data_7AHF # _model_server_result.job_id It36jyXRXU0mNU7sXIzXxQ _model_server_result.datetime_utc '2024-10-10 01:24:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ahf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 7AHF # _exptl.entry_id 7AHF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.07 _cell.angle_gamma 90 _cell.entry_id 7AHF _cell.length_a 45.317 _cell.length_b 48.411 _cell.length_c 70.127 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AHF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N ? 2 G N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 118 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 118 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 118 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 118 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.838 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7AHF _atom_sites.fract_transf_matrix[1][1] 0.022067 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006774 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020656 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014917 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO B 1 201 201 EDO EDO . D 3 GOL B 1 202 201 GOL GOL . E 2 EDO A 1 401 401 EDO EDO . F 2 EDO A 1 402 501 EDO EDO . G 2 EDO A 1 403 601 EDO EDO . H 4 HOH B 1 301 92 HOH HOH . H 4 HOH B 2 302 22 HOH HOH . H 4 HOH B 3 303 94 HOH HOH . H 4 HOH B 4 304 72 HOH HOH . H 4 HOH B 5 305 58 HOH HOH . H 4 HOH B 6 306 100 HOH HOH . H 4 HOH B 7 307 66 HOH HOH . H 4 HOH B 8 308 20 HOH HOH . H 4 HOH B 9 309 3 HOH HOH . H 4 HOH B 10 310 10 HOH HOH . H 4 HOH B 11 311 43 HOH HOH . H 4 HOH B 12 312 8 HOH HOH . H 4 HOH B 13 313 69 HOH HOH . H 4 HOH B 14 314 6 HOH HOH . H 4 HOH B 15 315 83 HOH HOH . H 4 HOH B 16 316 80 HOH HOH . H 4 HOH B 17 317 16 HOH HOH . H 4 HOH B 18 318 36 HOH HOH . H 4 HOH B 19 319 60 HOH HOH . H 4 HOH B 20 320 15 HOH HOH . H 4 HOH B 21 321 85 HOH HOH . H 4 HOH B 22 322 18 HOH HOH . H 4 HOH B 23 323 2 HOH HOH . H 4 HOH B 24 324 65 HOH HOH . H 4 HOH B 25 325 32 HOH HOH . H 4 HOH B 26 326 59 HOH HOH . H 4 HOH B 27 327 77 HOH HOH . H 4 HOH B 28 328 38 HOH HOH . H 4 HOH B 29 329 95 HOH HOH . H 4 HOH B 30 330 84 HOH HOH . H 4 HOH B 31 331 70 HOH HOH . H 4 HOH B 32 332 14 HOH HOH . H 4 HOH B 33 333 39 HOH HOH . H 4 HOH B 34 334 33 HOH HOH . H 4 HOH B 35 335 91 HOH HOH . H 4 HOH B 36 336 31 HOH HOH . H 4 HOH B 37 337 67 HOH HOH . H 4 HOH B 38 338 57 HOH HOH . I 4 HOH A 1 501 11 HOH HOH . I 4 HOH A 2 502 97 HOH HOH . I 4 HOH A 3 503 21 HOH HOH . I 4 HOH A 4 504 28 HOH HOH . I 4 HOH A 5 505 48 HOH HOH . I 4 HOH A 6 506 23 HOH HOH . I 4 HOH A 7 507 1 HOH HOH . I 4 HOH A 8 508 19 HOH HOH . I 4 HOH A 9 509 17 HOH HOH . I 4 HOH A 10 510 88 HOH HOH . I 4 HOH A 11 511 50 HOH HOH . I 4 HOH A 12 512 37 HOH HOH . I 4 HOH A 13 513 5 HOH HOH . I 4 HOH A 14 514 46 HOH HOH . I 4 HOH A 15 515 61 HOH HOH . I 4 HOH A 16 516 54 HOH HOH . I 4 HOH A 17 517 81 HOH HOH . I 4 HOH A 18 518 45 HOH HOH . I 4 HOH A 19 519 34 HOH HOH . I 4 HOH A 20 520 24 HOH HOH . I 4 HOH A 21 521 56 HOH HOH . I 4 HOH A 22 522 7 HOH HOH . I 4 HOH A 23 523 78 HOH HOH . I 4 HOH A 24 524 27 HOH HOH . I 4 HOH A 25 525 30 HOH HOH . I 4 HOH A 26 526 79 HOH HOH . I 4 HOH A 27 527 71 HOH HOH . I 4 HOH A 28 528 90 HOH HOH . I 4 HOH A 29 529 9 HOH HOH . I 4 HOH A 30 530 89 HOH HOH . I 4 HOH A 31 531 55 HOH HOH . I 4 HOH A 32 532 51 HOH HOH . I 4 HOH A 33 533 98 HOH HOH . I 4 HOH A 34 534 29 HOH HOH . I 4 HOH A 35 535 101 HOH HOH . I 4 HOH A 36 536 73 HOH HOH . I 4 HOH A 37 537 44 HOH HOH . I 4 HOH A 38 538 26 HOH HOH . I 4 HOH A 39 539 99 HOH HOH . I 4 HOH A 40 540 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 2 -23.71 -2.008 -24.455 1 45.73 ? C1 EDO 402 A 1 HETATM 2 O O1 EDO . . . F 2 -22.293 -2.014 -24.244 1 46.63 ? O1 EDO 402 A 1 HETATM 3 C C2 EDO . . . F 2 -23.982 -1.895 -25.949 1 50.58 ? C2 EDO 402 A 1 HETATM 4 O O2 EDO . . . F 2 -23.26 -0.773 -26.468 1 48.29 ? O2 EDO 402 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #