data_7ANB # _model_server_result.job_id MgBGBS3nVqI3d7XqGodUCg _model_server_result.datetime_utc '2024-11-24 19:12:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7anb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 7ANB # _exptl.entry_id 7ANB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ANB _cell.length_a 81.268 _cell.length_b 81.268 _cell.length_c 383.735 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ANB _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 38 AAA ASP 35 1_555 F CA CA . AAA CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc2 A OD1 ASP 39 AAA ASP 36 1_555 F CA CA . AAA CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc3 A OD1 ASP 331 AAA ASP 328 1_555 F CA CA . AAA CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc4 A OD2 ASP 331 AAA ASP 328 1_555 F CA CA . AAA CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc5 A OD1 ASN 332 AAA ASN 329 1_555 F CA CA . AAA CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc6 C O1 SO4 . AAA SO4 601 1_555 F CA CA . AAA CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc7 B OD1 ASP 38 BBB ASP 35 1_555 I CA CA . BBB CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc8 B OD1 ASP 39 BBB ASP 36 1_555 I CA CA . BBB CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc9 B OD1 ASP 331 BBB ASP 328 1_555 I CA CA . BBB CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc10 B OD2 ASP 331 BBB ASP 328 1_555 I CA CA . BBB CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc11 B OD1 ASN 332 BBB ASN 329 1_555 I CA CA . BBB CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc12 G O4 SO4 . BBB SO4 601 1_555 I CA CA . BBB CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7ANB _atom_sites.fract_transf_matrix[1][1] 0.012305 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 AAA 1 601 601 SO4 SO4 . D 3 EDO AAA 1 602 701 EDO EDO . E 3 EDO AAA 1 603 801 EDO EDO . F 4 CA AAA 1 604 1 CA CA . G 2 SO4 BBB 1 601 601 SO4 SO4 . H 3 EDO BBB 1 602 701 EDO EDO . I 4 CA BBB 1 603 2 CA CA . J 5 HOH AAA 1 701 24 HOH HOH . J 5 HOH AAA 2 702 6 HOH HOH . J 5 HOH AAA 3 703 11 HOH HOH . J 5 HOH AAA 4 704 29 HOH HOH . J 5 HOH AAA 5 705 20 HOH HOH . J 5 HOH AAA 6 706 7 HOH HOH . J 5 HOH AAA 7 707 3 HOH HOH . J 5 HOH AAA 8 708 28 HOH HOH . J 5 HOH AAA 9 709 9 HOH HOH . K 5 HOH BBB 1 701 19 HOH HOH . K 5 HOH BBB 2 702 14 HOH HOH . K 5 HOH BBB 3 703 16 HOH HOH . K 5 HOH BBB 4 704 1 HOH HOH . K 5 HOH BBB 5 705 13 HOH HOH . K 5 HOH BBB 6 706 10 HOH HOH . K 5 HOH BBB 7 707 22 HOH HOH . K 5 HOH BBB 8 708 21 HOH HOH . K 5 HOH BBB 9 709 12 HOH HOH . K 5 HOH BBB 10 710 17 HOH HOH . K 5 HOH BBB 11 711 5 HOH HOH . K 5 HOH BBB 12 712 2 HOH HOH . K 5 HOH BBB 13 713 26 HOH HOH . K 5 HOH BBB 14 714 25 HOH HOH . K 5 HOH BBB 15 715 23 HOH HOH . K 5 HOH BBB 16 716 4 HOH HOH . K 5 HOH BBB 17 717 18 HOH HOH . K 5 HOH BBB 18 718 27 HOH HOH . K 5 HOH BBB 19 719 8 HOH HOH . K 5 HOH BBB 20 720 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 7.192 -25.92 10.638 1 53.1 0 C1 EDO 602 AAA 1 HETATM 2 O O1 EDO . . . D 3 6.723 -24.962 11.567 1 53.71 0 O1 EDO 602 AAA 1 HETATM 3 C C2 EDO . . . D 3 6.603 -27.252 10.927 1 53.26 0 C2 EDO 602 AAA 1 HETATM 4 O O2 EDO . . . D 3 7.243 -27.955 11.974 1 53.16 0 O2 EDO 602 AAA 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 706 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #