data_7AJI # _model_server_result.job_id 62NnX_nxURAaiorGD7YHQA _model_server_result.datetime_utc '2024-11-21 14:41:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aji # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"PB","auth_seq_id":104}' # _entry.id 7AJI # _exptl.entry_id 7AJI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 722.97 _entity.id 20 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AJI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AJI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 58-meric _pdbx_struct_assembly.oligomeric_count 58 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 20 JB N N ? 20 KB N N ? 20 OB N N ? 20 PB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 L C LEU 42 K LEU 42 1_555 L N M3L 43 K M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 L C M3L 43 K M3L 43 1_555 L N GLN 44 K GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 M C LEU 42 L LEU 42 1_555 M N M3L 43 L M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 M C M3L 43 L M3L 43 1_555 M N GLN 44 L GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 N C LEU 42 M LEU 42 1_555 N N M3L 43 M M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 N C M3L 43 M M3L 43 1_555 N N GLN 44 M GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale7 O C LEU 42 N LEU 42 1_555 O N M3L 43 N M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 O C M3L 43 N M3L 43 1_555 O N GLN 44 N GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale9 P C LEU 42 O LEU 42 1_555 P N M3L 43 O M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale10 P C M3L 43 O M3L 43 1_555 P N GLN 44 O GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 Q C LEU 42 P LEU 42 1_555 Q N M3L 43 P M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 Q C M3L 43 P M3L 43 1_555 Q N GLN 44 P GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale13 R C LEU 42 Q LEU 42 1_555 R N M3L 43 Q M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale14 R C M3L 43 Q M3L 43 1_555 R N GLN 44 Q GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale15 S C LEU 42 R LEU 42 1_555 S N M3L 43 R M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale16 S C M3L 43 R M3L 43 1_555 S N GLN 44 R GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale17 OA C LEU 42 AK LEU 42 1_555 OA N M3L 43 AK M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale18 OA C M3L 43 AK M3L 43 1_555 OA N GLN 44 AK GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale19 PA C LEU 42 AL LEU 42 1_555 PA N M3L 43 AL M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale20 PA C M3L 43 AL M3L 43 1_555 PA N GLN 44 AL GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale21 QA C LEU 42 AM LEU 42 1_555 QA N M3L 43 AM M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale22 QA C M3L 43 AM M3L 43 1_555 QA N GLN 44 AM GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale23 RA C LEU 42 AN LEU 42 1_555 RA N M3L 43 AN M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale24 RA C M3L 43 AN M3L 43 1_555 RA N GLN 44 AN GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale25 SA C LEU 42 AO LEU 42 1_555 SA N M3L 43 AO M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale26 SA C M3L 43 AO M3L 43 1_555 SA N GLN 44 AO GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale27 TA C LEU 42 AP LEU 42 1_555 TA N M3L 43 AP M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale28 TA C M3L 43 AP M3L 43 1_555 TA N GLN 44 AP GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale29 UA C LEU 42 AQ LEU 42 1_555 UA N M3L 43 AQ M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale30 UA C M3L 43 AQ M3L 43 1_555 UA N GLN 44 AQ GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale31 VA C LEU 42 AR LEU 42 1_555 VA N M3L 43 AR M3L 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale32 VA C M3L 43 AR M3L 43 1_555 VA N GLN 44 AR GLN 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? # _chem_comp.formula 'C38 H75 O10 P' _chem_comp.formula_weight 722.97 _chem_comp.id LHG _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7AJI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code GB 19 CDL a 1 301 1 CDL CDL . HB 19 CDL b 1 301 2 CDL CDL . IB 19 CDL f 1 101 3 CDL CDL . JB 20 LHG f 1 102 5 LHG LHG . KB 20 LHG f 1 103 4 LHG LHG . LB 19 CDL Aa 1 301 1 CDL CDL . MB 19 CDL Af 1 101 2 CDL CDL . NB 19 CDL Af 1 102 3 CDL CDL . OB 20 LHG Af 1 103 4 LHG LHG . PB 20 LHG Af 1 104 5 LHG LHG . QB 21 HOH A 1 601 703 HOH HOH . QB 21 HOH A 2 602 701 HOH HOH . QB 21 HOH A 3 603 702 HOH HOH . RB 21 HOH B 1 601 704 HOH HOH . RB 21 HOH B 2 602 703 HOH HOH . RB 21 HOH B 3 603 701 HOH HOH . RB 21 HOH B 4 604 702 HOH HOH . SB 21 HOH C 1 701 701 HOH HOH . SB 21 HOH C 2 702 703 HOH HOH . SB 21 HOH C 3 703 704 HOH HOH . SB 21 HOH C 4 704 702 HOH HOH . TB 21 HOH D 1 501 703 HOH HOH . TB 21 HOH D 2 502 702 HOH HOH . TB 21 HOH D 3 503 701 HOH HOH . UB 21 HOH F 1 501 702 HOH HOH . UB 21 HOH F 2 502 703 HOH HOH . UB 21 HOH F 3 503 701 HOH HOH . VB 21 HOH AA 1 601 703 HOH HOH . VB 21 HOH AA 2 602 702 HOH HOH . VB 21 HOH AA 3 603 701 HOH HOH . WB 21 HOH AB 1 601 704 HOH HOH . WB 21 HOH AB 2 602 703 HOH HOH . WB 21 HOH AB 3 603 701 HOH HOH . WB 21 HOH AB 4 604 702 HOH HOH . XB 21 HOH AC 1 601 703 HOH HOH . XB 21 HOH AC 2 602 701 HOH HOH . XB 21 HOH AC 3 603 704 HOH HOH . YB 21 HOH AD 1 501 702 HOH HOH . YB 21 HOH AD 2 502 703 HOH HOH . YB 21 HOH AD 3 503 701 HOH HOH . ZB 21 HOH AF 1 501 702 HOH HOH . ZB 21 HOH AF 2 502 701 HOH HOH . ZB 21 HOH AF 3 503 703 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 LHG . . . PB 20 261.584 297.134 218.214 1 50.75 ? O1 LHG 104 Af 1 HETATM 2 C C1 LHG . . . PB 20 261.955 298.493 218.447 1 50.75 ? C1 LHG 104 Af 1 HETATM 3 C C2 LHG . . . PB 20 260.697 299.32 218.485 1 50.75 ? C2 LHG 104 Af 1 HETATM 4 O O2 LHG . . . PB 20 259.903 299.032 217.352 1 50.75 ? O2 LHG 104 Af 1 HETATM 5 C C3 LHG . . . PB 20 260.916 300.826 218.488 1 50.75 ? C3 LHG 104 Af 1 HETATM 6 O O3 LHG . . . PB 20 260.843 301.1 217.1 1 50.75 ? O3 LHG 104 Af 1 HETATM 7 P P LHG . . . PB 20 260.264 302.501 216.51 1 50.75 ? P LHG 104 Af 1 HETATM 8 O O4 LHG . . . PB 20 258.807 302.536 216.811 1 50.75 ? O4 LHG 104 Af 1 HETATM 9 O O5 LHG . . . PB 20 261.355 303.492 216.689 1 50.75 ? O5 LHG 104 Af 1 HETATM 10 O O6 LHG . . . PB 20 260.291 302.007 214.923 1 50.75 ? O6 LHG 104 Af 1 HETATM 11 C C4 LHG . . . PB 20 259.098 301.841 214.219 1 50.75 ? C4 LHG 104 Af 1 HETATM 12 C C5 LHG . . . PB 20 259.539 301.861 212.763 1 50.75 ? C5 LHG 104 Af 1 HETATM 13 C C6 LHG . . . PB 20 260.387 300.652 212.409 1 50.75 ? C6 LHG 104 Af 1 HETATM 14 O O7 LHG . . . PB 20 258.367 301.801 212.006 1 50.75 ? O7 LHG 104 Af 1 HETATM 15 C C7 LHG . . . PB 20 258.282 302.795 211.101 1 50.75 ? C7 LHG 104 Af 1 HETATM 16 O O9 LHG . . . PB 20 259.251 303.21 210.491 1 50.75 ? O9 LHG 104 Af 1 HETATM 17 C C8 LHG . . . PB 20 256.986 303.485 211.219 1 50.75 ? C8 LHG 104 Af 1 HETATM 18 C C9 LHG . . . PB 20 255.872 302.481 211.122 1 50.75 ? C9 LHG 104 Af 1 HETATM 19 C C10 LHG . . . PB 20 255.727 302.004 209.685 1 50.75 ? C10 LHG 104 Af 1 HETATM 20 O O8 LHG . . . PB 20 261.638 301.22 211.989 1 50.75 ? O8 LHG 104 Af 1 HETATM 21 C C23 LHG . . . PB 20 262.075 300.92 210.73 1 50.75 ? C23 LHG 104 Af 1 HETATM 22 O O10 LHG . . . PB 20 262.851 299.996 210.574 1 50.75 ? O10 LHG 104 Af 1 HETATM 23 C C24 LHG . . . PB 20 261.846 301.9 209.584 1 50.75 ? C24 LHG 104 Af 1 HETATM 24 C C11 LHG . . . PB 20 256.437 300.66 209.643 1 50.75 ? C11 LHG 104 Af 1 HETATM 25 C C12 LHG . . . PB 20 255.797 299.799 208.6 1 50.75 ? C12 LHG 104 Af 1 HETATM 26 C C13 LHG . . . PB 20 256.212 300.293 207.231 1 50.75 ? C13 LHG 104 Af 1 HETATM 27 C C14 LHG . . . PB 20 255.054 300.266 206.259 1 50.75 ? C14 LHG 104 Af 1 HETATM 28 C C15 LHG . . . PB 20 254.443 301.654 206.261 1 50.75 ? C15 LHG 104 Af 1 HETATM 29 C C16 LHG . . . PB 20 255.024 302.433 205.113 1 50.75 ? C16 LHG 104 Af 1 HETATM 30 C C17 LHG . . . PB 20 254.329 302.042 203.812 1 50.75 ? C17 LHG 104 Af 1 HETATM 31 C C18 LHG . . . PB 20 255.067 302.818 202.745 1 50.75 ? C18 LHG 104 Af 1 HETATM 32 C C19 LHG . . . PB 20 254.994 302.193 201.372 1 50.75 ? C19 LHG 104 Af 1 HETATM 33 C C20 LHG . . . PB 20 253.509 302.209 201.092 1 50.75 ? C20 LHG 104 Af 1 HETATM 34 C C25 LHG . . . PB 20 262.703 301.678 208.354 1 50.75 ? C25 LHG 104 Af 1 HETATM 35 C C26 LHG . . . PB 20 262.159 302.226 207.031 1 50.75 ? C26 LHG 104 Af 1 HETATM 36 C C27 LHG . . . PB 20 263.398 302.355 206.169 1 50.75 ? C27 LHG 104 Af 1 HETATM 37 C C28 LHG . . . PB 20 263.179 302.3 204.677 1 50.75 ? C28 LHG 104 Af 1 HETATM 38 C C29 LHG . . . PB 20 262.212 303.426 204.341 1 50.75 ? C29 LHG 104 Af 1 HETATM 39 C C30 LHG . . . PB 20 262.3 303.98 202.938 1 50.75 ? C30 LHG 104 Af 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 60 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 39 #