data_7AKW # _model_server_result.job_id TkYE3ZillvAzo03q8VTrLg _model_server_result.datetime_utc '2024-11-16 17:30:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7akw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 7AKW # _exptl.entry_id 7AKW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.32 _cell.angle_gamma 90 _cell.entry_id 7AKW _cell.length_a 44.405 _cell.length_b 103.396 _cell.length_c 111.381 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AKW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 204 A LYS 204 1_555 D C15 RET . A RET 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 B NZ LYS 204 B LYS 204 1_555 F C15 RET . B RET 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 173 n n C1 H11 LFA sing 174 n n C1 H12 LFA sing 175 n n C1 H13 LFA sing 176 n n C2 C3 LFA sing 177 n n C2 H21 LFA sing 178 n n C2 H22 LFA sing 179 n n C3 C4 LFA sing 180 n n C3 H31 LFA sing 181 n n C3 H32 LFA sing 182 n n C4 C5 LFA sing 183 n n C4 H41 LFA sing 184 n n C4 H42 LFA sing 185 n n C5 C6 LFA sing 186 n n C5 H51 LFA sing 187 n n C5 H52 LFA sing 188 n n C6 C7 LFA sing 189 n n C6 H61 LFA sing 190 n n C6 H62 LFA sing 191 n n C7 C8 LFA sing 192 n n C7 H71 LFA sing 193 n n C7 H72 LFA sing 194 n n C8 C9 LFA sing 195 n n C8 H81 LFA sing 196 n n C8 H82 LFA sing 197 n n C9 C10 LFA sing 198 n n C9 H91 LFA sing 199 n n C9 H92 LFA sing 200 n n C10 C11 LFA sing 201 n n C10 H101 LFA sing 202 n n C10 H102 LFA sing 203 n n C11 C12 LFA sing 204 n n C11 H111 LFA sing 205 n n C11 H112 LFA sing 206 n n C12 C13 LFA sing 207 n n C12 H121 LFA sing 208 n n C12 H122 LFA sing 209 n n C13 C14 LFA sing 210 n n C13 H131 LFA sing 211 n n C13 H132 LFA sing 212 n n C14 C15 LFA sing 213 n n C14 H141 LFA sing 214 n n C14 H142 LFA sing 215 n n C15 C16 LFA sing 216 n n C15 H151 LFA sing 217 n n C15 H152 LFA sing 218 n n C16 C17 LFA sing 219 n n C16 H161 LFA sing 220 n n C16 H162 LFA sing 221 n n C17 C18 LFA sing 222 n n C17 H171 LFA sing 223 n n C17 H172 LFA sing 224 n n C18 C19 LFA sing 225 n n C18 H181 LFA sing 226 n n C18 H182 LFA sing 227 n n C19 C20 LFA sing 228 n n C19 H191 LFA sing 229 n n C19 H192 LFA sing 230 n n C20 H201 LFA sing 231 n n C20 H202 LFA sing 232 n n C20 H203 LFA sing 233 n n # _atom_sites.entry_id 7AKW _atom_sites.fract_transf_matrix[1][1] 0.02252 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000126 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009672 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008978 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LFA A 1 301 301 LFA LFA . D 3 RET A 1 302 204 RET LYR . E 2 LFA B 1 301 301 LFA LFA . F 3 RET B 1 302 204 RET LYR . G 4 HOH A 1 401 48 HOH HOH . G 4 HOH A 2 402 41 HOH HOH . G 4 HOH A 3 403 34 HOH HOH . G 4 HOH A 4 404 2 HOH HOH . G 4 HOH A 5 405 13 HOH HOH . G 4 HOH A 6 406 43 HOH HOH . G 4 HOH A 7 407 4 HOH HOH . G 4 HOH A 8 408 38 HOH HOH . G 4 HOH A 9 409 1 HOH HOH . G 4 HOH A 10 410 32 HOH HOH . G 4 HOH A 11 411 16 HOH HOH . G 4 HOH A 12 412 45 HOH HOH . G 4 HOH A 13 413 42 HOH HOH . G 4 HOH A 14 414 25 HOH HOH . G 4 HOH A 15 415 35 HOH HOH . G 4 HOH A 16 416 9 HOH HOH . G 4 HOH A 17 417 47 HOH HOH . G 4 HOH A 18 418 3 HOH HOH . G 4 HOH A 19 419 11 HOH HOH . G 4 HOH A 20 420 20 HOH HOH . G 4 HOH A 21 421 18 HOH HOH . G 4 HOH A 22 422 50 HOH HOH . G 4 HOH A 23 423 21 HOH HOH . H 4 HOH B 1 401 49 HOH HOH . H 4 HOH B 2 402 8 HOH HOH . H 4 HOH B 3 403 27 HOH HOH . H 4 HOH B 4 404 5 HOH HOH . H 4 HOH B 5 405 15 HOH HOH . H 4 HOH B 6 406 26 HOH HOH . H 4 HOH B 7 407 10 HOH HOH . H 4 HOH B 8 408 40 HOH HOH . H 4 HOH B 9 409 22 HOH HOH . H 4 HOH B 10 410 19 HOH HOH . H 4 HOH B 11 411 44 HOH HOH . H 4 HOH B 12 412 37 HOH HOH . H 4 HOH B 13 413 7 HOH HOH . H 4 HOH B 14 414 14 HOH HOH . H 4 HOH B 15 415 30 HOH HOH . H 4 HOH B 16 416 24 HOH HOH . H 4 HOH B 17 417 51 HOH HOH . H 4 HOH B 18 418 33 HOH HOH . H 4 HOH B 19 419 36 HOH HOH . H 4 HOH B 20 420 23 HOH HOH . H 4 HOH B 21 421 17 HOH HOH . H 4 HOH B 22 422 31 HOH HOH . H 4 HOH B 23 423 46 HOH HOH . H 4 HOH B 24 424 12 HOH HOH . H 4 HOH B 25 425 39 HOH HOH . H 4 HOH B 26 426 6 HOH HOH . H 4 HOH B 27 427 28 HOH HOH . H 4 HOH B 28 428 29 HOH HOH . H 4 HOH B 29 429 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . E 2 13.743 -24.78 25.418 1 60.63 ? C1 LFA 301 B 1 HETATM 2 C C2 LFA . . . E 2 14.305 -24.55 24.034 1 62.92 ? C2 LFA 301 B 1 HETATM 3 C C3 LFA . . . E 2 15.713 -25.063 23.859 1 64.71 ? C3 LFA 301 B 1 HETATM 4 C C4 LFA . . . E 2 16.068 -25.478 22.451 1 57.17 ? C4 LFA 301 B 1 HETATM 5 C C5 LFA . . . E 2 17.175 -24.667 21.831 1 57.71 ? C5 LFA 301 B 1 HETATM 6 C C6 LFA . . . E 2 17.642 -25.172 20.486 1 51.29 ? C6 LFA 301 B 1 HETATM 7 C C7 LFA . . . E 2 16.537 -25.7 19.602 1 57.62 ? C7 LFA 301 B 1 HETATM 8 C C8 LFA . . . E 2 16.53 -25.131 18.206 1 55.57 ? C8 LFA 301 B 1 HETATM 9 C C9 LFA . . . E 2 15.369 -24.209 17.925 1 58.35 ? C9 LFA 301 B 1 HETATM 10 C C10 LFA . . . E 2 15.341 -23.652 16.524 1 59.53 ? C10 LFA 301 B 1 HETATM 11 C C11 LFA . . . E 2 15.039 -22.177 16.445 1 57.17 ? C11 LFA 301 B 1 HETATM 12 C C12 LFA . . . E 2 15.772 -21.457 15.341 1 59.15 ? C12 LFA 301 B 1 HETATM 13 C C13 LFA . . . E 2 15.25 -21.749 13.955 1 59.87 ? C13 LFA 301 B 1 HETATM 14 C C14 LFA . . . E 2 15.609 -20.708 12.921 1 55.45 ? C14 LFA 301 B 1 HETATM 15 C C15 LFA . . . E 2 16.737 -21.105 11.997 1 51.13 ? C15 LFA 301 B 1 HETATM 16 C C16 LFA . . . E 2 16.383 -21.059 10.532 1 53.93 ? C16 LFA 301 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 16 #