data_7AM6
#
_model_server_result.job_id            1lDNoMM2GQoUcSbayEjPfg 
_model_server_result.datetime_utc      '2024-11-12 20:55:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7am6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":306}' 
#
_entry.id    7AM6 
#
_exptl.entry_id    7AM6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7AM6 
_cell.length_a            105.44 
_cell.length_b            105.44 
_cell.length_c            192.08 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AM6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,O 1 1 
B,F,G,H,I,J,K,P 2 1 
C,L,M,N,Q 3 1 
D 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 M N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 197 A CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
disulf ? disulf2 B SG CYS 3 B CYS 3 1_555 B SG CYS 197 B CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf3 C SG CYS 3 C CYS 3 1_555 C SG CYS 197 C CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 A C THR 211 A THR 220 1_555 A N CSO 212 A CSO 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? 
covale ? covale2 A C CSO 212 A CSO 221 1_555 A N PRO 213 A PRO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? 
covale ? covale3 B SG CYS 212 B CYS 221 1_555 F O11 TAR . B TAR 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.645 ? 
covale ? covale4 B SG CYS 212 B CYS 221 1_555 F C1 TAR . B TAR 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.694 ? 
covale ? covale5 C C THR 211 C THR 220 1_555 C N CSO 212 C CSO 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale6 C C CSO 212 C CSO 221 1_555 C N PRO 213 C PRO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 143 n n 
C1 C2 GOL sing 144 n n 
C1 H11 GOL sing 145 n n 
C1 H12 GOL sing 146 n n 
O1 HO1 GOL sing 147 n n 
C2 O2 GOL sing 148 n n 
C2 C3 GOL sing 149 n n 
C2 H2 GOL sing 150 n n 
O2 HO2 GOL sing 151 n n 
C3 O3 GOL sing 152 n n 
C3 H31 GOL sing 153 n n 
C3 H32 GOL sing 154 n n 
O3 HO3 GOL sing 155 n n 
#
_atom_sites.entry_id                     7AM6 
_atom_sites.fract_transf_matrix[1][1]    0.009484 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009484 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005206 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 GOL A 1 301 310 GOL GOL . 
F 5 TAR B 1 301 301 TAR TAR . 
G 4 GOL B 1 302 310 GOL GOL . 
H 4 GOL B 1 303 311 GOL GOL . 
I 4 GOL B 1 304 312 GOL GOL . 
J 4 GOL B 1 305 313 GOL GOL . 
K 4 GOL B 1 306 314 GOL GOL . 
L 5 TAR C 1 301 301 TAR TAR . 
M 4 GOL C 1 302 311 GOL GOL . 
N 4 GOL C 1 303 312 GOL GOL . 
O 6 HOH A 1 401 35 HOH HOH . 
O 6 HOH A 2 402 42 HOH HOH . 
O 6 HOH A 3 403 36 HOH HOH . 
O 6 HOH A 4 404 34 HOH HOH . 
O 6 HOH A 5 405 37 HOH HOH . 
O 6 HOH A 6 406 24 HOH HOH . 
O 6 HOH A 7 407 14 HOH HOH . 
O 6 HOH A 8 408 13 HOH HOH . 
O 6 HOH A 9 409 20 HOH HOH . 
O 6 HOH A 10 410 45 HOH HOH . 
O 6 HOH A 11 411 29 HOH HOH . 
O 6 HOH A 12 412 17 HOH HOH . 
O 6 HOH A 13 413 16 HOH HOH . 
O 6 HOH A 14 414 44 HOH HOH . 
O 6 HOH A 15 415 28 HOH HOH . 
P 6 HOH B 1 401 41 HOH HOH . 
P 6 HOH B 2 402 1 HOH HOH . 
P 6 HOH B 3 403 40 HOH HOH . 
P 6 HOH B 4 404 3 HOH HOH . 
P 6 HOH B 5 405 11 HOH HOH . 
P 6 HOH B 6 406 25 HOH HOH . 
P 6 HOH B 7 407 10 HOH HOH . 
P 6 HOH B 8 408 5 HOH HOH . 
P 6 HOH B 9 409 39 HOH HOH . 
P 6 HOH B 10 410 27 HOH HOH . 
P 6 HOH B 11 411 43 HOH HOH . 
P 6 HOH B 12 412 15 HOH HOH . 
P 6 HOH B 13 413 21 HOH HOH . 
P 6 HOH B 14 414 31 HOH HOH . 
P 6 HOH B 15 415 6 HOH HOH . 
P 6 HOH B 16 416 8 HOH HOH . 
P 6 HOH B 17 417 22 HOH HOH . 
P 6 HOH B 18 418 7 HOH HOH . 
P 6 HOH B 19 419 23 HOH HOH . 
P 6 HOH B 20 420 9 HOH HOH . 
P 6 HOH B 21 421 26 HOH HOH . 
Q 6 HOH C 1 401 19 HOH HOH . 
Q 6 HOH C 2 402 33 HOH HOH . 
Q 6 HOH C 3 403 38 HOH HOH . 
Q 6 HOH C 4 404 4 HOH HOH . 
Q 6 HOH C 5 405 2 HOH HOH . 
Q 6 HOH C 6 406 12 HOH HOH . 
Q 6 HOH C 7 407 30 HOH HOH . 
Q 6 HOH C 8 408 32 HOH HOH . 
Q 6 HOH C 9 409 18 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 4 -59.938 5.783 31.275 1 59.3 ? C1 GOL 306 B 1 
HETATM 2 O O1 GOL . . . K 4 -58.521 5.916 31.226 1 57.49 ? O1 GOL 306 B 1 
HETATM 3 C C2 GOL . . . K 4 -60.474 5.143 30.013 1 59.15 ? C2 GOL 306 B 1 
HETATM 4 O O2 GOL . . . K 4 -60.069 3.774 29.977 1 56.77 ? O2 GOL 306 B 1 
HETATM 5 C C3 GOL . . . K 4 -61.979 5.258 29.883 1 57.08 ? C3 GOL 306 B 1 
HETATM 6 O O3 GOL . . . K 4 -62.649 4.569 30.937 1 52.83 ? O3 GOL 306 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#