data_7AKQ # _model_server_result.job_id vFTq9GfDgg8bVgVZyunMWA _model_server_result.datetime_utc '2024-11-30 22:59:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7akq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":503}' # _entry.id 7AKQ # _exptl.entry_id 7AKQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AKQ _cell.length_a 68.111 _cell.length_b 68.111 _cell.length_c 176.639 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AKQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 3 3 2 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 3 4 3 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG B 1 NAG 2 n B NAG 2 B 2 NAG B 2 NAG 3 n C NAG 1 C 1 NAG B 3 NAG 3 n C NAG 2 C 2 NAG B 4 NAG 3 n C NAG 3 C 3 NAG B 5 NAG 3 n C NAG 4 C 4 NAG B 6 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.407 ? covale ? covale3 C O4 NAG . C NAG 2 1_555 C C1 NAG . C NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale4 C O4 NAG . C NAG 3 1_555 C C1 NAG . C NAG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? metalc ? metalc1 A OD1 ASP 51 A ASP 51 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc2 A OD2 ASP 51 A ASP 51 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc3 A NE2 HIS 92 A HIS 92 1_555 I ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc4 A NE2 HIS 205 A HIS 205 1_555 F ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc5 A ND1 HIS 205 A HIS 205 1_555 G ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc6 A OD2 ASP 226 A ASP 226 1_555 E ZN ZN . A ZN 502 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc7 A OD1 ASP 232 A ASP 232 1_555 F ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc8 A NE2 HIS 395 A HIS 395 1_555 H ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc9 E ZN ZN . A ZN 502 1_555 J O HOH . A HOH 618 4_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc10 E ZN ZN . A ZN 502 1_555 J O HOH . A HOH 771 4_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc11 G ZN ZN . A ZN 504 1_555 J O HOH . A HOH 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc12 H ZN ZN . A ZN 505 1_555 J O HOH . A HOH 737 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc13 I ZN ZN . A ZN 506 1_555 J O HOH . A HOH 768 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7AKQ _atom_sites.fract_transf_matrix[1][1] 0.014682 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014682 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005661 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ACT A 1 501 501 ACT ACT . E 5 ZN A 1 502 1 ZN ZN . F 5 ZN A 1 503 2 ZN ZN . G 5 ZN A 1 504 3 ZN ZN . H 5 ZN A 1 505 4 ZN ZN . I 5 ZN A 1 506 5 ZN ZN . J 6 HOH A 1 601 146 HOH HOH . J 6 HOH A 2 602 159 HOH HOH . J 6 HOH A 3 603 185 HOH HOH . J 6 HOH A 4 604 40 HOH HOH . J 6 HOH A 5 605 108 HOH HOH . J 6 HOH A 6 606 128 HOH HOH . J 6 HOH A 7 607 161 HOH HOH . J 6 HOH A 8 608 46 HOH HOH . J 6 HOH A 9 609 167 HOH HOH . J 6 HOH A 10 610 14 HOH HOH . J 6 HOH A 11 611 110 HOH HOH . J 6 HOH A 12 612 179 HOH HOH . J 6 HOH A 13 613 119 HOH HOH . J 6 HOH A 14 614 145 HOH HOH . J 6 HOH A 15 615 10 HOH HOH . J 6 HOH A 16 616 56 HOH HOH . J 6 HOH A 17 617 109 HOH HOH . J 6 HOH A 18 618 120 HOH HOH . J 6 HOH A 19 619 66 HOH HOH . J 6 HOH A 20 620 42 HOH HOH . J 6 HOH A 21 621 186 HOH HOH . J 6 HOH A 22 622 178 HOH HOH . J 6 HOH A 23 623 203 HOH HOH . J 6 HOH A 24 624 29 HOH HOH . J 6 HOH A 25 625 137 HOH HOH . J 6 HOH A 26 626 184 HOH HOH . J 6 HOH A 27 627 90 HOH HOH . J 6 HOH A 28 628 64 HOH HOH . J 6 HOH A 29 629 5 HOH HOH . J 6 HOH A 30 630 107 HOH HOH . J 6 HOH A 31 631 206 HOH HOH . J 6 HOH A 32 632 162 HOH HOH . J 6 HOH A 33 633 160 HOH HOH . J 6 HOH A 34 634 53 HOH HOH . J 6 HOH A 35 635 70 HOH HOH . J 6 HOH A 36 636 27 HOH HOH . J 6 HOH A 37 637 166 HOH HOH . J 6 HOH A 38 638 32 HOH HOH . J 6 HOH A 39 639 51 HOH HOH . J 6 HOH A 40 640 76 HOH HOH . J 6 HOH A 41 641 50 HOH HOH . J 6 HOH A 42 642 151 HOH HOH . J 6 HOH A 43 643 60 HOH HOH . J 6 HOH A 44 644 180 HOH HOH . J 6 HOH A 45 645 31 HOH HOH . J 6 HOH A 46 646 124 HOH HOH . J 6 HOH A 47 647 82 HOH HOH . J 6 HOH A 48 648 2 HOH HOH . J 6 HOH A 49 649 71 HOH HOH . J 6 HOH A 50 650 196 HOH HOH . J 6 HOH A 51 651 62 HOH HOH . J 6 HOH A 52 652 8 HOH HOH . J 6 HOH A 53 653 111 HOH HOH . J 6 HOH A 54 654 163 HOH HOH . J 6 HOH A 55 655 4 HOH HOH . J 6 HOH A 56 656 148 HOH HOH . J 6 HOH A 57 657 72 HOH HOH . J 6 HOH A 58 658 154 HOH HOH . J 6 HOH A 59 659 33 HOH HOH . J 6 HOH A 60 660 126 HOH HOH . J 6 HOH A 61 661 28 HOH HOH . J 6 HOH A 62 662 129 HOH HOH . J 6 HOH A 63 663 149 HOH HOH . J 6 HOH A 64 664 172 HOH HOH . J 6 HOH A 65 665 99 HOH HOH . J 6 HOH A 66 666 3 HOH HOH . J 6 HOH A 67 667 155 HOH HOH . J 6 HOH A 68 668 30 HOH HOH . J 6 HOH A 69 669 83 HOH HOH . J 6 HOH A 70 670 130 HOH HOH . J 6 HOH A 71 671 118 HOH HOH . J 6 HOH A 72 672 61 HOH HOH . J 6 HOH A 73 673 49 HOH HOH . J 6 HOH A 74 674 87 HOH HOH . J 6 HOH A 75 675 45 HOH HOH . J 6 HOH A 76 676 35 HOH HOH . J 6 HOH A 77 677 165 HOH HOH . J 6 HOH A 78 678 19 HOH HOH . J 6 HOH A 79 679 57 HOH HOH . J 6 HOH A 80 680 95 HOH HOH . J 6 HOH A 81 681 15 HOH HOH . J 6 HOH A 82 682 74 HOH HOH . J 6 HOH A 83 683 156 HOH HOH . J 6 HOH A 84 684 63 HOH HOH . J 6 HOH A 85 685 106 HOH HOH . J 6 HOH A 86 686 34 HOH HOH . J 6 HOH A 87 687 176 HOH HOH . J 6 HOH A 88 688 12 HOH HOH . J 6 HOH A 89 689 58 HOH HOH . J 6 HOH A 90 690 38 HOH HOH . J 6 HOH A 91 691 25 HOH HOH . J 6 HOH A 92 692 78 HOH HOH . J 6 HOH A 93 693 86 HOH HOH . J 6 HOH A 94 694 20 HOH HOH . J 6 HOH A 95 695 21 HOH HOH . J 6 HOH A 96 696 55 HOH HOH . J 6 HOH A 97 697 140 HOH HOH . J 6 HOH A 98 698 113 HOH HOH . J 6 HOH A 99 699 75 HOH HOH . J 6 HOH A 100 700 68 HOH HOH . J 6 HOH A 101 701 182 HOH HOH . J 6 HOH A 102 702 171 HOH HOH . J 6 HOH A 103 703 18 HOH HOH . J 6 HOH A 104 704 92 HOH HOH . J 6 HOH A 105 705 69 HOH HOH . J 6 HOH A 106 706 44 HOH HOH . J 6 HOH A 107 707 127 HOH HOH . J 6 HOH A 108 708 65 HOH HOH . J 6 HOH A 109 709 142 HOH HOH . J 6 HOH A 110 710 187 HOH HOH . J 6 HOH A 111 711 139 HOH HOH . J 6 HOH A 112 712 207 HOH HOH . J 6 HOH A 113 713 198 HOH HOH . J 6 HOH A 114 714 191 HOH HOH . J 6 HOH A 115 715 100 HOH HOH . J 6 HOH A 116 716 24 HOH HOH . J 6 HOH A 117 717 153 HOH HOH . J 6 HOH A 118 718 39 HOH HOH . J 6 HOH A 119 719 138 HOH HOH . J 6 HOH A 120 720 97 HOH HOH . J 6 HOH A 121 721 132 HOH HOH . J 6 HOH A 122 722 134 HOH HOH . J 6 HOH A 123 723 189 HOH HOH . J 6 HOH A 124 724 93 HOH HOH . J 6 HOH A 125 725 17 HOH HOH . J 6 HOH A 126 726 181 HOH HOH . J 6 HOH A 127 727 170 HOH HOH . J 6 HOH A 128 728 199 HOH HOH . J 6 HOH A 129 729 193 HOH HOH . J 6 HOH A 130 730 13 HOH HOH . J 6 HOH A 131 731 112 HOH HOH . J 6 HOH A 132 732 54 HOH HOH . J 6 HOH A 133 733 94 HOH HOH . J 6 HOH A 134 734 164 HOH HOH . J 6 HOH A 135 735 48 HOH HOH . J 6 HOH A 136 736 23 HOH HOH . J 6 HOH A 137 737 192 HOH HOH . J 6 HOH A 138 738 177 HOH HOH . J 6 HOH A 139 739 7 HOH HOH . J 6 HOH A 140 740 84 HOH HOH . J 6 HOH A 141 741 6 HOH HOH . J 6 HOH A 142 742 16 HOH HOH . J 6 HOH A 143 743 190 HOH HOH . J 6 HOH A 144 744 11 HOH HOH . J 6 HOH A 145 745 144 HOH HOH . J 6 HOH A 146 746 104 HOH HOH . J 6 HOH A 147 747 67 HOH HOH . J 6 HOH A 148 748 26 HOH HOH . J 6 HOH A 149 749 88 HOH HOH . J 6 HOH A 150 750 204 HOH HOH . J 6 HOH A 151 751 85 HOH HOH . J 6 HOH A 152 752 52 HOH HOH . J 6 HOH A 153 753 43 HOH HOH . J 6 HOH A 154 754 152 HOH HOH . J 6 HOH A 155 755 37 HOH HOH . J 6 HOH A 156 756 73 HOH HOH . J 6 HOH A 157 757 1 HOH HOH . J 6 HOH A 158 758 22 HOH HOH . J 6 HOH A 159 759 89 HOH HOH . J 6 HOH A 160 760 9 HOH HOH . J 6 HOH A 161 761 158 HOH HOH . J 6 HOH A 162 762 47 HOH HOH . J 6 HOH A 163 763 36 HOH HOH . J 6 HOH A 164 764 123 HOH HOH . J 6 HOH A 165 765 77 HOH HOH . J 6 HOH A 166 766 79 HOH HOH . J 6 HOH A 167 767 80 HOH HOH . J 6 HOH A 168 768 201 HOH HOH . J 6 HOH A 169 769 59 HOH HOH . J 6 HOH A 170 770 115 HOH HOH . J 6 HOH A 171 771 114 HOH HOH . J 6 HOH A 172 772 157 HOH HOH . J 6 HOH A 173 773 125 HOH HOH . J 6 HOH A 174 774 188 HOH HOH . J 6 HOH A 175 775 168 HOH HOH . J 6 HOH A 176 776 173 HOH HOH . J 6 HOH A 177 777 98 HOH HOH . J 6 HOH A 178 778 122 HOH HOH . J 6 HOH A 179 779 202 HOH HOH . J 6 HOH A 180 780 131 HOH HOH . J 6 HOH A 181 781 197 HOH HOH . J 6 HOH A 182 782 147 HOH HOH . J 6 HOH A 183 783 195 HOH HOH . J 6 HOH A 184 784 116 HOH HOH . J 6 HOH A 185 785 133 HOH HOH . J 6 HOH A 186 786 96 HOH HOH . J 6 HOH A 187 787 143 HOH HOH . J 6 HOH A 188 788 121 HOH HOH . J 6 HOH A 189 789 41 HOH HOH . J 6 HOH A 190 790 91 HOH HOH . J 6 HOH A 191 791 101 HOH HOH . J 6 HOH A 192 792 194 HOH HOH . J 6 HOH A 193 793 136 HOH HOH . J 6 HOH A 194 794 102 HOH HOH . J 6 HOH A 195 795 150 HOH HOH . J 6 HOH A 196 796 169 HOH HOH . J 6 HOH A 197 797 205 HOH HOH . J 6 HOH A 198 798 200 HOH HOH . J 6 HOH A 199 799 141 HOH HOH . J 6 HOH A 200 800 174 HOH HOH . J 6 HOH A 201 801 103 HOH HOH . J 6 HOH A 202 802 135 HOH HOH . J 6 HOH A 203 803 117 HOH HOH . J 6 HOH A 204 804 183 HOH HOH . J 6 HOH A 205 805 81 HOH HOH . J 6 HOH A 206 806 175 HOH HOH . J 6 HOH A 207 807 105 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x -27.46 _atom_site.Cartn_y -12.622 _atom_site.Cartn_z -9.733 _atom_site.occupancy 0.9 _atom_site.B_iso_or_equiv 61.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #