data_7AL4
#
_model_server_result.job_id            7L0JSMFYUIeOm6tzv66XMA 
_model_server_result.datetime_utc      '2024-10-20 03:43:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7al4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":602}' 
#
_entry.id    7AL4 
#
_exptl.entry_id    7AL4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.12 
_cell.angle_gamma         90 
_cell.entry_id            7AL4 
_cell.length_a            115.919 
_cell.length_b            92.453 
_cell.length_c            156.688 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AL4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I,J,R,S,T,U,V,W,X,AA 1 1 
B,C,K,L,M,N,O,P,Q,Y,Z 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 L N N 
? 3 N N N 
? 3 S N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 423 n n 
PA O2A NAP sing 424 n n 
PA O5B NAP sing 425 n n 
PA O3 NAP sing 426 n n 
O2A HOA2 NAP sing 427 n n 
O5B C5B NAP sing 428 n n 
C5B C4B NAP sing 429 n n 
C5B H51A NAP sing 430 n n 
C5B H52A NAP sing 431 n n 
C4B O4B NAP sing 432 n n 
C4B C3B NAP sing 433 n n 
C4B H4B NAP sing 434 n n 
O4B C1B NAP sing 435 n n 
C3B O3B NAP sing 436 n n 
C3B C2B NAP sing 437 n n 
C3B H3B NAP sing 438 n n 
O3B HO3A NAP sing 439 n n 
C2B O2B NAP sing 440 n n 
C2B C1B NAP sing 441 n n 
C2B H2B NAP sing 442 n n 
O2B P2B NAP sing 443 n n 
C1B N9A NAP sing 444 n n 
C1B H1B NAP sing 445 n n 
N9A C8A NAP sing 446 n y 
N9A C4A NAP sing 447 n y 
C8A N7A NAP doub 448 n y 
C8A H8A NAP sing 449 n n 
N7A C5A NAP sing 450 n y 
C5A C6A NAP sing 451 n y 
C5A C4A NAP doub 452 n y 
C6A N6A NAP sing 453 n n 
C6A N1A NAP doub 454 n y 
N6A H61A NAP sing 455 n n 
N6A H62A NAP sing 456 n n 
N1A C2A NAP sing 457 n y 
C2A N3A NAP doub 458 n y 
C2A H2A NAP sing 459 n n 
N3A C4A NAP sing 460 n y 
O3 PN NAP sing 461 n n 
PN O1N NAP doub 462 n n 
PN O2N NAP sing 463 n n 
PN O5D NAP sing 464 n n 
O5D C5D NAP sing 465 n n 
C5D C4D NAP sing 466 n n 
C5D H51N NAP sing 467 n n 
C5D H52N NAP sing 468 n n 
C4D O4D NAP sing 469 n n 
C4D C3D NAP sing 470 n n 
C4D H4D NAP sing 471 n n 
O4D C1D NAP sing 472 n n 
C3D O3D NAP sing 473 n n 
C3D C2D NAP sing 474 n n 
C3D H3D NAP sing 475 n n 
O3D HO3N NAP sing 476 n n 
C2D O2D NAP sing 477 n n 
C2D C1D NAP sing 478 n n 
C2D H2D NAP sing 479 n n 
O2D HO2N NAP sing 480 n n 
C1D N1N NAP sing 481 n n 
C1D H1D NAP sing 482 n n 
N1N C2N NAP sing 483 n y 
N1N C6N NAP doub 484 n y 
C2N C3N NAP doub 485 n y 
C2N H2N NAP sing 486 n n 
C3N C7N NAP sing 487 n n 
C3N C4N NAP sing 488 n y 
C7N O7N NAP doub 489 n n 
C7N N7N NAP sing 490 n n 
N7N H71N NAP sing 491 n n 
N7N H72N NAP sing 492 n n 
C4N C5N NAP doub 493 n y 
C4N H4N NAP sing 494 n n 
C5N C6N NAP sing 495 n y 
C5N H5N NAP sing 496 n n 
C6N H6N NAP sing 497 n n 
P2B O1X NAP doub 498 n n 
P2B O2X NAP sing 499 n n 
P2B O3X NAP sing 500 n n 
O2X HOP2 NAP sing 501 n n 
O3X HOP3 NAP sing 502 n n 
#
_atom_sites.entry_id                     7AL4 
_atom_sites.fract_transf_matrix[1][1]    0.008627 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000773 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010816 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006408 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD D 1 601 540 FAD FAD . 
F 3 NAP D 1 602 541 NAP NAP . 
G 4 LMT D 1 603 602 LMT LMT . 
H 5 GOL D 1 604 1201 GOL GOL . 
I 6 CL D 1 605 1401 CL CL . 
J 5 GOL D 1 606 1501 GOL GOL . 
K 2 FAD C 1 601 540 FAD FAD . 
L 3 NAP C 1 602 541 NAP NAP . 
M 2 FAD B 1 601 540 FAD FAD . 
N 3 NAP B 1 602 541 NAP NAP . 
O 4 LMT B 1 603 601 LMT LMT . 
P 4 LMT B 1 604 603 LMT LMT . 
Q 6 CL B 1 605 1301 CL CL . 
R 2 FAD A 1 601 540 FAD FAD . 
S 3 NAP A 1 602 541 NAP NAP . 
T 4 LMT A 1 603 801 LMT LMT . 
U 6 CL A 1 604 901 CL CL . 
V 4 LMT A 1 605 1001 LMT LMT . 
W 4 LMT A 1 606 1101 LMT LMT . 
X 7 HOH D 1 701 232 HOH HOH . 
X 7 HOH D 2 702 6 HOH HOH . 
X 7 HOH D 3 703 228 HOH HOH . 
X 7 HOH D 4 704 250 HOH HOH . 
X 7 HOH D 5 705 71 HOH HOH . 
X 7 HOH D 6 706 252 HOH HOH . 
X 7 HOH D 7 707 24 HOH HOH . 
X 7 HOH D 8 708 244 HOH HOH . 
X 7 HOH D 9 709 269 HOH HOH . 
X 7 HOH D 10 710 9 HOH HOH . 
X 7 HOH D 11 711 26 HOH HOH . 
X 7 HOH D 12 712 231 HOH HOH . 
X 7 HOH D 13 713 233 HOH HOH . 
X 7 HOH D 14 714 236 HOH HOH . 
X 7 HOH D 15 715 129 HOH HOH . 
X 7 HOH D 16 716 235 HOH HOH . 
Y 7 HOH C 1 701 260 HOH HOH . 
Y 7 HOH C 2 702 60 HOH HOH . 
Y 7 HOH C 3 703 246 HOH HOH . 
Y 7 HOH C 4 704 154 HOH HOH . 
Y 7 HOH C 5 705 97 HOH HOH . 
Z 7 HOH B 1 701 259 HOH HOH . 
Z 7 HOH B 2 702 255 HOH HOH . 
Z 7 HOH B 3 703 85 HOH HOH . 
Z 7 HOH B 4 704 27 HOH HOH . 
Z 7 HOH B 5 705 238 HOH HOH . 
Z 7 HOH B 6 706 90 HOH HOH . 
Z 7 HOH B 7 707 106 HOH HOH . 
Z 7 HOH B 8 708 256 HOH HOH . 
AA 7 HOH A 1 701 141 HOH HOH . 
AA 7 HOH A 2 702 257 HOH HOH . 
AA 7 HOH A 3 703 242 HOH HOH . 
AA 7 HOH A 4 704 258 HOH HOH . 
AA 7 HOH A 5 705 29 HOH HOH . 
AA 7 HOH A 6 706 275 HOH HOH . 
AA 7 HOH A 7 707 253 HOH HOH . 
AA 7 HOH A 8 708 274 HOH HOH . 
AA 7 HOH A 9 709 230 HOH HOH . 
AA 7 HOH A 10 710 270 HOH HOH . 
AA 7 HOH A 11 711 237 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . F 3 -56.471 -28.309 -52.022 1 72.4 ? PA NAP 602 D 1 
HETATM 2 O O1A NAP . . . F 3 -55.523 -29.477 -52.043 1 65.67 ? O1A NAP 602 D 1 
HETATM 3 O O2A NAP . . . F 3 -55.98 -26.945 -51.59 1 74.81 ? O2A NAP 602 D 1 
HETATM 4 O O5B NAP . . . F 3 -57.713 -28.673 -51.083 1 81.94 ? O5B NAP 602 D 1 
HETATM 5 C C5B NAP . . . F 3 -57.985 -30.025 -50.756 1 89.01 ? C5B NAP 602 D 1 
HETATM 6 C C4B NAP . . . F 3 -58.308 -30.097 -49.275 1 90.55 ? C4B NAP 602 D 1 
HETATM 7 O O4B NAP . . . F 3 -59.218 -31.173 -49.04 1 89.55 ? O4B NAP 602 D 1 
HETATM 8 C C3B NAP . . . F 3 -57.098 -30.348 -48.381 1 91.62 ? C3B NAP 602 D 1 
HETATM 9 O O3B NAP . . . F 3 -56.407 -29.143 -48.027 1 87.41 ? O3B NAP 602 D 1 
HETATM 10 C C2B NAP . . . F 3 -57.725 -31.032 -47.187 1 92.65 ? C2B NAP 602 D 1 
HETATM 11 O O2B NAP . . . F 3 -58.181 -30.059 -46.247 1 94.93 ? O2B NAP 602 D 1 
HETATM 12 C C1B NAP . . . F 3 -58.919 -31.775 -47.781 1 92.67 ? C1B NAP 602 D 1 
HETATM 13 N N9A NAP . . . F 3 -58.657 -33.222 -47.974 1 91.48 ? N9A NAP 602 D 1 
HETATM 14 C C8A NAP . . . F 3 -57.766 -33.787 -48.813 1 86.43 ? C8A NAP 602 D 1 
HETATM 15 N N7A NAP . . . F 3 -57.824 -35.138 -48.71 1 86.93 ? N7A NAP 602 D 1 
HETATM 16 C C5A NAP . . . F 3 -58.768 -35.438 -47.795 1 86.88 ? C5A NAP 602 D 1 
HETATM 17 C C6A NAP . . . F 3 -59.345 -36.66 -47.206 1 85.3 ? C6A NAP 602 D 1 
HETATM 18 N N6A NAP . . . F 3 -58.891 -37.868 -47.603 1 88.57 ? N6A NAP 602 D 1 
HETATM 19 N N1A NAP . . . F 3 -60.327 -36.532 -46.278 1 84.63 ? N1A NAP 602 D 1 
HETATM 20 C C2A NAP . . . F 3 -60.793 -35.334 -45.875 1 84.39 ? C2A NAP 602 D 1 
HETATM 21 N N3A NAP . . . F 3 -60.313 -34.18 -46.368 1 86.69 ? N3A NAP 602 D 1 
HETATM 22 C C4A NAP . . . F 3 -59.322 -34.172 -47.31 1 90.55 ? C4A NAP 602 D 1 
HETATM 23 O O3 NAP . . . F 3 -57.242 -28.188 -53.437 1 77.78 ? O3 NAP 602 D 1 
HETATM 24 P PN NAP . . . F 3 -58.177 -26.925 -53.858 1 83.11 ? PN NAP 602 D 1 
HETATM 25 O O1N NAP . . . F 3 -58.397 -26.033 -52.649 1 82.73 ? O1N NAP 602 D 1 
HETATM 26 O O2N NAP . . . F 3 -59.398 -27.411 -54.62 1 80.42 ? O2N NAP 602 D 1 
HETATM 27 O O5D NAP . . . F 3 -57.254 -26.152 -54.939 1 80.03 ? O5D NAP 602 D 1 
HETATM 28 C C5D NAP . . . F 3 -55.839 -26.345 -55.056 1 76.81 ? C5D NAP 602 D 1 
HETATM 29 C C4D NAP . . . F 3 -55.187 -25.052 -55.517 1 75.09 ? C4D NAP 602 D 1 
HETATM 30 O O4D NAP . . . F 3 -56.115 -24.308 -56.308 1 72.81 ? O4D NAP 602 D 1 
HETATM 31 C C3D NAP . . . F 3 -54.784 -24.114 -54.381 1 74.66 ? C3D NAP 602 D 1 
HETATM 32 O O3D NAP . . . F 3 -53.494 -24.377 -53.819 1 74.02 ? O3D NAP 602 D 1 
HETATM 33 C C2D NAP . . . F 3 -54.825 -22.769 -55.063 1 74.91 ? C2D NAP 602 D 1 
HETATM 34 O O2D NAP . . . F 3 -53.61 -22.531 -55.793 1 74.81 ? O2D NAP 602 D 1 
HETATM 35 C C1D NAP . . . F 3 -55.976 -22.898 -56.052 1 77.11 ? C1D NAP 602 D 1 
HETATM 36 N N1N NAP . . . F 3 -57.247 -22.268 -55.604 1 83.96 ? N1N NAP 602 D 1 
HETATM 37 C C2N NAP . . . F 3 -57.28 -20.948 -55.281 1 88.86 ? C2N NAP 602 D 1 
HETATM 38 C C3N NAP . . . F 3 -58.463 -20.302 -54.868 1 90.74 ? C3N NAP 602 D 1 
HETATM 39 C C7N NAP . . . F 3 -58.539 -18.842 -54.495 1 89.8 ? C7N NAP 602 D 1 
HETATM 40 O O7N NAP . . . F 3 -58.693 -18.495 -53.322 1 87.04 ? O7N NAP 602 D 1 
HETATM 41 N N7N NAP . . . F 3 -58.465 -17.968 -55.501 1 87.76 ? N7N NAP 602 D 1 
HETATM 42 C C4N NAP . . . F 3 -59.632 -21.044 -54.816 1 90.53 ? C4N NAP 602 D 1 
HETATM 43 C C5N NAP . . . F 3 -59.59 -22.391 -55.16 1 88.3 ? C5N NAP 602 D 1 
HETATM 44 C C6N NAP . . . F 3 -58.391 -22.987 -55.558 1 86.81 ? C6N NAP 602 D 1 
HETATM 45 P P2B NAP . . . F 3 -58.439 -30.361 -44.685 1 94 ? P2B NAP 602 D 1 
HETATM 46 O O1X NAP . . . F 3 -57.048 -30.762 -44.247 1 98.74 ? O1X NAP 602 D 1 
HETATM 47 O O2X NAP . . . F 3 -58.891 -29.031 -44.13 1 90.51 ? O2X NAP 602 D 1 
HETATM 48 O O3X NAP . . . F 3 -59.514 -31.436 -44.643 1 87.26 ? O3X NAP 602 D 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#