data_7AJD # _model_server_result.job_id aBRVI7YUqcoUEuP3AxCEOQ _model_server_result.datetime_utc '2024-11-21 14:40:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ajd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JB","auth_seq_id":102}' # _entry.id 7AJD # _exptl.entry_id 7AJD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 722.97 _entity.id 20 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AJD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AJD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 58-meric _pdbx_struct_assembly.oligomeric_count 58 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 20 JB N N ? 20 KB N N ? 20 OB N N ? 20 PB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 L C LEU 42 K LEU 42 1_555 L N M3L 43 K M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 L C M3L 43 K M3L 43 1_555 L N GLN 44 K GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 M C LEU 42 L LEU 42 1_555 M N M3L 43 L M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 M C M3L 43 L M3L 43 1_555 M N GLN 44 L GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 N C LEU 42 M LEU 42 1_555 N N M3L 43 M M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 N C M3L 43 M M3L 43 1_555 N N GLN 44 M GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 O C LEU 42 N LEU 42 1_555 O N M3L 43 N M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 O C M3L 43 N M3L 43 1_555 O N GLN 44 N GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale9 P C LEU 42 O LEU 42 1_555 P N M3L 43 O M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale10 P C M3L 43 O M3L 43 1_555 P N GLN 44 O GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale11 Q C LEU 42 P LEU 42 1_555 Q N M3L 43 P M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 Q C M3L 43 P M3L 43 1_555 Q N GLN 44 P GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale13 R C LEU 42 Q LEU 42 1_555 R N M3L 43 Q M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale14 R C M3L 43 Q M3L 43 1_555 R N GLN 44 Q GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 S C LEU 42 R LEU 42 1_555 S N M3L 43 R M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale16 S C M3L 43 R M3L 43 1_555 S N GLN 44 R GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale17 OA C LEU 42 AK LEU 42 1_555 OA N M3L 43 AK M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale18 OA C M3L 43 AK M3L 43 1_555 OA N GLN 44 AK GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale19 PA C LEU 42 AL LEU 42 1_555 PA N M3L 43 AL M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale20 PA C M3L 43 AL M3L 43 1_555 PA N GLN 44 AL GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale21 QA C LEU 42 AM LEU 42 1_555 QA N M3L 43 AM M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale22 QA C M3L 43 AM M3L 43 1_555 QA N GLN 44 AM GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale23 RA C LEU 42 AN LEU 42 1_555 RA N M3L 43 AN M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale24 RA C M3L 43 AN M3L 43 1_555 RA N GLN 44 AN GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale25 SA C LEU 42 AO LEU 42 1_555 SA N M3L 43 AO M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale26 SA C M3L 43 AO M3L 43 1_555 SA N GLN 44 AO GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 TA C LEU 42 AP LEU 42 1_555 TA N M3L 43 AP M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale28 TA C M3L 43 AP M3L 43 1_555 TA N GLN 44 AP GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale29 UA C LEU 42 AQ LEU 42 1_555 UA N M3L 43 AQ M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale30 UA C M3L 43 AQ M3L 43 1_555 UA N GLN 44 AQ GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale31 VA C LEU 42 AR LEU 42 1_555 VA N M3L 43 AR M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale32 VA C M3L 43 AR M3L 43 1_555 VA N GLN 44 AR GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C38 H75 O10 P' _chem_comp.formula_weight 722.97 _chem_comp.id LHG _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7AJD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code GB 19 CDL a 1 301 1 CDL CDL . HB 19 CDL b 1 301 2 CDL CDL . IB 19 CDL f 1 101 3 CDL CDL . JB 20 LHG f 1 102 5 LHG LHG . KB 20 LHG f 1 103 4 LHG LHG . LB 19 CDL Aa 1 301 1 CDL CDL . MB 19 CDL Ab 1 301 2 CDL CDL . NB 19 CDL Af 1 101 3 CDL CDL . OB 20 LHG Af 1 102 5 LHG LHG . PB 20 LHG Af 1 103 4 LHG LHG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 LHG . . . JB 20 263.544 228.131 217.155 1 40.16 ? O1 LHG 102 f 1 HETATM 2 C C1 LHG . . . JB 20 263.874 227.073 218.037 1 40.16 ? C1 LHG 102 f 1 HETATM 3 C C2 LHG . . . JB 20 264.589 226.003 217.27 1 40.16 ? C2 LHG 102 f 1 HETATM 4 O O2 LHG . . . JB 20 263.894 225.713 216.07 1 40.16 ? O2 LHG 102 f 1 HETATM 5 C C3 LHG . . . JB 20 264.711 224.696 217.984 1 40.16 ? C3 LHG 102 f 1 HETATM 6 O O3 LHG . . . JB 20 264.879 223.832 216.868 1 40.16 ? O3 LHG 102 f 1 HETATM 7 P P LHG . . . JB 20 266.373 223.514 216.446 1 40.16 ? P LHG 102 f 1 HETATM 8 O O4 LHG . . . JB 20 267.103 224.711 215.962 1 40.16 ? O4 LHG 102 f 1 HETATM 9 O O5 LHG . . . JB 20 266.992 222.642 217.48 1 40.16 ? O5 LHG 102 f 1 HETATM 10 O O6 LHG . . . JB 20 266.27 222.737 215.068 1 40.16 ? O6 LHG 102 f 1 HETATM 11 C C4 LHG . . . JB 20 265.652 223.376 213.95 1 40.16 ? C4 LHG 102 f 1 HETATM 12 C C5 LHG . . . JB 20 266.658 223.371 212.828 1 40.16 ? C5 LHG 102 f 1 HETATM 13 C C6 LHG . . . JB 20 266.173 224.065 211.581 1 40.16 ? C6 LHG 102 f 1 HETATM 14 O O7 LHG . . . JB 20 267.857 224.019 213.31 1 40.16 ? O7 LHG 102 f 1 HETATM 15 C C7 LHG . . . JB 20 269.013 223.72 212.727 1 40.16 ? C7 LHG 102 f 1 HETATM 16 O O9 LHG . . . JB 20 269.143 223.02 211.773 1 40.16 ? O9 LHG 102 f 1 HETATM 17 C C8 LHG . . . JB 20 270.115 224.453 213.351 1 40.16 ? C8 LHG 102 f 1 HETATM 18 C C9 LHG . . . JB 20 270.568 225.567 212.5 1 40.16 ? C9 LHG 102 f 1 HETATM 19 C C10 LHG . . . JB 20 271.449 225.132 211.336 1 40.16 ? C10 LHG 102 f 1 HETATM 20 O O8 LHG . . . JB 20 266.195 223.097 210.512 1 40.16 ? O8 LHG 102 f 1 HETATM 21 C C23 LHG . . . JB 20 265.642 223.459 209.363 1 40.16 ? C23 LHG 102 f 1 HETATM 22 O O10 LHG . . . JB 20 264.823 224.318 209.261 1 40.16 ? O10 LHG 102 f 1 HETATM 23 C C24 LHG . . . JB 20 266.189 222.689 208.219 1 40.16 ? C24 LHG 102 f 1 HETATM 24 C C11 LHG . . . JB 20 271.072 225.767 210.042 1 40.16 ? C11 LHG 102 f 1 HETATM 25 C C12 LHG . . . JB 20 271.829 225.273 208.855 1 40.16 ? C12 LHG 102 f 1 HETATM 26 C C13 LHG . . . JB 20 271.278 225.795 207.557 1 40.16 ? C13 LHG 102 f 1 HETATM 27 C C14 LHG . . . JB 20 272.216 225.779 206.394 1 40.16 ? C14 LHG 102 f 1 HETATM 28 C C15 LHG . . . JB 20 272.666 224.412 205.951 1 40.16 ? C15 LHG 102 f 1 HETATM 29 C C16 LHG . . . JB 20 272.227 223.959 204.577 1 40.16 ? C16 LHG 102 f 1 HETATM 30 C C17 LHG . . . JB 20 272.977 224.603 203.426 1 40.16 ? C17 LHG 102 f 1 HETATM 31 C C18 LHG . . . JB 20 272.804 223.96 202.076 1 40.16 ? C18 LHG 102 f 1 HETATM 32 C C19 LHG . . . JB 20 271.381 223.682 201.64 1 40.16 ? C19 LHG 102 f 1 HETATM 33 C C20 LHG . . . JB 20 270.455 224.868 201.64 1 40.16 ? C20 LHG 102 f 1 HETATM 34 C C25 LHG . . . JB 20 265.149 222.238 207.235 1 40.16 ? C25 LHG 102 f 1 HETATM 35 C C26 LHG . . . JB 20 265.561 222.415 205.782 1 40.16 ? C26 LHG 102 f 1 HETATM 36 C C27 LHG . . . JB 20 266.817 221.679 205.382 1 40.16 ? C27 LHG 102 f 1 HETATM 37 C C28 LHG . . . JB 20 266.991 221.481 203.904 1 40.16 ? C28 LHG 102 f 1 HETATM 38 C C29 LHG . . . JB 20 266.392 220.219 203.358 1 40.16 ? C29 LHG 102 f 1 HETATM 39 C C30 LHG . . . JB 20 267.344 219.059 203.263 1 40.16 ? C30 LHG 102 f 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 75 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 39 #