data_7AL4
#
_model_server_result.job_id            rt3GzBnX9rd6Hir7evQN_Q 
_model_server_result.datetime_utc      '2024-10-20 03:37:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7al4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":601}' 
#
_entry.id    7AL4 
#
_exptl.entry_id    7AL4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.12 
_cell.angle_gamma         90 
_cell.entry_id            7AL4 
_cell.length_a            115.919 
_cell.length_b            92.453 
_cell.length_c            156.688 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AL4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I,J,R,S,T,U,V,W,X,AA 1 1 
B,C,K,L,M,N,O,P,Q,Y,Z 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 K N N 
? 2 M N N 
? 2 R N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     7AL4 
_atom_sites.fract_transf_matrix[1][1]    0.008627 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000773 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010816 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006408 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD D 1 601 540 FAD FAD . 
F 3 NAP D 1 602 541 NAP NAP . 
G 4 LMT D 1 603 602 LMT LMT . 
H 5 GOL D 1 604 1201 GOL GOL . 
I 6 CL D 1 605 1401 CL CL . 
J 5 GOL D 1 606 1501 GOL GOL . 
K 2 FAD C 1 601 540 FAD FAD . 
L 3 NAP C 1 602 541 NAP NAP . 
M 2 FAD B 1 601 540 FAD FAD . 
N 3 NAP B 1 602 541 NAP NAP . 
O 4 LMT B 1 603 601 LMT LMT . 
P 4 LMT B 1 604 603 LMT LMT . 
Q 6 CL B 1 605 1301 CL CL . 
R 2 FAD A 1 601 540 FAD FAD . 
S 3 NAP A 1 602 541 NAP NAP . 
T 4 LMT A 1 603 801 LMT LMT . 
U 6 CL A 1 604 901 CL CL . 
V 4 LMT A 1 605 1001 LMT LMT . 
W 4 LMT A 1 606 1101 LMT LMT . 
X 7 HOH D 1 701 232 HOH HOH . 
X 7 HOH D 2 702 6 HOH HOH . 
X 7 HOH D 3 703 228 HOH HOH . 
X 7 HOH D 4 704 250 HOH HOH . 
X 7 HOH D 5 705 71 HOH HOH . 
X 7 HOH D 6 706 252 HOH HOH . 
X 7 HOH D 7 707 24 HOH HOH . 
X 7 HOH D 8 708 244 HOH HOH . 
X 7 HOH D 9 709 269 HOH HOH . 
X 7 HOH D 10 710 9 HOH HOH . 
X 7 HOH D 11 711 26 HOH HOH . 
X 7 HOH D 12 712 231 HOH HOH . 
X 7 HOH D 13 713 233 HOH HOH . 
X 7 HOH D 14 714 236 HOH HOH . 
X 7 HOH D 15 715 129 HOH HOH . 
X 7 HOH D 16 716 235 HOH HOH . 
Y 7 HOH C 1 701 260 HOH HOH . 
Y 7 HOH C 2 702 60 HOH HOH . 
Y 7 HOH C 3 703 246 HOH HOH . 
Y 7 HOH C 4 704 154 HOH HOH . 
Y 7 HOH C 5 705 97 HOH HOH . 
Z 7 HOH B 1 701 259 HOH HOH . 
Z 7 HOH B 2 702 255 HOH HOH . 
Z 7 HOH B 3 703 85 HOH HOH . 
Z 7 HOH B 4 704 27 HOH HOH . 
Z 7 HOH B 5 705 238 HOH HOH . 
Z 7 HOH B 6 706 90 HOH HOH . 
Z 7 HOH B 7 707 106 HOH HOH . 
Z 7 HOH B 8 708 256 HOH HOH . 
AA 7 HOH A 1 701 141 HOH HOH . 
AA 7 HOH A 2 702 257 HOH HOH . 
AA 7 HOH A 3 703 242 HOH HOH . 
AA 7 HOH A 4 704 258 HOH HOH . 
AA 7 HOH A 5 705 29 HOH HOH . 
AA 7 HOH A 6 706 275 HOH HOH . 
AA 7 HOH A 7 707 253 HOH HOH . 
AA 7 HOH A 8 708 274 HOH HOH . 
AA 7 HOH A 9 709 230 HOH HOH . 
AA 7 HOH A 10 710 270 HOH HOH . 
AA 7 HOH A 11 711 237 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . K 2 -103.389 -7.808 32.218 1 125.09 ? PA FAD 601 C 1 
HETATM 2 O O1A FAD . . . K 2 -102.586 -6.749 31.533 1 117.87 ? O1A FAD 601 C 1 
HETATM 3 O O2A FAD . . . K 2 -103.962 -8.93 31.417 1 125.21 ? O2A FAD 601 C 1 
HETATM 4 O O5B FAD . . . K 2 -104.573 -7.112 33.035 1 133.63 ? O5B FAD 601 C 1 
HETATM 5 C C5B FAD . . . K 2 -104.294 -5.896 33.76 1 136.22 ? C5B FAD 601 C 1 
HETATM 6 C C4B FAD . . . K 2 -105.598 -5.187 33.999 1 137.85 ? C4B FAD 601 C 1 
HETATM 7 O O4B FAD . . . K 2 -105.365 -4.064 34.882 1 138.6 ? O4B FAD 601 C 1 
HETATM 8 C C3B FAD . . . K 2 -106.266 -4.62 32.737 1 141.55 ? C3B FAD 601 C 1 
HETATM 9 O O3B FAD . . . K 2 -107.633 -5.005 32.663 1 148.91 ? O3B FAD 601 C 1 
HETATM 10 C C2B FAD . . . K 2 -106.092 -3.106 32.889 1 141.89 ? C2B FAD 601 C 1 
HETATM 11 O O2B FAD . . . K 2 -107.156 -2.408 32.281 1 145.49 ? O2B FAD 601 C 1 
HETATM 12 C C1B FAD . . . K 2 -106.08 -2.952 34.407 1 143.2 ? C1B FAD 601 C 1 
HETATM 13 N N9A FAD . . . K 2 -105.425 -1.757 34.917 1 144.39 ? N9A FAD 601 C 1 
HETATM 14 C C8A FAD . . . K 2 -104.183 -1.272 34.585 1 143.28 ? C8A FAD 601 C 1 
HETATM 15 N N7A FAD . . . K 2 -103.885 -0.17 35.235 1 139.72 ? N7A FAD 601 C 1 
HETATM 16 C C5A FAD . . . K 2 -104.99 0.071 36.044 1 137.76 ? C5A FAD 601 C 1 
HETATM 17 C C6A FAD . . . K 2 -105.288 1.087 36.97 1 138.1 ? C6A FAD 601 C 1 
HETATM 18 N N6A FAD . . . K 2 -104.464 2.089 37.256 1 147.37 ? N6A FAD 601 C 1 
HETATM 19 N N1A FAD . . . K 2 -106.484 1.023 37.604 1 135.38 ? N1A FAD 601 C 1 
HETATM 20 C C2A FAD . . . K 2 -107.31 0.008 37.317 1 130.7 ? C2A FAD 601 C 1 
HETATM 21 N N3A FAD . . . K 2 -107.138 -0.997 36.463 1 132.4 ? N3A FAD 601 C 1 
HETATM 22 C C4A FAD . . . K 2 -105.944 -0.904 35.855 1 139.09 ? C4A FAD 601 C 1 
HETATM 23 N N1 FAD . . . K 2 -99.688 -16.207 29.593 1 126.78 ? N1 FAD 601 C 1 
HETATM 24 C C2 FAD . . . K 2 -99.978 -17.519 29.751 1 124.4 ? C2 FAD 601 C 1 
HETATM 25 O O2 FAD . . . K 2 -99.933 -18.047 30.86 1 128.82 ? O2 FAD 601 C 1 
HETATM 26 N N3 FAD . . . K 2 -100.326 -18.312 28.71 1 121.73 ? N3 FAD 601 C 1 
HETATM 27 C C4 FAD . . . K 2 -100.403 -17.831 27.429 1 120.24 ? C4 FAD 601 C 1 
HETATM 28 O O4 FAD . . . K 2 -100.719 -18.583 26.519 1 116.44 ? O4 FAD 601 C 1 
HETATM 29 C C4X FAD . . . K 2 -100.115 -16.468 27.22 1 121.39 ? C4X FAD 601 C 1 
HETATM 30 N N5 FAD . . . K 2 -100.197 -15.997 26.008 1 117.47 ? N5 FAD 601 C 1 
HETATM 31 C C5X FAD . . . K 2 -99.924 -14.669 25.831 1 120 ? C5X FAD 601 C 1 
HETATM 32 C C6 FAD . . . K 2 -100.019 -14.162 24.525 1 120.23 ? C6 FAD 601 C 1 
HETATM 33 C C7 FAD . . . K 2 -99.77 -12.841 24.245 1 125.26 ? C7 FAD 601 C 1 
HETATM 34 C C7M FAD . . . K 2 -99.907 -12.346 22.828 1 130.67 ? C7M FAD 601 C 1 
HETATM 35 C C8 FAD . . . K 2 -99.395 -11.964 25.297 1 120.3 ? C8 FAD 601 C 1 
HETATM 36 C C8M FAD . . . K 2 -99.101 -10.512 25.009 1 118.89 ? C8M FAD 601 C 1 
HETATM 37 C C9 FAD . . . K 2 -99.293 -12.454 26.593 1 120.22 ? C9 FAD 601 C 1 
HETATM 38 C C9A FAD . . . K 2 -99.555 -13.807 26.889 1 122.04 ? C9A FAD 601 C 1 
HETATM 39 N N10 FAD . . . K 2 -99.474 -14.348 28.177 1 124.5 ? N10 FAD 601 C 1 
HETATM 40 C C10 FAD . . . K 2 -99.755 -15.695 28.383 1 125.62 ? C10 FAD 601 C 1 
HETATM 41 C C1' FAD . . . K 2 -99.102 -13.501 29.333 1 121.39 ? C1' FAD 601 C 1 
HETATM 42 C C2' FAD . . . K 2 -100.255 -12.653 29.869 1 119.56 ? C2' FAD 601 C 1 
HETATM 43 O O2' FAD . . . K 2 -99.705 -11.5 30.504 1 125.9 ? O2' FAD 601 C 1 
HETATM 44 C C3' FAD . . . K 2 -101.138 -13.393 30.882 1 113.22 ? C3' FAD 601 C 1 
HETATM 45 O O3' FAD . . . K 2 -101.632 -14.583 30.284 1 110.22 ? O3' FAD 601 C 1 
HETATM 46 C C4' FAD . . . K 2 -102.332 -12.599 31.427 1 112.25 ? C4' FAD 601 C 1 
HETATM 47 O O4' FAD . . . K 2 -102.771 -11.648 30.455 1 101.24 ? O4' FAD 601 C 1 
HETATM 48 C C5' FAD . . . K 2 -102.006 -11.893 32.725 1 117.87 ? C5' FAD 601 C 1 
HETATM 49 O O5' FAD . . . K 2 -102.971 -10.859 33.068 1 123.3 ? O5' FAD 601 C 1 
HETATM 50 P P FAD . . . K 2 -102.612 -9.82 34.24 1 125.32 ? P FAD 601 C 1 
HETATM 51 O O1P FAD . . . K 2 -103.76 -9.789 35.195 1 130.22 ? O1P FAD 601 C 1 
HETATM 52 O O2P FAD . . . K 2 -101.252 -10.118 34.785 1 117.55 ? O2P FAD 601 C 1 
HETATM 53 O O3P FAD . . . K 2 -102.536 -8.435 33.425 1 124.36 ? O3P FAD 601 C 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           53 
#