data_7AOS # _model_server_result.job_id P1BoD4WWEzzOtz-imwC-Ig _model_server_result.datetime_utc '2024-10-25 06:27:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aos # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 7AOS # _exptl.entry_id 7AOS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AOS _cell.length_a 108.283 _cell.length_b 108.283 _cell.length_c 99.786 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AOS _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 182 n n C1 C2 GOL sing 183 n n C1 H11 GOL sing 184 n n C1 H12 GOL sing 185 n n O1 HO1 GOL sing 186 n n C2 O2 GOL sing 187 n n C2 C3 GOL sing 188 n n C2 H2 GOL sing 189 n n O2 HO2 GOL sing 190 n n C3 O3 GOL sing 191 n n C3 H31 GOL sing 192 n n C3 H32 GOL sing 193 n n O3 HO3 GOL sing 194 n n # _atom_sites.entry_id 7AOS _atom_sites.fract_transf_matrix[1][1] 0.009235 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009235 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010021 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 LG2 A 1 501 1 LG2 LG2 . F 5 GOL A 1 502 1 GOL GOL . G 6 EQN B 1 501 1 EQN EQN . H 7 HOH A 1 601 13 HOH HOH . H 7 HOH A 2 602 3 HOH HOH . H 7 HOH A 3 603 4 HOH HOH . H 7 HOH A 4 604 6 HOH HOH . H 7 HOH A 5 605 2 HOH HOH . H 7 HOH A 6 606 12 HOH HOH . H 7 HOH A 7 607 10 HOH HOH . H 7 HOH A 8 608 11 HOH HOH . I 7 HOH B 1 601 7 HOH HOH . I 7 HOH B 2 602 5 HOH HOH . I 7 HOH B 3 603 9 HOH HOH . I 7 HOH B 4 604 1 HOH HOH . J 7 HOH C 1 801 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 5 23.584 0.194 -16.543 1 103.67 ? C1 GOL 502 A 1 HETATM 2 O O1 GOL . . . F 5 24.068 -0.054 -17.823 1 102.65 ? O1 GOL 502 A 1 HETATM 3 C C2 GOL . . . F 5 22.298 1.03 -16.711 1 106.13 ? C2 GOL 502 A 1 HETATM 4 O O2 GOL . . . F 5 21.747 1.38 -15.488 1 107.7 ? O2 GOL 502 A 1 HETATM 5 C C3 GOL . . . F 5 22.732 2.261 -17.546 1 100.78 ? C3 GOL 502 A 1 HETATM 6 O O3 GOL . . . F 5 22.785 1.85 -18.876 1 99.77 ? O3 GOL 502 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 395 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #