data_7AM6 # _model_server_result.job_id 2mAqXIqOtovU86is6WavcQ _model_server_result.datetime_utc '2024-11-12 20:50:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7am6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":301}' # _entry.id 7AM6 # _exptl.entry_id 7AM6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D(-)-TARTARIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AM6 _cell.length_a 105.44 _cell.length_b 105.44 _cell.length_c 192.08 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AM6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,O 1 1 B,F,G,H,I,J,K,P 2 1 C,L,M,N,Q 3 1 D 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 197 A CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf2 B SG CYS 3 B CYS 3 1_555 B SG CYS 197 B CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 C SG CYS 3 C CYS 3 1_555 C SG CYS 197 C CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 A C THR 211 A THR 220 1_555 A N CSO 212 A CSO 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale2 A C CSO 212 A CSO 221 1_555 A N PRO 213 A PRO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? covale ? covale3 B SG CYS 212 B CYS 221 1_555 F O11 TAR . B TAR 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.645 ? covale ? covale4 B SG CYS 212 B CYS 221 1_555 F C1 TAR . B TAR 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.694 ? covale ? covale5 C C THR 211 C THR 220 1_555 C N CSO 212 C CSO 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale6 C C CSO 212 C CSO 221 1_555 C N PRO 213 C PRO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TAR _chem_comp.mon_nstd_flag . _chem_comp.name 'D(-)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TAR doub 317 n n O11 C1 TAR sing 318 n n O11 HO1 TAR sing 319 n n C1 C2 TAR sing 320 n n C2 O2 TAR sing 321 n n C2 C3 TAR sing 322 n n C2 H2 TAR sing 323 n n O2 HO2 TAR sing 324 n n C3 O3 TAR sing 325 n n C3 C4 TAR sing 326 n n C3 H3 TAR sing 327 n n O3 HO3 TAR sing 328 n n C4 O4 TAR doub 329 n n C4 O41 TAR sing 330 n n O41 HO4 TAR sing 331 n n # _atom_sites.entry_id 7AM6 _atom_sites.fract_transf_matrix[1][1] 0.009484 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009484 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 GOL A 1 301 310 GOL GOL . F 5 TAR B 1 301 301 TAR TAR . G 4 GOL B 1 302 310 GOL GOL . H 4 GOL B 1 303 311 GOL GOL . I 4 GOL B 1 304 312 GOL GOL . J 4 GOL B 1 305 313 GOL GOL . K 4 GOL B 1 306 314 GOL GOL . L 5 TAR C 1 301 301 TAR TAR . M 4 GOL C 1 302 311 GOL GOL . N 4 GOL C 1 303 312 GOL GOL . O 6 HOH A 1 401 35 HOH HOH . O 6 HOH A 2 402 42 HOH HOH . O 6 HOH A 3 403 36 HOH HOH . O 6 HOH A 4 404 34 HOH HOH . O 6 HOH A 5 405 37 HOH HOH . O 6 HOH A 6 406 24 HOH HOH . O 6 HOH A 7 407 14 HOH HOH . O 6 HOH A 8 408 13 HOH HOH . O 6 HOH A 9 409 20 HOH HOH . O 6 HOH A 10 410 45 HOH HOH . O 6 HOH A 11 411 29 HOH HOH . O 6 HOH A 12 412 17 HOH HOH . O 6 HOH A 13 413 16 HOH HOH . O 6 HOH A 14 414 44 HOH HOH . O 6 HOH A 15 415 28 HOH HOH . P 6 HOH B 1 401 41 HOH HOH . P 6 HOH B 2 402 1 HOH HOH . P 6 HOH B 3 403 40 HOH HOH . P 6 HOH B 4 404 3 HOH HOH . P 6 HOH B 5 405 11 HOH HOH . P 6 HOH B 6 406 25 HOH HOH . P 6 HOH B 7 407 10 HOH HOH . P 6 HOH B 8 408 5 HOH HOH . P 6 HOH B 9 409 39 HOH HOH . P 6 HOH B 10 410 27 HOH HOH . P 6 HOH B 11 411 43 HOH HOH . P 6 HOH B 12 412 15 HOH HOH . P 6 HOH B 13 413 21 HOH HOH . P 6 HOH B 14 414 31 HOH HOH . P 6 HOH B 15 415 6 HOH HOH . P 6 HOH B 16 416 8 HOH HOH . P 6 HOH B 17 417 22 HOH HOH . P 6 HOH B 18 418 7 HOH HOH . P 6 HOH B 19 419 23 HOH HOH . P 6 HOH B 20 420 9 HOH HOH . P 6 HOH B 21 421 26 HOH HOH . Q 6 HOH C 1 401 19 HOH HOH . Q 6 HOH C 2 402 33 HOH HOH . Q 6 HOH C 3 403 38 HOH HOH . Q 6 HOH C 4 404 4 HOH HOH . Q 6 HOH C 5 405 2 HOH HOH . Q 6 HOH C 6 406 12 HOH HOH . Q 6 HOH C 7 407 30 HOH HOH . Q 6 HOH C 8 408 32 HOH HOH . Q 6 HOH C 9 409 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TAR . . . L 5 -34.473 -16.823 6.688 1 55.1 ? O1 TAR 301 C 1 HETATM 2 O O11 TAR . . . L 5 -33.465 -15.878 8.403 1 55.53 ? O11 TAR 301 C 1 HETATM 3 C C1 TAR . . . L 5 -34.204 -16.759 7.911 1 59 ? C1 TAR 301 C 1 HETATM 4 C C2 TAR . . . L 5 -34.783 -17.751 8.882 1 61.07 ? C2 TAR 301 C 1 HETATM 5 O O2 TAR . . . L 5 -35.729 -17.038 9.68 1 64.18 ? O2 TAR 301 C 1 HETATM 6 C C3 TAR . . . L 5 -35.429 -18.985 8.222 1 61.29 ? C3 TAR 301 C 1 HETATM 7 O O3 TAR . . . L 5 -36.843 -19.101 8.472 1 53.57 ? O3 TAR 301 C 1 HETATM 8 C C4 TAR . . . L 5 -34.715 -20.181 8.78 1 66.75 ? C4 TAR 301 C 1 HETATM 9 O O4 TAR . . . L 5 -33.523 -20.378 8.438 1 72.6 ? O4 TAR 301 C 1 HETATM 10 O O41 TAR . . . L 5 -35.329 -20.917 9.583 1 70.1 ? O41 TAR 301 C 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #