data_7AO9 # _model_server_result.job_id JUG1ASmFrly1pXIBy4z3KQ _model_server_result.datetime_utc '2024-11-22 22:24:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ao9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 7AO9 # _exptl.entry_id 7AO9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AO9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AO9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O ASP 174 E ASP 174 1_555 H K K . E K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.002 ? metalc ? metalc2 C OD1 ASP 174 E ASP 174 1_555 H K K . E K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc3 C OD1 ASP 176 E ASP 176 1_555 G ZN ZN . E ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc4 C O ASP 176 E ASP 176 1_555 H K K . E K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc5 C ND1 HIS 178 E HIS 178 1_555 G ZN ZN . E ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc6 C O HIS 178 E HIS 178 1_555 H K K . E K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.176 ? metalc ? metalc7 C O PHE 187 E PHE 187 1_555 I K K . E K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc8 C O THR 190 E THR 190 1_555 I K K . E K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.265 ? metalc ? metalc9 C O VAL 193 E VAL 193 1_555 I K K . E K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.152 ? metalc ? metalc10 C OG SER 197 E SER 197 1_555 H K K . E K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc11 C O PHE 198 E PHE 198 1_555 H K K . E K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.067 ? metalc ? metalc12 C OD2 ASP 264 E ASP 264 1_555 G ZN ZN . E ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc13 E O ASP 174 B ASP 174 1_555 L K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.001 ? metalc ? metalc14 E OD1 ASP 174 B ASP 174 1_555 L K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc15 E OD1 ASP 176 B ASP 176 1_555 K ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc16 E O ASP 176 B ASP 176 1_555 L K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc17 E ND1 HIS 178 B HIS 178 1_555 K ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc18 E O HIS 178 B HIS 178 1_555 L K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc19 E O PHE 187 B PHE 187 1_555 M K K . B K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc20 E O THR 190 B THR 190 1_555 M K K . B K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.263 ? metalc ? metalc21 E O VAL 193 B VAL 193 1_555 M K K . B K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.152 ? metalc ? metalc22 E OG SER 197 B SER 197 1_555 L K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? metalc ? metalc23 E O PHE 198 B PHE 198 1_555 L K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.067 ? metalc ? metalc24 E OD2 ASP 264 B ASP 264 1_555 K ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 150 n n C1 C6 IHP sing 151 n n C1 O11 IHP sing 152 n n C1 H1 IHP sing 153 n n C2 C3 IHP sing 154 n n C2 O12 IHP sing 155 n n C2 H2 IHP sing 156 n n C3 C4 IHP sing 157 n n C3 O13 IHP sing 158 n n C3 H3 IHP sing 159 n n C4 C5 IHP sing 160 n n C4 O14 IHP sing 161 n n C4 H4 IHP sing 162 n n C5 C6 IHP sing 163 n n C5 O15 IHP sing 164 n n C5 H5 IHP sing 165 n n C6 O16 IHP sing 166 n n C6 H6 IHP sing 167 n n O11 P1 IHP sing 168 n n P1 O21 IHP doub 169 n n P1 O31 IHP sing 170 n n P1 O41 IHP sing 171 n n O31 H31 IHP sing 172 n n O41 H41 IHP sing 173 n n O12 P2 IHP sing 174 n n P2 O22 IHP doub 175 n n P2 O32 IHP sing 176 n n P2 O42 IHP sing 177 n n O32 H32 IHP sing 178 n n O42 H42 IHP sing 179 n n O13 P3 IHP sing 180 n n P3 O23 IHP doub 181 n n P3 O33 IHP sing 182 n n P3 O43 IHP sing 183 n n O33 H33 IHP sing 184 n n O43 H43 IHP sing 185 n n O14 P4 IHP sing 186 n n P4 O24 IHP doub 187 n n P4 O34 IHP sing 188 n n P4 O44 IHP sing 189 n n O34 H34 IHP sing 190 n n O44 H44 IHP sing 191 n n O15 P5 IHP sing 192 n n P5 O25 IHP doub 193 n n P5 O35 IHP sing 194 n n P5 O45 IHP sing 195 n n O35 H35 IHP sing 196 n n O45 H45 IHP sing 197 n n O16 P6 IHP sing 198 n n P6 O26 IHP doub 199 n n P6 O36 IHP sing 200 n n P6 O46 IHP sing 201 n n O36 H36 IHP sing 202 n n O46 H46 IHP sing 203 n n # _atom_sites.entry_id 7AO9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 IHP D 1 801 504 IHP I6P . G 5 ZN E 1 501 501 ZN ZN . H 6 K E 1 502 502 K K . I 6 K E 1 503 503 K K . J 4 IHP A 1 801 504 IHP I6P . K 5 ZN B 1 501 501 ZN ZN . L 6 K B 1 502 502 K K . M 6 K B 1 503 503 K K . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . F 4 121.403 141.3 89.58 0.7 29.86 ? C1 IHP 801 D 1 HETATM 2 C C2 IHP . . . F 4 121.746 140.752 90.95 0.7 30.27 ? C2 IHP 801 D 1 HETATM 3 C C3 IHP . . . F 4 122.61 139.505 90.821 0.7 29.92 ? C3 IHP 801 D 1 HETATM 4 C C4 IHP . . . F 4 123.904 139.8 90.056 0.7 28.79 ? C4 IHP 801 D 1 HETATM 5 C C5 IHP . . . F 4 123.612 140.467 88.709 0.7 29.01 ? C5 IHP 801 D 1 HETATM 6 C C6 IHP . . . F 4 122.685 141.682 88.832 0.7 29.42 ? C6 IHP 801 D 1 HETATM 7 O O11 IHP . . . F 4 120.496 142.392 89.754 0.7 29.66 ? O11 IHP 801 D 1 HETATM 8 P P1 IHP . . . F 4 118.988 142.265 89.192 0.7 28.68 ? P1 IHP 801 D 1 HETATM 9 O O21 IHP . . . F 4 118.465 140.941 89.697 0.7 27.91 ? O21 IHP 801 D 1 HETATM 10 O O31 IHP . . . F 4 119.19 142.275 87.694 0.7 28.25 ? O31 IHP 801 D 1 HETATM 11 O O41 IHP . . . F 4 118.319 143.49 89.782 0.7 29.07 -1 O41 IHP 801 D 1 HETATM 12 O O12 IHP . . . F 4 120.538 140.427 91.635 0.7 31.64 ? O12 IHP 801 D 1 HETATM 13 P P2 IHP . . . F 4 120.223 141.166 93.028 0.7 34.18 ? P2 IHP 801 D 1 HETATM 14 O O22 IHP . . . F 4 119.148 140.321 93.694 0.7 34 ? O22 IHP 801 D 1 HETATM 15 O O32 IHP . . . F 4 121.59 141.137 93.693 0.7 34.15 -1 O32 IHP 801 D 1 HETATM 16 O O42 IHP . . . F 4 119.759 142.555 92.621 0.7 33.23 ? O42 IHP 801 D 1 HETATM 17 O O13 IHP . . . F 4 121.853 138.43 90.225 0.7 30.89 ? O13 IHP 801 D 1 HETATM 18 P P3 IHP . . . F 4 121.565 137.045 91.033 0.7 31.73 ? P3 IHP 801 D 1 HETATM 19 O O23 IHP . . . F 4 121.006 137.551 92.349 0.7 31.33 ? O23 IHP 801 D 1 HETATM 20 O O33 IHP . . . F 4 120.557 136.231 90.209 0.7 30.65 -1 O33 IHP 801 D 1 HETATM 21 O O43 IHP . . . F 4 122.952 136.437 91.185 0.7 29.91 ? O43 IHP 801 D 1 HETATM 22 O O14 IHP . . . F 4 124.647 138.576 89.894 0.7 26.85 ? O14 IHP 801 D 1 HETATM 23 P P4 IHP . . . F 4 126.173 138.404 90.392 0.7 25.16 ? P4 IHP 801 D 1 HETATM 24 O O24 IHP . . . F 4 126.925 139.295 89.436 0.7 25.3 ? O24 IHP 801 D 1 HETATM 25 O O34 IHP . . . F 4 126.118 138.902 91.811 0.7 25.48 -1 O34 IHP 801 D 1 HETATM 26 O O44 IHP . . . F 4 126.548 136.947 90.285 0.7 24 ? O44 IHP 801 D 1 HETATM 27 O O15 IHP . . . F 4 124.849 140.854 88.114 0.7 29.45 ? O15 IHP 801 D 1 HETATM 28 P P5 IHP . . . F 4 125.253 140.307 86.644 0.7 30.43 ? P5 IHP 801 D 1 HETATM 29 O O25 IHP . . . F 4 124.224 140.949 85.728 0.7 29.9 ? O25 IHP 801 D 1 HETATM 30 O O35 IHP . . . F 4 126.69 140.773 86.501 0.7 28.79 -1 O35 IHP 801 D 1 HETATM 31 O O45 IHP . . . F 4 125.104 138.805 86.711 0.7 30.59 ? O45 IHP 801 D 1 HETATM 32 O O16 IHP . . . F 4 122.36 142.145 87.518 0.7 29.37 ? O16 IHP 801 D 1 HETATM 33 P P6 IHP . . . F 4 122.826 143.591 86.971 0.7 29.55 ? P6 IHP 801 D 1 HETATM 34 O O26 IHP . . . F 4 122.238 143.648 85.576 0.7 28.88 ? O26 IHP 801 D 1 HETATM 35 O O36 IHP . . . F 4 122.237 144.575 87.97 0.7 29.48 -1 O36 IHP 801 D 1 HETATM 36 O O46 IHP . . . F 4 124.339 143.518 86.982 0.7 29.3 ? O46 IHP 801 D 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #