data_7AGP # _model_server_result.job_id '_Tu88n2pgyDPX9zRsGKCtQ' _model_server_result.datetime_utc '2024-11-14 20:52:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7agp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":901}' # _entry.id 7AGP # _exptl.entry_id 7AGP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AGP _cell.length_a 146.028 _cell.length_b 157.14 _cell.length_c 114.255 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AGP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 43 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 477 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 43 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 477 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.049 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7AGP _atom_sites.fract_transf_matrix[1][1] 0.006848 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008752 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 901 1 EDO EDO . D 2 EDO B 1 901 2 EDO EDO . E 3 HOH A 1 1001 13 HOH HOH . E 3 HOH A 2 1002 145 HOH HOH . E 3 HOH A 3 1003 101 HOH HOH . E 3 HOH A 4 1004 85 HOH HOH . E 3 HOH A 5 1005 59 HOH HOH . E 3 HOH A 6 1006 47 HOH HOH . E 3 HOH A 7 1007 38 HOH HOH . E 3 HOH A 8 1008 47 HOH HOH . E 3 HOH A 9 1009 149 HOH HOH . E 3 HOH A 10 1010 12 HOH HOH . E 3 HOH A 11 1011 124 HOH HOH . E 3 HOH A 12 1012 79 HOH HOH . E 3 HOH A 13 1013 52 HOH HOH . E 3 HOH A 14 1014 2 HOH HOH . E 3 HOH A 15 1015 14 HOH HOH . E 3 HOH A 16 1016 120 HOH HOH . E 3 HOH A 17 1017 87 HOH HOH . E 3 HOH A 18 1018 69 HOH HOH . E 3 HOH A 19 1019 205 HOH HOH . E 3 HOH A 20 1020 38 HOH HOH . E 3 HOH A 21 1021 81 HOH HOH . E 3 HOH A 22 1022 74 HOH HOH . E 3 HOH A 23 1023 93 HOH HOH . E 3 HOH A 24 1024 139 HOH HOH . E 3 HOH A 25 1025 27 HOH HOH . E 3 HOH A 26 1026 3 HOH HOH . E 3 HOH A 27 1027 44 HOH HOH . E 3 HOH A 28 1028 58 HOH HOH . E 3 HOH A 29 1029 99 HOH HOH . E 3 HOH A 30 1030 82 HOH HOH . E 3 HOH A 31 1031 153 HOH HOH . E 3 HOH A 32 1032 26 HOH HOH . E 3 HOH A 33 1033 132 HOH HOH . E 3 HOH A 34 1034 194 HOH HOH . E 3 HOH A 35 1035 19 HOH HOH . E 3 HOH A 36 1036 27 HOH HOH . E 3 HOH A 37 1037 94 HOH HOH . E 3 HOH A 38 1038 55 HOH HOH . E 3 HOH A 39 1039 37 HOH HOH . E 3 HOH A 40 1040 34 HOH HOH . E 3 HOH A 41 1041 5 HOH HOH . E 3 HOH A 42 1042 23 HOH HOH . E 3 HOH A 43 1043 50 HOH HOH . E 3 HOH A 44 1044 58 HOH HOH . E 3 HOH A 45 1045 83 HOH HOH . E 3 HOH A 46 1046 126 HOH HOH . E 3 HOH A 47 1047 109 HOH HOH . E 3 HOH A 48 1048 159 HOH HOH . E 3 HOH A 49 1049 13 HOH HOH . E 3 HOH A 50 1050 89 HOH HOH . E 3 HOH A 51 1051 39 HOH HOH . E 3 HOH A 52 1052 60 HOH HOH . E 3 HOH A 53 1053 135 HOH HOH . E 3 HOH A 54 1054 8 HOH HOH . E 3 HOH A 55 1055 209 HOH HOH . E 3 HOH A 56 1056 134 HOH HOH . E 3 HOH A 57 1057 92 HOH HOH . E 3 HOH A 58 1058 73 HOH HOH . E 3 HOH A 59 1059 57 HOH HOH . E 3 HOH A 60 1060 57 HOH HOH . E 3 HOH A 61 1061 79 HOH HOH . E 3 HOH A 62 1062 140 HOH HOH . E 3 HOH A 63 1063 113 HOH HOH . E 3 HOH A 64 1064 88 HOH HOH . E 3 HOH A 65 1065 112 HOH HOH . E 3 HOH A 66 1066 48 HOH HOH . E 3 HOH A 67 1067 49 HOH HOH . E 3 HOH A 68 1068 62 HOH HOH . E 3 HOH A 69 1069 10 HOH HOH . E 3 HOH A 70 1070 22 HOH HOH . E 3 HOH A 71 1071 95 HOH HOH . E 3 HOH A 72 1072 97 HOH HOH . E 3 HOH A 73 1073 56 HOH HOH . E 3 HOH A 74 1074 106 HOH HOH . E 3 HOH A 75 1075 129 HOH HOH . E 3 HOH A 76 1076 10 HOH HOH . E 3 HOH A 77 1077 90 HOH HOH . E 3 HOH A 78 1078 68 HOH HOH . E 3 HOH A 79 1079 37 HOH HOH . E 3 HOH A 80 1080 32 HOH HOH . E 3 HOH A 81 1081 106 HOH HOH . E 3 HOH A 82 1082 151 HOH HOH . E 3 HOH A 83 1083 72 HOH HOH . E 3 HOH A 84 1084 67 HOH HOH . E 3 HOH A 85 1085 6 HOH HOH . E 3 HOH A 86 1086 86 HOH HOH . E 3 HOH A 87 1087 72 HOH HOH . E 3 HOH A 88 1088 190 HOH HOH . E 3 HOH A 89 1089 43 HOH HOH . E 3 HOH A 90 1090 18 HOH HOH . E 3 HOH A 91 1091 41 HOH HOH . E 3 HOH A 92 1092 103 HOH HOH . E 3 HOH A 93 1093 12 HOH HOH . E 3 HOH A 94 1094 110 HOH HOH . E 3 HOH A 95 1095 63 HOH HOH . E 3 HOH A 96 1096 20 HOH HOH . E 3 HOH A 97 1097 78 HOH HOH . E 3 HOH A 98 1098 36 HOH HOH . E 3 HOH A 99 1099 108 HOH HOH . E 3 HOH A 100 1100 102 HOH HOH . E 3 HOH A 101 1101 111 HOH HOH . E 3 HOH A 102 1102 81 HOH HOH . E 3 HOH A 103 1103 77 HOH HOH . E 3 HOH A 104 1104 52 HOH HOH . E 3 HOH A 105 1105 84 HOH HOH . E 3 HOH A 106 1106 64 HOH HOH . E 3 HOH A 107 1107 75 HOH HOH . F 3 HOH B 1 1001 113 HOH HOH . F 3 HOH B 2 1002 60 HOH HOH . F 3 HOH B 3 1003 63 HOH HOH . F 3 HOH B 4 1004 103 HOH HOH . F 3 HOH B 5 1005 98 HOH HOH . F 3 HOH B 6 1006 11 HOH HOH . F 3 HOH B 7 1007 104 HOH HOH . F 3 HOH B 8 1008 64 HOH HOH . F 3 HOH B 9 1009 31 HOH HOH . F 3 HOH B 10 1010 30 HOH HOH . F 3 HOH B 11 1011 59 HOH HOH . F 3 HOH B 12 1012 24 HOH HOH . F 3 HOH B 13 1013 28 HOH HOH . F 3 HOH B 14 1014 95 HOH HOH . F 3 HOH B 15 1015 93 HOH HOH . F 3 HOH B 16 1016 105 HOH HOH . F 3 HOH B 17 1017 107 HOH HOH . F 3 HOH B 18 1018 34 HOH HOH . F 3 HOH B 19 1019 99 HOH HOH . F 3 HOH B 20 1020 5 HOH HOH . F 3 HOH B 21 1021 125 HOH HOH . F 3 HOH B 22 1022 16 HOH HOH . F 3 HOH B 23 1023 33 HOH HOH . F 3 HOH B 24 1024 43 HOH HOH . F 3 HOH B 25 1025 1 HOH HOH . F 3 HOH B 26 1026 32 HOH HOH . F 3 HOH B 27 1027 33 HOH HOH . F 3 HOH B 28 1028 107 HOH HOH . F 3 HOH B 29 1029 92 HOH HOH . F 3 HOH B 30 1030 101 HOH HOH . F 3 HOH B 31 1031 1 HOH HOH . F 3 HOH B 32 1032 21 HOH HOH . F 3 HOH B 33 1033 127 HOH HOH . F 3 HOH B 34 1034 96 HOH HOH . F 3 HOH B 35 1035 30 HOH HOH . F 3 HOH B 36 1036 56 HOH HOH . F 3 HOH B 37 1037 4 HOH HOH . F 3 HOH B 38 1038 40 HOH HOH . F 3 HOH B 39 1039 4 HOH HOH . F 3 HOH B 40 1040 7 HOH HOH . F 3 HOH B 41 1041 102 HOH HOH . F 3 HOH B 42 1042 19 HOH HOH . F 3 HOH B 43 1043 25 HOH HOH . F 3 HOH B 44 1044 50 HOH HOH . F 3 HOH B 45 1045 21 HOH HOH . F 3 HOH B 46 1046 122 HOH HOH . F 3 HOH B 47 1047 54 HOH HOH . F 3 HOH B 48 1048 15 HOH HOH . F 3 HOH B 49 1049 208 HOH HOH . F 3 HOH B 50 1050 9 HOH HOH . F 3 HOH B 51 1051 3 HOH HOH . F 3 HOH B 52 1052 70 HOH HOH . F 3 HOH B 53 1053 8 HOH HOH . F 3 HOH B 54 1054 9 HOH HOH . F 3 HOH B 55 1055 53 HOH HOH . F 3 HOH B 56 1056 131 HOH HOH . F 3 HOH B 57 1057 98 HOH HOH . F 3 HOH B 58 1058 136 HOH HOH . F 3 HOH B 59 1059 160 HOH HOH . F 3 HOH B 60 1060 65 HOH HOH . F 3 HOH B 61 1061 15 HOH HOH . F 3 HOH B 62 1062 14 HOH HOH . F 3 HOH B 63 1063 11 HOH HOH . F 3 HOH B 64 1064 40 HOH HOH . F 3 HOH B 65 1065 35 HOH HOH . F 3 HOH B 66 1066 28 HOH HOH . F 3 HOH B 67 1067 110 HOH HOH . F 3 HOH B 68 1068 25 HOH HOH . F 3 HOH B 69 1069 115 HOH HOH . F 3 HOH B 70 1070 108 HOH HOH . F 3 HOH B 71 1071 150 HOH HOH . F 3 HOH B 72 1072 48 HOH HOH . F 3 HOH B 73 1073 53 HOH HOH . F 3 HOH B 74 1074 61 HOH HOH . F 3 HOH B 75 1075 154 HOH HOH . F 3 HOH B 76 1076 55 HOH HOH . F 3 HOH B 77 1077 167 HOH HOH . F 3 HOH B 78 1078 76 HOH HOH . F 3 HOH B 79 1079 200 HOH HOH . F 3 HOH B 80 1080 70 HOH HOH . F 3 HOH B 81 1081 94 HOH HOH . F 3 HOH B 82 1082 46 HOH HOH . F 3 HOH B 83 1083 66 HOH HOH . F 3 HOH B 84 1084 184 HOH HOH . F 3 HOH B 85 1085 201 HOH HOH . F 3 HOH B 86 1086 85 HOH HOH . F 3 HOH B 87 1087 20 HOH HOH . F 3 HOH B 88 1088 203 HOH HOH . F 3 HOH B 89 1089 65 HOH HOH . F 3 HOH B 90 1090 17 HOH HOH . F 3 HOH B 91 1091 42 HOH HOH . F 3 HOH B 92 1092 97 HOH HOH . F 3 HOH B 93 1093 91 HOH HOH . F 3 HOH B 94 1094 24 HOH HOH . F 3 HOH B 95 1095 77 HOH HOH . F 3 HOH B 96 1096 7 HOH HOH . F 3 HOH B 97 1097 68 HOH HOH . F 3 HOH B 98 1098 45 HOH HOH . F 3 HOH B 99 1099 31 HOH HOH . F 3 HOH B 100 1100 112 HOH HOH . F 3 HOH B 101 1101 2 HOH HOH . F 3 HOH B 102 1102 76 HOH HOH . F 3 HOH B 103 1103 51 HOH HOH . F 3 HOH B 104 1104 61 HOH HOH . F 3 HOH B 105 1105 114 HOH HOH . F 3 HOH B 106 1106 42 HOH HOH . F 3 HOH B 107 1107 35 HOH HOH . F 3 HOH B 108 1108 186 HOH HOH . F 3 HOH B 109 1109 87 HOH HOH . F 3 HOH B 110 1110 67 HOH HOH . F 3 HOH B 111 1111 69 HOH HOH . F 3 HOH B 112 1112 100 HOH HOH . F 3 HOH B 113 1113 74 HOH HOH . F 3 HOH B 114 1114 80 HOH HOH . F 3 HOH B 115 1115 115 HOH HOH . F 3 HOH B 116 1116 104 HOH HOH . F 3 HOH B 117 1117 157 HOH HOH . F 3 HOH B 118 1118 105 HOH HOH . F 3 HOH B 119 1119 80 HOH HOH . F 3 HOH B 120 1120 109 HOH HOH . F 3 HOH B 121 1121 29 HOH HOH . F 3 HOH B 122 1122 45 HOH HOH . F 3 HOH B 123 1123 83 HOH HOH . F 3 HOH B 124 1124 71 HOH HOH . F 3 HOH B 125 1125 36 HOH HOH . F 3 HOH B 126 1126 16 HOH HOH . F 3 HOH B 127 1127 49 HOH HOH . F 3 HOH B 128 1128 89 HOH HOH . F 3 HOH B 129 1129 46 HOH HOH . F 3 HOH B 130 1130 114 HOH HOH . F 3 HOH B 131 1131 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 46.506 -48.307 9.379 1 99.61 ? C1 EDO 901 A 1 HETATM 2 O O1 EDO . . . C 2 46.825 -47.176 10.23 1 98.88 ? O1 EDO 901 A 1 HETATM 3 C C2 EDO . . . C 2 46.091 -49.628 10.16 1 100 ? C2 EDO 901 A 1 HETATM 4 O O2 EDO . . . C 2 47.243 -50.435 10.508 1 99.95 ? O2 EDO 901 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #