data_7AJZ # _model_server_result.job_id UoNqNw8jWhhgZbObyOH5Qg _model_server_result.datetime_utc '2024-11-24 03:44:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ajz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 7AJZ # _exptl.entry_id 7AJZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AJZ _cell.length_a 57.51 _cell.length_b 92.558 _cell.length_c 276.064 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AJZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F,G 1 1 B,E,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ALA 1 C ALA 2 1_555 C N DGL 2 C DGL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 sing covale ? covale2 C N ALA 1 C ALA 2 1_555 F C10 AMV . C AMV 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale3 C CD DGL 2 C DGL 3 1_555 C N API 3 C API 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 C C API 3 C API 4 1_555 C N DAL 4 C DAL 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 181 n n C1 C2 EDO sing 182 n n C1 H11 EDO sing 183 n n C1 H12 EDO sing 184 n n O1 HO1 EDO sing 185 n n C2 O2 EDO sing 186 n n C2 H21 EDO sing 187 n n C2 H22 EDO sing 188 n n O2 HO2 EDO sing 189 n n # _atom_sites.entry_id 7AJZ _atom_sites.fract_transf_matrix[1][1] 0.017388 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003622 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 EDO A 1 601 601 EDO EDO . E 3 EDO B 1 601 601 EDO EDO . F 4 AMV C 1 101 601 AMV M4P . G 5 HOH A 1 701 42 HOH HOH . G 5 HOH A 2 702 20 HOH HOH . G 5 HOH A 3 703 1 HOH HOH . G 5 HOH A 4 704 28 HOH HOH . G 5 HOH A 5 705 9 HOH HOH . G 5 HOH A 6 706 22 HOH HOH . G 5 HOH A 7 707 54 HOH HOH . G 5 HOH A 8 708 44 HOH HOH . G 5 HOH A 9 709 21 HOH HOH . G 5 HOH A 10 710 30 HOH HOH . G 5 HOH A 11 711 2 HOH HOH . G 5 HOH A 12 712 41 HOH HOH . G 5 HOH A 13 713 27 HOH HOH . H 5 HOH B 1 701 10 HOH HOH . H 5 HOH B 2 702 17 HOH HOH . H 5 HOH B 3 703 15 HOH HOH . H 5 HOH B 4 704 12 HOH HOH . H 5 HOH B 5 705 5 HOH HOH . H 5 HOH B 6 706 57 HOH HOH . H 5 HOH B 7 707 53 HOH HOH . H 5 HOH B 8 708 36 HOH HOH . H 5 HOH B 9 709 51 HOH HOH . H 5 HOH B 10 710 6 HOH HOH . H 5 HOH B 11 711 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 68.56 115.488 295.708 1 60 ? C1 EDO 601 A 1 HETATM 2 O O1 EDO . . . D 3 69.777 115.567 294.816 1 58.51 ? O1 EDO 601 A 1 HETATM 3 C C2 EDO . . . D 3 68.045 116.96 296.133 1 60 ? C2 EDO 601 A 1 HETATM 4 O O2 EDO . . . D 3 66.882 116.967 297.147 1 60 ? O2 EDO 601 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #