data_7AH5
#
_model_server_result.job_id            fBSUJisM2tPm1VfSDAGnPg 
_model_server_result.datetime_utc      '2024-11-05 16:49:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ah5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    7AH5 
#
_exptl.entry_id    7AH5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7AH5 
_cell.length_a            84.988 
_cell.length_b            93.106 
_cell.length_c            130.36 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AH5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 328 A CYS 308 1_555 B SG CYS 328 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc1 A NE2 HIS 366 A HIS 346 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? 
metalc ? metalc2 C FE HEM . A HEM 501 1_555 D N03 RCQ . A RCQ 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? 
metalc ? metalc3 B NE2 HIS 366 B HIS 346 1_555 F FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc4 F FE HEM . B HEM 501 1_555 G N03 RCQ . B RCQ 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     7AH5 
_atom_sites.fract_transf_matrix[1][1]    0.011766 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01074 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 501 404 HEM HEM . 
D 3 RCQ A 1 502 1 RCQ LIG . 
E 3 RCQ A 1 503 2 RCQ LIG . 
F 2 HEM B 1 501 404 HEM HEM . 
G 3 RCQ B 1 502 3 RCQ LIG . 
H 3 RCQ B 1 503 4 RCQ LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . F 2 -19.811 -4.135 -19.848 0.93 51.69 ? CHA HEM 501 B 1 
HETATM 2 C CHB HEM . . . F 2 -21.64 -8.434 -21.151 0.93 54.47 ? CHB HEM 501 B 1 
HETATM 3 C CHC HEM . . . F 2 -23.122 -9.324 -16.642 0.93 57.48 ? CHC HEM 501 B 1 
HETATM 4 C CHD HEM . . . F 2 -20.998 -5.187 -15.27 0.93 54.57 ? CHD HEM 501 B 1 
HETATM 5 C C1A HEM . . . F 2 -20.294 -5.172 -20.622 0.93 53.82 ? C1A HEM 501 B 1 
HETATM 6 C C2A HEM . . . F 2 -20.426 -5.205 -22.073 0.93 56.29 ? C2A HEM 501 B 1 
HETATM 7 C C3A HEM . . . F 2 -20.933 -6.399 -22.407 0.93 53.96 ? C3A HEM 501 B 1 
HETATM 8 C C4A HEM . . . F 2 -21.137 -7.159 -21.2 0.93 51.11 ? C4A HEM 501 B 1 
HETATM 9 C CMA HEM . . . F 2 -21.262 -6.918 -23.824 0.93 43.34 ? CMA HEM 501 B 1 
HETATM 10 C CAA HEM . . . F 2 -20.044 -4.078 -23.067 0.93 59.04 ? CAA HEM 501 B 1 
HETATM 11 C CBA HEM . . . F 2 -20.725 -2.759 -22.726 0.93 57.36 ? CBA HEM 501 B 1 
HETATM 12 C CGA HEM . . . F 2 -22.126 -2.87 -23.246 0.93 56.73 ? CGA HEM 501 B 1 
HETATM 13 O O1A HEM . . . F 2 -23.064 -2.437 -22.532 0.93 55.29 ? O1A HEM 501 B 1 
HETATM 14 O O2A HEM . . . F 2 -22.294 -3.417 -24.367 0.93 50.31 ? O2A HEM 501 B 1 
HETATM 15 C C1B HEM . . . F 2 -22.202 -9.043 -20.058 0.93 55.59 ? C1B HEM 501 B 1 
HETATM 16 C C2B HEM . . . F 2 -22.882 -10.317 -20.067 0.93 58.9 ? C2B HEM 501 B 1 
HETATM 17 C C3B HEM . . . F 2 -23.285 -10.575 -18.813 0.93 63.3 ? C3B HEM 501 B 1 
HETATM 18 C C4B HEM . . . F 2 -22.887 -9.455 -17.989 0.93 60.72 ? C4B HEM 501 B 1 
HETATM 19 C CMB HEM . . . F 2 -23.04 -11.177 -21.341 0.93 58.8 ? CMB HEM 501 B 1 
HETATM 20 C CAB HEM . . . F 2 -24.073 -11.781 -18.249 0.93 65.79 ? CAB HEM 501 B 1 
HETATM 21 C CBB HEM . . . F 2 -24.789 -12.611 -19.011 0.93 64.09 ? CBB HEM 501 B 1 
HETATM 22 C C1C HEM . . . F 2 -22.737 -8.239 -15.891 0.93 56.89 ? C1C HEM 501 B 1 
HETATM 23 C C2C HEM . . . F 2 -23.156 -7.951 -14.538 0.93 54.74 ? C2C HEM 501 B 1 
HETATM 24 C C3C HEM . . . F 2 -22.554 -6.808 -14.163 0.93 53.46 ? C3C HEM 501 B 1 
HETATM 25 C C4C HEM . . . F 2 -21.758 -6.336 -15.272 0.93 55.44 ? C4C HEM 501 B 1 
HETATM 26 C CMC HEM . . . F 2 -24.11 -8.863 -13.736 0.93 60.63 ? CMC HEM 501 B 1 
HETATM 27 C CAC HEM . . . F 2 -22.64 -6.023 -12.837 0.93 54.68 ? CAC HEM 501 B 1 
HETATM 28 C CBC HEM . . . F 2 -23.571 -6.244 -11.911 0.93 57.38 ? CBC HEM 501 B 1 
HETATM 29 C C1D HEM . . . F 2 -20.499 -4.531 -16.373 0.93 51.59 ? C1D HEM 501 B 1 
HETATM 30 C C2D HEM . . . F 2 -19.823 -3.253 -16.367 0.93 49.19 ? C2D HEM 501 B 1 
HETATM 31 C C3D HEM . . . F 2 -19.485 -2.95 -17.626 0.93 48.87 ? C3D HEM 501 B 1 
HETATM 32 C C4D HEM . . . F 2 -19.945 -4.033 -18.479 0.93 51.97 ? C4D HEM 501 B 1 
HETATM 33 C CMD HEM . . . F 2 -19.553 -2.412 -15.103 0.93 49.6 ? CMD HEM 501 B 1 
HETATM 34 C CAD HEM . . . F 2 -18.74 -1.676 -18.088 0.93 45.99 ? CAD HEM 501 B 1 
HETATM 35 C CBD HEM . . . F 2 -17.319 -2.048 -18.516 0.93 48.57 ? CBD HEM 501 B 1 
HETATM 36 C CGD HEM . . . F 2 -16.391 -2.094 -17.326 0.93 51.97 ? CGD HEM 501 B 1 
HETATM 37 O O1D HEM . . . F 2 -15.319 -2.75 -17.41 0.93 50.61 ? O1D HEM 501 B 1 
HETATM 38 O O2D HEM . . . F 2 -16.723 -1.475 -16.283 0.93 57.26 ? O2D HEM 501 B 1 
HETATM 39 N NA HEM . . . F 2 -20.74 -6.386 -20.128 0.93 52.63 ? NA HEM 501 B 1 
HETATM 40 N NB HEM . . . F 2 -22.224 -8.539 -18.777 0.93 58.87 ? NB HEM 501 B 1 
HETATM 41 N NC HEM . . . F 2 -21.889 -7.233 -16.308 0.93 54.56 ? NC HEM 501 B 1 
HETATM 42 N ND HEM . . . F 2 -20.557 -4.977 -17.675 0.93 53.28 ? ND HEM 501 B 1 
HETATM 43 FE FE HEM . . . F 2 -21.466 -6.725 -18.21 0.93 56.69 ? FE HEM 501 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           43 
#