data_7AQB # _model_server_result.job_id TxIUAGWSacjOVLzD188B2Q _model_server_result.datetime_utc '2025-02-05 12:02:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aqb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 7AQB # _exptl.entry_id 7AQB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AQB _cell.length_a 83.317 _cell.length_b 83.317 _cell.length_c 181.066 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AQB _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 150 A ASN 157 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc2 A OD2 ASP 164 A ASP 171 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7AQB _atom_sites.fract_transf_matrix[1][1] 0.012002 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012002 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005523 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 1 MG MG . D 3 EDO B 1 401 401 EDO EDO . E 4 HOH A 1 501 46 HOH HOH . E 4 HOH A 2 502 63 HOH HOH . E 4 HOH A 3 503 62 HOH HOH . E 4 HOH A 4 504 58 HOH HOH . E 4 HOH A 5 505 35 HOH HOH . E 4 HOH A 6 506 22 HOH HOH . E 4 HOH A 7 507 37 HOH HOH . E 4 HOH A 8 508 10 HOH HOH . E 4 HOH A 9 509 20 HOH HOH . E 4 HOH A 10 510 27 HOH HOH . E 4 HOH A 11 511 40 HOH HOH . E 4 HOH A 12 512 33 HOH HOH . E 4 HOH A 13 513 75 HOH HOH . E 4 HOH A 14 514 44 HOH HOH . E 4 HOH A 15 515 26 HOH HOH . E 4 HOH A 16 516 52 HOH HOH . E 4 HOH A 17 517 25 HOH HOH . E 4 HOH A 18 518 48 HOH HOH . E 4 HOH A 19 519 61 HOH HOH . E 4 HOH A 20 520 66 HOH HOH . E 4 HOH A 21 521 7 HOH HOH . E 4 HOH A 22 522 53 HOH HOH . E 4 HOH A 23 523 15 HOH HOH . E 4 HOH A 24 524 28 HOH HOH . E 4 HOH A 25 525 17 HOH HOH . E 4 HOH A 26 526 24 HOH HOH . E 4 HOH A 27 527 32 HOH HOH . E 4 HOH A 28 528 13 HOH HOH . E 4 HOH A 29 529 12 HOH HOH . E 4 HOH A 30 530 5 HOH HOH . E 4 HOH A 31 531 54 HOH HOH . E 4 HOH A 32 532 67 HOH HOH . E 4 HOH A 33 533 71 HOH HOH . E 4 HOH A 34 534 42 HOH HOH . E 4 HOH A 35 535 3 HOH HOH . E 4 HOH A 36 536 73 HOH HOH . E 4 HOH A 37 537 57 HOH HOH . E 4 HOH A 38 538 21 HOH HOH . F 4 HOH B 1 501 51 HOH HOH . F 4 HOH B 2 502 76 HOH HOH . F 4 HOH B 3 503 74 HOH HOH . F 4 HOH B 4 504 30 HOH HOH . F 4 HOH B 5 505 41 HOH HOH . F 4 HOH B 6 506 19 HOH HOH . F 4 HOH B 7 507 16 HOH HOH . F 4 HOH B 8 508 68 HOH HOH . F 4 HOH B 9 509 50 HOH HOH . F 4 HOH B 10 510 65 HOH HOH . F 4 HOH B 11 511 23 HOH HOH . F 4 HOH B 12 512 55 HOH HOH . F 4 HOH B 13 513 59 HOH HOH . F 4 HOH B 14 514 14 HOH HOH . F 4 HOH B 15 515 56 HOH HOH . F 4 HOH B 16 516 49 HOH HOH . F 4 HOH B 17 517 38 HOH HOH . F 4 HOH B 18 518 29 HOH HOH . F 4 HOH B 19 519 11 HOH HOH . F 4 HOH B 20 520 78 HOH HOH . F 4 HOH B 21 521 36 HOH HOH . F 4 HOH B 22 522 43 HOH HOH . F 4 HOH B 23 523 34 HOH HOH . F 4 HOH B 24 524 8 HOH HOH . F 4 HOH B 25 525 1 HOH HOH . F 4 HOH B 26 526 79 HOH HOH . F 4 HOH B 27 527 4 HOH HOH . F 4 HOH B 28 528 47 HOH HOH . F 4 HOH B 29 529 18 HOH HOH . F 4 HOH B 30 530 9 HOH HOH . F 4 HOH B 31 531 72 HOH HOH . F 4 HOH B 32 532 2 HOH HOH . F 4 HOH B 33 533 69 HOH HOH . F 4 HOH B 34 534 31 HOH HOH . F 4 HOH B 35 535 6 HOH HOH . F 4 HOH B 36 536 39 HOH HOH . F 4 HOH B 37 537 70 HOH HOH . F 4 HOH B 38 538 60 HOH HOH . F 4 HOH B 39 539 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 75.35 -1.963 42.661 1 61.01 ? C1 EDO 401 B 1 HETATM 2 O O1 EDO . . . D 3 74.919 -0.698 42.146 1 63.48 ? O1 EDO 401 B 1 HETATM 3 C C2 EDO . . . D 3 74.263 -3.009 42.642 1 59.48 ? C2 EDO 401 B 1 HETATM 4 O O2 EDO . . . D 3 74.617 -4.308 43.151 1 58.21 ? O2 EDO 401 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #