data_7AL4
#
_model_server_result.job_id            o6YWd9OkKF2kSrQb-F_Qpw 
_model_server_result.datetime_utc      '2024-10-20 03:35:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7al4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":602}' 
#
_entry.id    7AL4 
#
_exptl.entry_id    7AL4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.12 
_cell.angle_gamma         90 
_cell.entry_id            7AL4 
_cell.length_a            115.919 
_cell.length_b            92.453 
_cell.length_c            156.688 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AL4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I,J,R,S,T,U,V,W,X,AA 1 1 
B,C,K,L,M,N,O,P,Q,Y,Z 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 L N N 
? 3 N N N 
? 3 S N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 423 n n 
PA O2A NAP sing 424 n n 
PA O5B NAP sing 425 n n 
PA O3 NAP sing 426 n n 
O2A HOA2 NAP sing 427 n n 
O5B C5B NAP sing 428 n n 
C5B C4B NAP sing 429 n n 
C5B H51A NAP sing 430 n n 
C5B H52A NAP sing 431 n n 
C4B O4B NAP sing 432 n n 
C4B C3B NAP sing 433 n n 
C4B H4B NAP sing 434 n n 
O4B C1B NAP sing 435 n n 
C3B O3B NAP sing 436 n n 
C3B C2B NAP sing 437 n n 
C3B H3B NAP sing 438 n n 
O3B HO3A NAP sing 439 n n 
C2B O2B NAP sing 440 n n 
C2B C1B NAP sing 441 n n 
C2B H2B NAP sing 442 n n 
O2B P2B NAP sing 443 n n 
C1B N9A NAP sing 444 n n 
C1B H1B NAP sing 445 n n 
N9A C8A NAP sing 446 n y 
N9A C4A NAP sing 447 n y 
C8A N7A NAP doub 448 n y 
C8A H8A NAP sing 449 n n 
N7A C5A NAP sing 450 n y 
C5A C6A NAP sing 451 n y 
C5A C4A NAP doub 452 n y 
C6A N6A NAP sing 453 n n 
C6A N1A NAP doub 454 n y 
N6A H61A NAP sing 455 n n 
N6A H62A NAP sing 456 n n 
N1A C2A NAP sing 457 n y 
C2A N3A NAP doub 458 n y 
C2A H2A NAP sing 459 n n 
N3A C4A NAP sing 460 n y 
O3 PN NAP sing 461 n n 
PN O1N NAP doub 462 n n 
PN O2N NAP sing 463 n n 
PN O5D NAP sing 464 n n 
O5D C5D NAP sing 465 n n 
C5D C4D NAP sing 466 n n 
C5D H51N NAP sing 467 n n 
C5D H52N NAP sing 468 n n 
C4D O4D NAP sing 469 n n 
C4D C3D NAP sing 470 n n 
C4D H4D NAP sing 471 n n 
O4D C1D NAP sing 472 n n 
C3D O3D NAP sing 473 n n 
C3D C2D NAP sing 474 n n 
C3D H3D NAP sing 475 n n 
O3D HO3N NAP sing 476 n n 
C2D O2D NAP sing 477 n n 
C2D C1D NAP sing 478 n n 
C2D H2D NAP sing 479 n n 
O2D HO2N NAP sing 480 n n 
C1D N1N NAP sing 481 n n 
C1D H1D NAP sing 482 n n 
N1N C2N NAP sing 483 n y 
N1N C6N NAP doub 484 n y 
C2N C3N NAP doub 485 n y 
C2N H2N NAP sing 486 n n 
C3N C7N NAP sing 487 n n 
C3N C4N NAP sing 488 n y 
C7N O7N NAP doub 489 n n 
C7N N7N NAP sing 490 n n 
N7N H71N NAP sing 491 n n 
N7N H72N NAP sing 492 n n 
C4N C5N NAP doub 493 n y 
C4N H4N NAP sing 494 n n 
C5N C6N NAP sing 495 n y 
C5N H5N NAP sing 496 n n 
C6N H6N NAP sing 497 n n 
P2B O1X NAP doub 498 n n 
P2B O2X NAP sing 499 n n 
P2B O3X NAP sing 500 n n 
O2X HOP2 NAP sing 501 n n 
O3X HOP3 NAP sing 502 n n 
#
_atom_sites.entry_id                     7AL4 
_atom_sites.fract_transf_matrix[1][1]    0.008627 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000773 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010816 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006408 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD D 1 601 540 FAD FAD . 
F 3 NAP D 1 602 541 NAP NAP . 
G 4 LMT D 1 603 602 LMT LMT . 
H 5 GOL D 1 604 1201 GOL GOL . 
I 6 CL D 1 605 1401 CL CL . 
J 5 GOL D 1 606 1501 GOL GOL . 
K 2 FAD C 1 601 540 FAD FAD . 
L 3 NAP C 1 602 541 NAP NAP . 
M 2 FAD B 1 601 540 FAD FAD . 
N 3 NAP B 1 602 541 NAP NAP . 
O 4 LMT B 1 603 601 LMT LMT . 
P 4 LMT B 1 604 603 LMT LMT . 
Q 6 CL B 1 605 1301 CL CL . 
R 2 FAD A 1 601 540 FAD FAD . 
S 3 NAP A 1 602 541 NAP NAP . 
T 4 LMT A 1 603 801 LMT LMT . 
U 6 CL A 1 604 901 CL CL . 
V 4 LMT A 1 605 1001 LMT LMT . 
W 4 LMT A 1 606 1101 LMT LMT . 
X 7 HOH D 1 701 232 HOH HOH . 
X 7 HOH D 2 702 6 HOH HOH . 
X 7 HOH D 3 703 228 HOH HOH . 
X 7 HOH D 4 704 250 HOH HOH . 
X 7 HOH D 5 705 71 HOH HOH . 
X 7 HOH D 6 706 252 HOH HOH . 
X 7 HOH D 7 707 24 HOH HOH . 
X 7 HOH D 8 708 244 HOH HOH . 
X 7 HOH D 9 709 269 HOH HOH . 
X 7 HOH D 10 710 9 HOH HOH . 
X 7 HOH D 11 711 26 HOH HOH . 
X 7 HOH D 12 712 231 HOH HOH . 
X 7 HOH D 13 713 233 HOH HOH . 
X 7 HOH D 14 714 236 HOH HOH . 
X 7 HOH D 15 715 129 HOH HOH . 
X 7 HOH D 16 716 235 HOH HOH . 
Y 7 HOH C 1 701 260 HOH HOH . 
Y 7 HOH C 2 702 60 HOH HOH . 
Y 7 HOH C 3 703 246 HOH HOH . 
Y 7 HOH C 4 704 154 HOH HOH . 
Y 7 HOH C 5 705 97 HOH HOH . 
Z 7 HOH B 1 701 259 HOH HOH . 
Z 7 HOH B 2 702 255 HOH HOH . 
Z 7 HOH B 3 703 85 HOH HOH . 
Z 7 HOH B 4 704 27 HOH HOH . 
Z 7 HOH B 5 705 238 HOH HOH . 
Z 7 HOH B 6 706 90 HOH HOH . 
Z 7 HOH B 7 707 106 HOH HOH . 
Z 7 HOH B 8 708 256 HOH HOH . 
AA 7 HOH A 1 701 141 HOH HOH . 
AA 7 HOH A 2 702 257 HOH HOH . 
AA 7 HOH A 3 703 242 HOH HOH . 
AA 7 HOH A 4 704 258 HOH HOH . 
AA 7 HOH A 5 705 29 HOH HOH . 
AA 7 HOH A 6 706 275 HOH HOH . 
AA 7 HOH A 7 707 253 HOH HOH . 
AA 7 HOH A 8 708 274 HOH HOH . 
AA 7 HOH A 9 709 230 HOH HOH . 
AA 7 HOH A 10 710 270 HOH HOH . 
AA 7 HOH A 11 711 237 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . S 3 -75.877 6.949 -41.943 1 54.54 ? PA NAP 602 A 1 
HETATM 2 O O1A NAP . . . S 3 -76.341 8.298 -41.464 1 51.97 ? O1A NAP 602 A 1 
HETATM 3 O O2A NAP . . . S 3 -74.979 6.054 -41.117 1 51.81 ? O2A NAP 602 A 1 
HETATM 4 O O5B NAP . . . S 3 -75.127 7.198 -43.339 1 63.45 ? O5B NAP 602 A 1 
HETATM 5 C C5B NAP . . . S 3 -75.486 8.329 -44.122 1 69.1 ? C5B NAP 602 A 1 
HETATM 6 C C4B NAP . . . S 3 -74.336 8.719 -45.033 1 71.43 ? C4B NAP 602 A 1 
HETATM 7 O O4B NAP . . . S 3 -74.873 9.351 -46.179 1 68.91 ? O4B NAP 602 A 1 
HETATM 8 C C3B NAP . . . S 3 -73.377 9.754 -44.467 1 76.38 ? C3B NAP 602 A 1 
HETATM 9 O O3B NAP . . . S 3 -72.378 9.173 -43.63 1 84.18 ? O3B NAP 602 A 1 
HETATM 10 C C2B NAP . . . S 3 -72.764 10.338 -45.706 1 78.04 ? C2B NAP 602 A 1 
HETATM 11 O O2B NAP . . . S 3 -71.625 9.538 -46.074 1 91.68 ? O2B NAP 602 A 1 
HETATM 12 C C1B NAP . . . S 3 -73.878 10.194 -46.734 1 73.37 ? C1B NAP 602 A 1 
HETATM 13 N N9A NAP . . . S 3 -74.454 11.498 -47.171 1 70.56 ? N9A NAP 602 A 1 
HETATM 14 C C8A NAP . . . S 3 -75.27 12.341 -46.516 1 66.24 ? C8A NAP 602 A 1 
HETATM 15 N N7A NAP . . . S 3 -75.547 13.416 -47.299 1 67.16 ? N7A NAP 602 A 1 
HETATM 16 C C5A NAP . . . S 3 -74.898 13.267 -48.477 1 71.61 ? C5A NAP 602 A 1 
HETATM 17 C C6A NAP . . . S 3 -74.721 13.999 -49.767 1 73.96 ? C6A NAP 602 A 1 
HETATM 18 N N6A NAP . . . S 3 -75.318 15.188 -50.021 1 75.2 ? N6A NAP 602 A 1 
HETATM 19 N N1A NAP . . . S 3 -73.937 13.442 -50.724 1 73.72 ? N1A NAP 602 A 1 
HETATM 20 C C2A NAP . . . S 3 -73.309 12.259 -50.564 1 70.3 ? C2A NAP 602 A 1 
HETATM 21 N N3A NAP . . . S 3 -73.414 11.558 -49.433 1 69.66 ? N3A NAP 602 A 1 
HETATM 22 C C4A NAP . . . S 3 -74.18 11.994 -48.382 1 72.77 ? C4A NAP 602 A 1 
HETATM 23 O O3 NAP . . . S 3 -77.179 6.129 -42.42 1 52.99 ? O3 NAP 602 A 1 
HETATM 24 P PN NAP . . . S 3 -77.123 4.576 -42.861 1 53.09 ? PN NAP 602 A 1 
HETATM 25 O O1N NAP . . . S 3 -75.692 4.128 -43.063 1 54.04 ? O1N NAP 602 A 1 
HETATM 26 O O2N NAP . . . S 3 -78.127 4.402 -43.995 1 48.85 ? O2N NAP 602 A 1 
HETATM 27 O O5D NAP . . . S 3 -77.61 3.834 -41.506 1 54.68 ? O5D NAP 602 A 1 
HETATM 28 C C5D NAP . . . S 3 -77.833 4.525 -40.264 1 56.92 ? C5D NAP 602 A 1 
HETATM 29 C C4D NAP . . . S 3 -77.455 3.707 -39.027 1 57.87 ? C4D NAP 602 A 1 
HETATM 30 O O4D NAP . . . S 3 -77.977 2.388 -39.16 1 59.52 ? O4D NAP 602 A 1 
HETATM 31 C C3D NAP . . . S 3 -75.96 3.537 -38.78 1 59.29 ? C3D NAP 602 A 1 
HETATM 32 O O3D NAP . . . S 3 -75.436 4.52 -37.887 1 59.04 ? O3D NAP 602 A 1 
HETATM 33 C C2D NAP . . . S 3 -75.853 2.173 -38.147 1 59.97 ? C2D NAP 602 A 1 
HETATM 34 O O2D NAP . . . S 3 -75.92 2.287 -36.718 1 62.35 ? O2D NAP 602 A 1 
HETATM 35 C C1D NAP . . . S 3 -77.079 1.409 -38.623 1 60.75 ? C1D NAP 602 A 1 
HETATM 36 N N1N NAP . . . S 3 -76.768 0.355 -39.606 1 61.35 ? N1N NAP 602 A 1 
HETATM 37 C C2N NAP . . . S 3 -76.061 -0.714 -39.216 1 60.79 ? C2N NAP 602 A 1 
HETATM 38 C C3N NAP . . . S 3 -75.767 -1.737 -40.107 1 63.45 ? C3N NAP 602 A 1 
HETATM 39 C C7N NAP . . . S 3 -74.962 -2.927 -39.741 1 68.31 ? C7N NAP 602 A 1 
HETATM 40 O O7N NAP . . . S 3 -73.837 -2.98 -40.24 1 80.4 ? O7N NAP 602 A 1 
HETATM 41 N N7N NAP . . . S 3 -75.484 -3.863 -38.942 1 63.41 ? N7N NAP 602 A 1 
HETATM 42 C C4N NAP . . . S 3 -76.183 -1.662 -41.418 1 64.44 ? C4N NAP 602 A 1 
HETATM 43 C C5N NAP . . . S 3 -76.917 -0.556 -41.811 1 65.51 ? C5N NAP 602 A 1 
HETATM 44 C C6N NAP . . . S 3 -77.205 0.444 -40.877 1 64.94 ? C6N NAP 602 A 1 
HETATM 45 P P2B NAP . . . S 3 -70.305 10.072 -46.865 1 107.98 ? P2B NAP 602 A 1 
HETATM 46 O O1X NAP . . . S 3 -69.965 11.371 -46.171 1 117.32 ? O1X NAP 602 A 1 
HETATM 47 O O2X NAP . . . S 3 -69.282 8.978 -46.634 1 106.97 ? O2X NAP 602 A 1 
HETATM 48 O O3X NAP . . . S 3 -70.71 10.246 -48.32 1 107.24 ? O3X NAP 602 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           48 
#