HOH A 23 523 433 HOH HOH . 
M 5 HOH A 24 524 514 HOH HOH . 
M 5 HOH A 25 525 26 HOH HOH . 
M 5 HOH A 26 526 320 HOH HOH . 
M 5 HOH A 27 527 17 HOH HOH . 
M 5 HOH A 28 528 475 HOH HOH . 
M 5 HOH A 29 529 171 HOH HOH . 
M 5 HOH A 30 530 4 HOH HOH . 
M 5 HOH A 31 531 60 HOH HOH . 
M 5 HOH A 32 532 6 HOH HOH . 
M 5 HOH A 33 533 180 HOH HOH . 
M 5 HOH A 34 534 68 HOH HOH . 
M 5 HOH A 35 535 420 HOH HOH . 
M 5 HOH A 36 536 12 HOH HOH . 
M 5 HOH A 37 537 329 HOH HOH . 
M 5 HOH A 38 538 34 HOH HOH . 
M 5 HOH A 39 539 390 HOH HOH . 
M 5 HOH A 40 540 47 HOH HOH . 
M 5 HOH A 41 541 87 HOH HOH . 
M 5 HOH A 42 542 16 HOH HOH . 
M 5 HOH A 43 543 326 HOH HOH . 
M 5 HOH A 44 544 422 HOH HOH . 
M 5 HOH A 45 545 9 HOH HOH . 
M 5 HOH A 46 546 82 HOH HOH . 
M 5 HOH A 47 547 348 HOH HOH . 
M 5 HOH A 48 548 91 HOH HOH . 
M 5 HOH A 49 549 42 HOH HOH . 
M 5 HOH A 50 550 429 HOH HOH . 
M 5 HOH A 51 551 402 HOH HOH . 
M 5 HOH A 52 552 321 HOH HOH . 
M 5 HOH A 53 553 453 HOH HOH . 
M 5 HOH A 54 554 366 HOH HOH . 
M 5 HOH A 55 555 28 HOH HOH . 
M 5 HOH A 56 556 534 HOH HOH . 
M 5 HOH A 57 557 72 HOH HOH . 
M 5 HOH A 58 558 5 HOH HOH . 
M 5 HOH A 59 559 38 HOH HOH . 
M 5 HOH A 60 560 426 HOH HOH . 
M 5 HOH A 61 561 70 HOH HOH . 
M 5 HOH A 62 562 385 HOH HOH . 
M 5 HOH A 63 563 450 HOH HOH . 
M 5 HOH A 64 564 460 HOH HOH . 
M 5 HOH A 65 565 31 HOH HOH . 
M 5 HOH A 66 566 482 HOH HOH . 
M 5 HOH A 67 567 537 HOH HOH . 
M 5 HOH A 68 568 66 HOH HOH . 
M 5 HOH A 69 569 128 HOH HOH . 
M 5 HOH A 70 570 465 HOH HOH . 
M 5 HOH A 71 571 23 HOH HOH . 
M 5 HOH A 72 572 536 HOH HOH . 
M 5 HOH A 73 573 345 HOH HOH . 
M 5 HOH A 74 574 381 HOH HOH . 
M 5 HOH A 75 575 65 HOH HOH . 
M 5 HOH A 76 576 417 HOH HOH . 
M 5 HOH A 77 577 103 HOH HOH . 
M 5 HOH A 78 578 404 HOH HOH . 
M 5 HOH A 79 579 373 HOH HOH . 
M 5 HOH A 80 580 21 HOH HOH . 
M 5 HOH A 81 581 29 HOH HOH . 
M 5 HOH A 82 582 539 HOH HOH . 
M 5 HOH A 83 583 48 HOH HOH . 
M 5 HOH A 84 584 146 HOH HOH . 
M 5 HOH A 85 585 77 HOH HOH . 
M 5 HOH A 86 586 440 HOH HOH . 
M 5 HOH A 87 587 507 HOH HOH . 
M 5 HOH A 88 588 88 HOH HOH . 
M 5 HOH A 89 589 122 HOH HOH . 
M 5 HOH A 90 590 458 HOH HOH . 
M 5 HOH A 91 591 531 HOH HOH . 
M 5 HOH A 92 592 54 HOH HOH . 
M 5 HOH A 93 593 7 HOH HOH . 
M 5 HOH A 94 594 20 HOH HOH . 
M 5 HOH A 95 595 81 HOH HOH . 
M 5 HOH A 96 596 84 HOH HOH . 
M 5 HOH A 97 597 474 HOH HOH . 
M 5 HOH A 98 598 490 HOH HOH . 
M 5 HOH A 99 599 11 HOH HOH . 
M 5 HOH A 100 600 2 HOH HOH . 
M 5 HOH A 101 601 486 HOH HOH . 
M 5 HOH A 102 602 353 HOH HOH . 
M 5 HOH A 103 603 74 HOH HOH . 
M 5 HOH A 104 604 529 HOH HOH . 
M 5 HOH A 105 605 78 HOH HOH . 
M 5 HOH A 106 606 25 HOH HOH . 
M 5 HOH A 107 607 512 HOH HOH . 
M 5 HOH A 108 608 463 HOH HOH . 
M 5 HOH A 109 609 344 HOH HOH . 
M 5 HOH A 110 610 362 HOH HOH . 
M 5 HOH A 111 611 406 HOH HOH . 
M 5 HOH A 112 612 528 HOH HOH . 
M 5 HOH A 113 613 467 HOH HOH . 
M 5 HOH A 114 614 325 HOH HOH . 
M 5 HOH A 115 615 58 HOH HOH . 
M 5 HOH A 116 616 495 HOH HOH . 
M 5 HOH A 117 617 370 HOH HOH . 
M 5 HOH A 118 618 18 HOH HOH . 
M 5 HOH A 119 619 456 HOH HOH . 
M 5 HOH A 120 620 415 HOH HOH . 
M 5 HOH A 121 621 355 HOH HOH . 
M 5 HOH A 122 622 98 HOH HOH . 
M 5 HOH A 123 623 338 HOH HOH . 
M 5 HOH A 124 624 340 HOH HOH . 
M 5 HOH A 125 625 141 HOH HOH . 
M 5 HOH A 126 626 339 HOH HOH . 
M 5 HOH A 127 627 322 HOH HOH . 
M 5 HOH A 128 628 337 HOH HOH . 
M 5 HOH A 129 629 330 HOH HOH . 
M 5 HOH A 130 630 193 HOH HOH . 
M 5 HOH A 131 631 8 HOH HOH . 
M 5 HOH A 132 632 71 HOH HOH . 
M 5 HOH A 133 633 416 HOH HOH . 
M 5 HOH A 134 634 378 HOH HOH . 
M 5 HOH A 135 635 379 HOH HOH . 
M 5 HOH A 136 636 354 HOH HOH . 
M 5 HOH A 137 637 22 HOH HOH . 
M 5 HOH A 138 638 409 HOH HOH . 
M 5 HOH A 139 639 118 HOH HOH . 
M 5 HOH A 140 640 59 HOH HOH . 
M 5 HOH A 141 641 3 HOH HOH . 
M 5 HOH A 142 642 412 HOH HOH . 
M 5 HOH A 143 643 94 HOH HOH . 
M 5 HOH A 144 644 363 HOH HOH . 
M 5 HOH A 145 645 328 HOH HOH . 
M 5 HOH A 146 646 44 HOH HOH . 
M 5 HOH A 147 647 300 HOH HOH . 
M 5 HOH A 148 648 377 HOH HOH . 
M 5 HOH A 149 649 391 HOH HOH . 
M 5 HOH A 150 650 401 HOH HOH . 
M 5 HOH A 151 651 341 HOH HOH . 
M 5 HOH A 152 652 400 HOH HOH . 
M 5 HOH A 153 653 505 HOH HOH . 
M 5 HOH A 154 654 273 HOH HOH . 
M 5 HOH A 155 655 380 HOH HOH . 
M 5 HOH A 156 656 83 HOH HOH . 
M 5 HOH A 157 657 452 HOH HOH . 
M 5 HOH A 158 658 476 HOH HOH . 
M 5 HOH A 159 659 324 HOH HOH . 
M 5 HOH A 160 660 76 HOH HOH . 
M 5 HOH A 161 661 346 HOH HOH . 
M 5 HOH A 162 662 532 HOH HOH . 
M 5 HOH A 163 663 447 HOH HOH . 
M 5 HOH A 164 664 40 HOH HOH . 
M 5 HOH A 165 665 405 HOH HOH . 
M 5 HOH A 166 666 365 HOH HOH . 
M 5 HOH A 167 667 274 HOH HOH . 
M 5 HOH A 168 668 451 HOH HOH . 
M 5 HOH A 169 669 357 HOH HOH . 
M 5 HOH A 170 670 471 HOH HOH . 
M 5 HOH A 171 671 39 HOH HOH . 
M 5 HOH A 172 672 359 HOH HOH . 
M 5 HOH A 173 673 14 HOH HOH . 
M 5 HOH A 174 674 540 HOH HOH . 
M 5 HOH A 175 675 408 HOH HOH . 
M 5 HOH A 176 676 319 HOH HOH . 
M 5 HOH A 177 677 430 HOH HOH . 
M 5 HOH A 178 678 419 HOH HOH . 
M 5 HOH A 179 679 45 HOH HOH . 
M 5 HOH A 180 680 395 HOH HOH . 
M 5 HOH A 181 681 473 HOH HOH . 
M 5 HOH A 182 682 407 HOH HOH . 
M 5 HOH A 183 683 477 HOH HOH . 
M 5 HOH A 184 684 538 HOH HOH . 
M 5 HOH A 185 685 506 HOH HOH . 
M 5 HOH A 186 686 414 HOH HOH . 
M 5 HOH A 187 687 374 HOH HOH . 
M 5 HOH A 188 688 492 HOH HOH . 
M 5 HOH A 189 689 331 HOH HOH . 
M 5 HOH A 190 690 388 HOH HOH . 
M 5 HOH A 191 691 351 HOH HOH . 
M 5 HOH A 192 692 392 HOH HOH . 
M 5 HOH A 193 693 480 HOH HOH . 
M 5 HOH A 194 694 413 HOH HOH . 
M 5 HOH A 195 695 527 HOH HOH . 
M 5 HOH A 196 696 393 HOH HOH . 
M 5 HOH A 197 697 327 HOH HOH . 
M 5 HOH A 198 698 519 HOH HOH . 
M 5 HOH A 199 699 397 HOH HOH . 
M 5 HOH A 200 700 253 HOH HOH . 
M 5 HOH A 201 701 375 HOH HOH . 
M 5 HOH A 202 702 387 HOH HOH . 
M 5 HOH A 203 703 335 HOH HOH . 
M 5 HOH A 204 704 535 HOH HOH . 
M 5 HOH A 205 705 487 HOH HOH . 
M 5 HOH A 206 706 501 HOH HOH . 
M 5 HOH A 207 707 427 HOH HOH . 
M 5 HOH A 208 708 371 HOH HOH . 
M 5 HOH A 209 709 530 HOH HOH . 
M 5 HOH A 210 710 376 HOH HOH . 
M 5 HOH A 211 711 80 HOH HOH . 
M 5 HOH A 212 712 462 HOH HOH . 
M 5 HOH A 213 713 336 HOH HOH . 
M 5 HOH A 214 714 349 HOH HOH . 
M 5 HOH A 215 715 213 HOH HOH . 
M 5 HOH A 216 716 69 HOH HOH . 
M 5 HOH A 217 717 461 HOH HOH . 
M 5 HOH A 218 718 470 HOH HOH . 
M 5 HOH A 219 719 73 HOH HOH . 
M 5 HOH A 220 720 448 HOH HOH . 
M 5 HOH A 221 721 352 HOH HOH . 
M 5 HOH A 222 722 247 HOH HOH . 
M 5 HOH A 223 723 136 HOH HOH . 
M 5 HOH A 224 724 421 HOH HOH . 
M 5 HOH A 225 725 441 HOH HOH . 
M 5 HOH A 226 726 518 HOH HOH . 
M 5 HOH A 227 727 368 HOH HOH . 
M 5 HOH A 228 728 418 HOH HOH . 
M 5 HOH A 229 729 369 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . E 4 6.088 -0.995 -6.337 1 47.61 ? S DMS 404 A 1 
HETATM 2 O O DMS . . . E 4 6.946 -0.606 -7.487 1 47.92 ? O DMS 404 A 1 
HETATM 3 C C1 DMS . . . E 4 5.741 -2.767 -6.361 1 48.52 ? C1 DMS 404 A 1 
HETATM 4 C C2 DMS . . . E 4 7.076 -0.886 -4.809 1 48.12 ? C2 DMS 404 A 1 
HETATM 5 H H11 DMS . . . E 4 5.246 -3.018 -7.263 1 58.23 ? H11 DMS 404 A 1 
HETATM 6 H H12 DMS . . . E 4 5.123 -3.018 -5.538 1 58.23 ? H12 DMS 404 A 1 
HETATM 7 H H13 DMS . . . E 4 6.65 -3.307 -6.296 1 58.23 ? H13 DMS 404 A 1 
HETATM 8 H H21 DMS . . . E 4 7.249 0.131 -4.571 1 57.74 ? H21 DMS 404 A 1 
HETATM 9 H H22 DMS . . . E 4 8.003 -1.377 -4.953 1 57.74 ? H22 DMS 404 A 1 
HETATM 10 H H23 DMS . . . E 4 6.551 -1.35 -4.015 1 57.74 ? H23 DMS 404 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#