data_7AKY # _model_server_result.job_id 5onnsCdDg2v43KsKn539xA _model_server_result.datetime_utc '2024-11-27 06:27:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aky # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":411}' # _entry.id 7AKY # _exptl.entry_id 7AKY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 21 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AKY _cell.length_a 46.525 _cell.length_b 115.796 _cell.length_c 53.529 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AKY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 203 A SER 203 1_555 A N LYR 204 A LYR 204 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C SER 203 A SER 203 1_555 A N LYR 204 A LYR 204 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.339 ? covale ? covale3 A C LYR 204 A LYR 204 1_555 A N ASN 205 A ASN 205 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C LYR 204 A LYR 204 1_555 A N ASN 205 A ASN 205 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 252 n n C1 H11 LFA sing 253 n n C1 H12 LFA sing 254 n n C1 H13 LFA sing 255 n n C2 C3 LFA sing 256 n n C2 H21 LFA sing 257 n n C2 H22 LFA sing 258 n n C3 C4 LFA sing 259 n n C3 H31 LFA sing 260 n n C3 H32 LFA sing 261 n n C4 C5 LFA sing 262 n n C4 H41 LFA sing 263 n n C4 H42 LFA sing 264 n n C5 C6 LFA sing 265 n n C5 H51 LFA sing 266 n n C5 H52 LFA sing 267 n n C6 C7 LFA sing 268 n n C6 H61 LFA sing 269 n n C6 H62 LFA sing 270 n n C7 C8 LFA sing 271 n n C7 H71 LFA sing 272 n n C7 H72 LFA sing 273 n n C8 C9 LFA sing 274 n n C8 H81 LFA sing 275 n n C8 H82 LFA sing 276 n n C9 C10 LFA sing 277 n n C9 H91 LFA sing 278 n n C9 H92 LFA sing 279 n n C10 C11 LFA sing 280 n n C10 H101 LFA sing 281 n n C10 H102 LFA sing 282 n n C11 C12 LFA sing 283 n n C11 H111 LFA sing 284 n n C11 H112 LFA sing 285 n n C12 C13 LFA sing 286 n n C12 H121 LFA sing 287 n n C12 H122 LFA sing 288 n n C13 C14 LFA sing 289 n n C13 H131 LFA sing 290 n n C13 H132 LFA sing 291 n n C14 C15 LFA sing 292 n n C14 H141 LFA sing 293 n n C14 H142 LFA sing 294 n n C15 C16 LFA sing 295 n n C15 H151 LFA sing 296 n n C15 H152 LFA sing 297 n n C16 C17 LFA sing 298 n n C16 H161 LFA sing 299 n n C16 H162 LFA sing 300 n n C17 C18 LFA sing 301 n n C17 H171 LFA sing 302 n n C17 H172 LFA sing 303 n n C18 C19 LFA sing 304 n n C18 H181 LFA sing 305 n n C18 H182 LFA sing 306 n n C19 C20 LFA sing 307 n n C19 H191 LFA sing 308 n n C19 H192 LFA sing 309 n n C20 H201 LFA sing 310 n n C20 H202 LFA sing 311 n n C20 H203 LFA sing 312 n n # _atom_sites.entry_id 7AKY _atom_sites.fract_transf_matrix[1][1] 0.021494 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008636 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018681 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LFA A 1 401 401 LFA LFA . C 2 LFA A 1 402 601 LFA LFA . D 2 LFA A 1 403 701 LFA LFA . E 2 LFA A 1 404 801 LFA LFA . F 2 LFA A 1 405 901 LFA LFA . G 2 LFA A 1 406 1101 LFA LFA . H 2 LFA A 1 407 1201 LFA LFA . I 2 LFA A 1 408 1301 LFA LFA . J 2 LFA A 1 409 1401 LFA LFA . K 2 LFA A 1 410 1501 LFA LFA . L 2 LFA A 1 411 1601 LFA LFA . M 2 LFA A 1 412 1701 LFA LFA . N 2 LFA A 1 413 1801 LFA LFA . O 2 LFA A 1 414 1901 LFA LFA . P 2 LFA A 1 415 2001 LFA LFA . Q 2 LFA A 1 416 2101 LFA LFA . R 2 LFA A 1 417 2301 LFA LFA . S 2 LFA A 1 418 2401 LFA LFA . T 2 LFA A 1 419 2501 LFA LFA . U 2 LFA A 1 420 2601 LFA LFA . V 2 LFA A 1 421 2701 LFA LFA . W 3 97N A 1 422 2801 97N 97N . X 4 HOH A 1 501 65 HOH HOH . X 4 HOH A 2 502 17 HOH HOH . X 4 HOH A 3 503 106 HOH HOH . X 4 HOH A 4 504 22 HOH HOH . X 4 HOH A 5 505 90 HOH HOH . X 4 HOH A 6 506 64 HOH HOH . X 4 HOH A 7 507 86 HOH HOH . X 4 HOH A 8 508 24 HOH HOH . X 4 HOH A 9 509 60 HOH HOH . X 4 HOH A 10 510 10 HOH HOH . X 4 HOH A 11 511 85 HOH HOH . X 4 HOH A 12 512 27 HOH HOH . X 4 HOH A 13 513 61 HOH HOH . X 4 HOH A 14 514 94 HOH HOH . X 4 HOH A 15 515 46 HOH HOH . X 4 HOH A 16 516 99 HOH HOH . X 4 HOH A 17 517 84 HOH HOH . X 4 HOH A 18 518 66 HOH HOH . X 4 HOH A 19 519 19 HOH HOH . X 4 HOH A 20 520 62 HOH HOH . X 4 HOH A 21 521 7 HOH HOH . X 4 HOH A 22 522 96 HOH HOH . X 4 HOH A 23 523 2 HOH HOH . X 4 HOH A 24 524 26 HOH HOH . X 4 HOH A 25 525 47 HOH HOH . X 4 HOH A 26 526 91 HOH HOH . X 4 HOH A 27 527 23 HOH HOH . X 4 HOH A 28 528 50 HOH HOH . X 4 HOH A 29 529 25 HOH HOH . X 4 HOH A 30 530 3 HOH HOH . X 4 HOH A 31 531 5 HOH HOH . X 4 HOH A 32 532 35 HOH HOH . X 4 HOH A 33 533 12 HOH HOH . X 4 HOH A 34 534 13 HOH HOH . X 4 HOH A 35 535 18 HOH HOH . X 4 HOH A 36 536 1 HOH HOH . X 4 HOH A 37 537 4 HOH HOH . X 4 HOH A 38 538 36 HOH HOH . X 4 HOH A 39 539 11 HOH HOH . X 4 HOH A 40 540 44 HOH HOH . X 4 HOH A 41 541 6 HOH HOH . X 4 HOH A 42 542 20 HOH HOH . X 4 HOH A 43 543 95 HOH HOH . X 4 HOH A 44 544 28 HOH HOH . X 4 HOH A 45 545 9 HOH HOH . X 4 HOH A 46 546 69 HOH HOH . X 4 HOH A 47 547 88 HOH HOH . X 4 HOH A 48 548 57 HOH HOH . X 4 HOH A 49 549 102 HOH HOH . X 4 HOH A 50 550 8 HOH HOH . X 4 HOH A 51 551 43 HOH HOH . X 4 HOH A 52 552 34 HOH HOH . X 4 HOH A 53 553 73 HOH HOH . X 4 HOH A 54 554 92 HOH HOH . X 4 HOH A 55 555 98 HOH HOH . X 4 HOH A 56 556 77 HOH HOH . X 4 HOH A 57 557 58 HOH HOH . X 4 HOH A 58 558 78 HOH HOH . X 4 HOH A 59 559 33 HOH HOH . X 4 HOH A 60 560 82 HOH HOH . X 4 HOH A 61 561 21 HOH HOH . X 4 HOH A 62 562 56 HOH HOH . X 4 HOH A 63 563 48 HOH HOH . X 4 HOH A 64 564 41 HOH HOH . X 4 HOH A 65 565 15 HOH HOH . X 4 HOH A 66 566 80 HOH HOH . X 4 HOH A 67 567 53 HOH HOH . X 4 HOH A 68 568 16 HOH HOH . X 4 HOH A 69 569 81 HOH HOH . X 4 HOH A 70 570 45 HOH HOH . X 4 HOH A 71 571 87 HOH HOH . X 4 HOH A 72 572 63 HOH HOH . X 4 HOH A 73 573 52 HOH HOH . X 4 HOH A 74 574 76 HOH HOH . X 4 HOH A 75 575 67 HOH HOH . X 4 HOH A 76 576 42 HOH HOH . X 4 HOH A 77 577 70 HOH HOH . X 4 HOH A 78 578 83 HOH HOH . X 4 HOH A 79 579 29 HOH HOH . X 4 HOH A 80 580 79 HOH HOH . X 4 HOH A 81 581 14 HOH HOH . X 4 HOH A 82 582 75 HOH HOH . X 4 HOH A 83 583 104 HOH HOH . X 4 HOH A 84 584 105 HOH HOH . X 4 HOH A 85 585 38 HOH HOH . X 4 HOH A 86 586 30 HOH HOH . X 4 HOH A 87 587 54 HOH HOH . X 4 HOH A 88 588 74 HOH HOH . X 4 HOH A 89 589 49 HOH HOH . X 4 HOH A 90 590 89 HOH HOH . X 4 HOH A 91 591 39 HOH HOH . X 4 HOH A 92 592 32 HOH HOH . X 4 HOH A 93 593 59 HOH HOH . X 4 HOH A 94 594 37 HOH HOH . X 4 HOH A 95 595 101 HOH HOH . X 4 HOH A 96 596 55 HOH HOH . X 4 HOH A 97 597 100 HOH HOH . X 4 HOH A 98 598 97 HOH HOH . X 4 HOH A 99 599 40 HOH HOH . X 4 HOH A 100 600 93 HOH HOH . X 4 HOH A 101 601 72 HOH HOH . X 4 HOH A 102 602 103 HOH HOH . X 4 HOH A 103 603 31 HOH HOH . X 4 HOH A 104 604 68 HOH HOH . X 4 HOH A 105 605 71 HOH HOH . X 4 HOH A 106 606 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C16 LFA . . . L 2 -21.344 3.691 -2.921 1 61.48 ? C16 LFA 411 A 1 HETATM 2 C C17 LFA . . . L 2 -20.451 2.749 -2.149 1 50.13 ? C17 LFA 411 A 1 HETATM 3 C C18 LFA . . . L 2 -19.788 3.374 -0.947 1 44.6 ? C18 LFA 411 A 1 HETATM 4 C C19 LFA . . . L 2 -19.403 2.396 0.13 1 39.49 ? C19 LFA 411 A 1 HETATM 5 C C20 LFA . . . L 2 -20.21 2.554 1.396 1 47.63 ? C20 LFA 411 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #