data_7ANW # _model_server_result.job_id CqNQVBvBkpb0j67J37lpLw _model_server_result.datetime_utc '2024-11-21 21:40:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7anw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":801}' # _entry.id 7ANW # _exptl.entry_id 7ANW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ANW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ANW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 235 n n PA O2A NAD sing 236 n n PA O5B NAD sing 237 n n PA O3 NAD sing 238 n n O2A HOA2 NAD sing 239 n n O5B C5B NAD sing 240 n n C5B C4B NAD sing 241 n n C5B H51A NAD sing 242 n n C5B H52A NAD sing 243 n n C4B O4B NAD sing 244 n n C4B C3B NAD sing 245 n n C4B H4B NAD sing 246 n n O4B C1B NAD sing 247 n n C3B O3B NAD sing 248 n n C3B C2B NAD sing 249 n n C3B H3B NAD sing 250 n n O3B HO3A NAD sing 251 n n C2B O2B NAD sing 252 n n C2B C1B NAD sing 253 n n C2B H2B NAD sing 254 n n O2B HO2A NAD sing 255 n n C1B N9A NAD sing 256 n n C1B H1B NAD sing 257 n n N9A C8A NAD sing 258 n y N9A C4A NAD sing 259 n y C8A N7A NAD doub 260 n y C8A H8A NAD sing 261 n n N7A C5A NAD sing 262 n y C5A C6A NAD sing 263 n y C5A C4A NAD doub 264 n y C6A N6A NAD sing 265 n n C6A N1A NAD doub 266 n y N6A H61A NAD sing 267 n n N6A H62A NAD sing 268 n n N1A C2A NAD sing 269 n y C2A N3A NAD doub 270 n y C2A H2A NAD sing 271 n n N3A C4A NAD sing 272 n y O3 PN NAD sing 273 n n PN O1N NAD doub 274 n n PN O2N NAD sing 275 n n PN O5D NAD sing 276 n n O5D C5D NAD sing 277 n n C5D C4D NAD sing 278 n n C5D H51N NAD sing 279 n n C5D H52N NAD sing 280 n n C4D O4D NAD sing 281 n n C4D C3D NAD sing 282 n n C4D H4D NAD sing 283 n n O4D C1D NAD sing 284 n n C3D O3D NAD sing 285 n n C3D C2D NAD sing 286 n n C3D H3D NAD sing 287 n n O3D HO3N NAD sing 288 n n C2D O2D NAD sing 289 n n C2D C1D NAD sing 290 n n C2D H2D NAD sing 291 n n O2D HO2N NAD sing 292 n n C1D N1N NAD sing 293 n n C1D H1D NAD sing 294 n n N1N C2N NAD sing 295 n y N1N C6N NAD doub 296 n y C2N C3N NAD doub 297 n y C2N H2N NAD sing 298 n n C3N C7N NAD sing 299 n n C3N C4N NAD sing 300 n y C7N O7N NAD doub 301 n n C7N N7N NAD sing 302 n n N7N H71N NAD sing 303 n n N7N H72N NAD sing 304 n n C4N C5N NAD doub 305 n y C4N H4N NAD sing 306 n n C5N C6N NAD sing 307 n y C5N H5N NAD sing 308 n n C6N H6N NAD sing 309 n n # _atom_sites.entry_id 7ANW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 NAD A 1 801 801 NAD NAD . J 2 NAD B 1 801 801 NAD NAD . K 2 NAD C 1 801 801 NAD NAD . L 2 NAD D 1 801 801 NAD NAD . M 2 NAD E 1 801 801 NAD NAD . N 2 NAD F 1 801 801 NAD NAD . O 2 NAD G 1 801 801 NAD NAD . P 2 NAD H 1 801 801 NAD NAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . M 2 182.721 93.079 156.038 1 169.09 ? PA NAD 801 E 1 HETATM 2 O O1A NAD . . . M 2 182.727 94.206 155.056 1 169.42 ? O1A NAD 801 E 1 HETATM 3 O O2A NAD . . . M 2 182.865 93.386 157.493 1 184.73 ? O2A NAD 801 E 1 HETATM 4 O O5B NAD . . . M 2 181.405 92.187 155.799 1 203.99 ? O5B NAD 801 E 1 HETATM 5 C C5B NAD . . . M 2 180.142 92.605 156.365 1 226.38 ? C5B NAD 801 E 1 HETATM 6 C C4B NAD . . . M 2 179.904 91.857 157.651 1 234.97 ? C4B NAD 801 E 1 HETATM 7 O O4B NAD . . . M 2 178.891 92.537 158.432 1 243.64 ? O4B NAD 801 E 1 HETATM 8 C C3B NAD . . . M 2 179.378 90.423 157.528 1 255.54 ? C3B NAD 801 E 1 HETATM 9 O O3B NAD . . . M 2 180.424 89.498 157.263 1 247.24 ? O3B NAD 801 E 1 HETATM 10 C C2B NAD . . . M 2 178.776 90.212 158.921 1 289.75 ? C2B NAD 801 E 1 HETATM 11 O O2B NAD . . . M 2 179.7 89.746 159.884 1 301.11 ? O2B NAD 801 E 1 HETATM 12 C C1B NAD . . . M 2 178.212 91.598 159.241 1 301.58 ? C1B NAD 801 E 1 HETATM 13 N N9A NAD . . . M 2 178.331 91.977 160.65 1 332.89 ? N9A NAD 801 E 1 HETATM 14 C C8A NAD . . . M 2 177.403 91.708 161.628 1 359.66 ? C8A NAD 801 E 1 HETATM 15 N N7A NAD . . . M 2 177.75 92.147 162.812 1 366.87 ? N7A NAD 801 E 1 HETATM 16 C C5A NAD . . . M 2 178.989 92.742 162.61 1 353.94 ? C5A NAD 801 E 1 HETATM 17 C C6A NAD . . . M 2 179.884 93.394 163.486 1 342.96 ? C6A NAD 801 E 1 HETATM 18 N N6A NAD . . . M 2 179.656 93.559 164.787 1 345.81 ? N6A NAD 801 E 1 HETATM 19 N N1A NAD . . . M 2 181.041 93.876 162.963 1 311.05 ? N1A NAD 801 E 1 HETATM 20 C C2A NAD . . . M 2 181.27 93.71 161.653 1 276.61 ? C2A NAD 801 E 1 HETATM 21 N N3A NAD . . . M 2 180.506 93.113 160.739 1 286.04 ? N3A NAD 801 E 1 HETATM 22 C C4A NAD . . . M 2 179.362 92.645 161.279 1 331.43 ? C4A NAD 801 E 1 HETATM 23 O O3 NAD . . . M 2 183.862 92.03 155.637 1 157.46 ? O3 NAD 801 E 1 HETATM 24 P PN NAD . . . M 2 184.251 90.617 156.283 1 150.7 ? PN NAD 801 E 1 HETATM 25 O O1N NAD . . . M 2 184.763 90.875 157.667 1 165.01 ? O1N NAD 801 E 1 HETATM 26 O O2N NAD . . . M 2 183.13 89.644 156.128 1 168.16 ? O2N NAD 801 E 1 HETATM 27 O O5D NAD . . . M 2 185.455 90.166 155.334 1 137.64 ? O5D NAD 801 E 1 HETATM 28 C C5D NAD . . . M 2 186.606 89.641 156.037 1 159.53 ? C5D NAD 801 E 1 HETATM 29 C C4D NAD . . . M 2 187.009 88.331 155.417 1 142.61 ? C4D NAD 801 E 1 HETATM 30 O O4D NAD . . . M 2 186.62 87.267 156.308 1 137.68 ? O4D NAD 801 E 1 HETATM 31 C C3D NAD . . . M 2 186.381 88.034 154.052 1 106.35 ? C3D NAD 801 E 1 HETATM 32 O O3D NAD . . . M 2 187.358 88.272 153.051 1 98.19 ? O3D NAD 801 E 1 HETATM 33 C C2D NAD . . . M 2 186.006 86.551 154.156 1 131.25 ? C2D NAD 801 E 1 HETATM 34 O O2D NAD . . . M 2 186.658 85.758 153.176 1 127.08 ? O2D NAD 801 E 1 HETATM 35 C C1D NAD . . . M 2 186.377 86.094 155.569 1 143.05 ? C1D NAD 801 E 1 HETATM 36 N N1N NAD . . . M 2 185.275 85.385 156.265 1 162.54 ? N1N NAD 801 E 1 HETATM 37 C C2N NAD . . . M 2 185.271 84.012 156.318 1 185.94 ? C2N NAD 801 E 1 HETATM 38 C C3N NAD . . . M 2 184.588 83.409 157.374 1 229.05 ? C3N NAD 801 E 1 HETATM 39 C C7N NAD . . . M 2 184.702 81.913 157.55 1 251.82 ? C7N NAD 801 E 1 HETATM 40 O O7N NAD . . . M 2 185.368 81.261 156.747 1 234.74 ? O7N NAD 801 E 1 HETATM 41 N N7N NAD . . . M 2 184.072 81.359 158.581 1 299.06 ? N7N NAD 801 E 1 HETATM 42 C C4N NAD . . . M 2 183.82 84.212 158.236 1 238.47 ? C4N NAD 801 E 1 HETATM 43 C C5N NAD . . . M 2 183.565 85.531 157.913 1 206.77 ? C5N NAD 801 E 1 HETATM 44 C C6N NAD . . . M 2 184.306 86.107 156.908 1 173.61 ? C6N NAD 801 E 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 44 #