data_7AGH # _model_server_result.job_id YI6GPwOwDlnpyHrlrwA_ng _model_server_result.datetime_utc '2025-01-08 10:45:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7agh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":402}' # _entry.id 7AGH # _exptl.entry_id 7AGH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AGH _cell.length_a 82.085 _cell.length_b 82.224 _cell.length_c 170.97 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AGH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,K,L,O 1 1 C,I,J,N 2 1 B,G,H,M 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_355 -x-3/2,-y,z+1/2 -1 0 0 0 -1 0 0 0 1 -123.1275 0 85.485 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 162 C ASP 162 1_555 F MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc2 E O1G ANP . C ANP 401 1_555 F MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc3 E O2B ANP . C ANP 401 1_555 F MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc4 B OD2 ASP 162 D ASP 162 1_555 H MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc5 G O2G ANP . D ANP 401 1_555 H MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc6 G O2B ANP . D ANP 401 1_555 H MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc7 I O1A ANP . A ANP 401 1_555 J MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7AGH _atom_sites.fract_transf_matrix[1][1] 0.012182 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012162 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ANP C 1 401 301 ANP ANP . F 3 MG C 1 402 1 MG MG . G 2 ANP D 1 401 301 ANP ANP . H 3 MG D 1 402 2 MG MG . I 2 ANP A 1 401 301 ANP ANP . J 3 MG A 1 402 3 MG MG . K 2 ANP B 1 401 301 ANP ANP . L 4 HOH C 1 501 41 HOH HOH . L 4 HOH C 2 502 18 HOH HOH . L 4 HOH C 3 503 42 HOH HOH . L 4 HOH C 4 504 49 HOH HOH . L 4 HOH C 5 505 62 HOH HOH . L 4 HOH C 6 506 43 HOH HOH . L 4 HOH C 7 507 61 HOH HOH . L 4 HOH C 8 508 52 HOH HOH . L 4 HOH C 9 509 53 HOH HOH . L 4 HOH C 10 510 3 HOH HOH . L 4 HOH C 11 511 60 HOH HOH . L 4 HOH C 12 512 4 HOH HOH . M 4 HOH D 1 501 21 HOH HOH . M 4 HOH D 2 502 46 HOH HOH . M 4 HOH D 3 503 36 HOH HOH . M 4 HOH D 4 504 29 HOH HOH . M 4 HOH D 5 505 25 HOH HOH . M 4 HOH D 6 506 38 HOH HOH . M 4 HOH D 7 507 28 HOH HOH . M 4 HOH D 8 508 51 HOH HOH . M 4 HOH D 9 509 19 HOH HOH . M 4 HOH D 10 510 26 HOH HOH . M 4 HOH D 11 511 16 HOH HOH . M 4 HOH D 12 512 23 HOH HOH . M 4 HOH D 13 513 45 HOH HOH . M 4 HOH D 14 514 1 HOH HOH . M 4 HOH D 15 515 33 HOH HOH . M 4 HOH D 16 516 44 HOH HOH . M 4 HOH D 17 517 55 HOH HOH . M 4 HOH D 18 518 24 HOH HOH . M 4 HOH D 19 519 50 HOH HOH . N 4 HOH A 1 501 58 HOH HOH . N 4 HOH A 2 502 47 HOH HOH . O 4 HOH B 1 501 54 HOH HOH . O 4 HOH B 2 502 48 HOH HOH . O 4 HOH B 3 503 11 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x -59.684 _atom_site.Cartn_y -2.006 _atom_site.Cartn_z 124.391 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #