data_7AQQ
#
_model_server_result.job_id            6tRiUO5UmCCaCAbeYzox8Q 
_model_server_result.datetime_utc      '2025-03-06 09:26:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7aqq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AA","auth_seq_id":201}' 
#
_entry.id    7AQQ 
#
_exptl.entry_id    7AQQ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              763.1 
_entity.id                          26 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7AQQ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AQQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    21-meric 
_pdbx_struct_assembly.oligomeric_count      21 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      26 
_struct_asym.id                             AA 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 G SG CYS 336 N CYS 336 1_555 G SG CYS 420 N CYS 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 N SG CYS 24 e CYS 24 1_555 N SG CYS 34 e CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc1 H NE2 HIS 83 O HIS 83 1_555 Z FE FE . O FE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc2 H SG CYS 91 O CYS 91 1_555 Z FE FE . O FE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc3 H SG CYS 95 O CYS 95 1_555 Z FE FE . O FE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc4 H SG CYS 135 O CYS 135 1_555 Z FE FE . O FE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc5 T NE2 HIS 135 y HIS 135 1_555 BA ZN ZN . y ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc6 BA ZN ZN . y ZN 301 1_555 U NE2 HIS 130 z HIS 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc7 BA ZN ZN . y ZN 301 1_555 U OH TYR 207 z TYR 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
#
_chem_comp.formula           'C42 H85 N O8 P 1' 
_chem_comp.formula_weight    763.1 
_chem_comp.id                PC7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PHOSPHATIDYLCHOLINE;1-PALMITOYL-2-STEAROYL-PC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C48 C47 PC7 sing 395 n n 
C48 H481 PC7 sing 396 n n 
C48 H482 PC7 sing 397 n n 
C48 H483 PC7 sing 398 n n 
C47 C46 PC7 sing 399 n n 
C47 H471 PC7 sing 400 n n 
C47 H472 PC7 sing 401 n n 
C46 C45 PC7 sing 402 n n 
C46 H461 PC7 sing 403 n n 
C46 H462 PC7 sing 404 n n 
C45 C44 PC7 sing 405 n n 
C45 H451 PC7 sing 406 n n 
C45 H452 PC7 sing 407 n n 
C44 C43 PC7 sing 408 n n 
C44 H441 PC7 sing 409 n n 
C44 H442 PC7 sing 410 n n 
C43 C42 PC7 sing 411 n n 
C43 H431 PC7 sing 412 n n 
C43 H432 PC7 sing 413 n n 
C42 C41 PC7 sing 414 n n 
C42 H421 PC7 sing 415 n n 
C42 H422 PC7 sing 416 n n 
C41 C40 PC7 sing 417 n n 
C41 H411 PC7 sing 418 n n 
C41 H412 PC7 sing 419 n n 
C40 C39 PC7 sing 420 n n 
C40 H401 PC7 sing 421 n n 
C40 H402 PC7 sing 422 n n 
C39 C38 PC7 sing 423 n n 
C39 H391 PC7 sing 424 n n 
C39 H392 PC7 sing 425 n n 
C38 C37 PC7 sing 426 n n 
C38 H381 PC7 sing 427 n n 
C38 H382 PC7 sing 428 n n 
C37 C36 PC7 sing 429 n n 
C37 H371 PC7 sing 430 n n 
C37 H372 PC7 sing 431 n n 
C36 C35 PC7 sing 432 n n 
C36 H361 PC7 sing 433 n n 
C36 H362 PC7 sing 434 n n 
C35 C34 PC7 sing 435 n n 
C35 H351 PC7 sing 436 n n 
C35 H352 PC7 sing 437 n n 
C34 C33 PC7 sing 438 n n 
C34 H341 PC7 sing 439 n n 
C34 H342 PC7 sing 440 n n 
C33 C32 PC7 sing 441 n n 
C33 H331 PC7 sing 442 n n 
C33 H332 PC7 sing 443 n n 
C32 C31 PC7 sing 444 n n 
C32 H321 PC7 sing 445 n n 
C32 H322 PC7 sing 446 n n 
C31 O31 PC7 doub 447 n n 
C31 O2 PC7 sing 448 n n 
O2 C2 PC7 sing 449 n n 
C2 C1 PC7 sing 450 n n 
C2 C3 PC7 sing 451 n n 
C2 H2 PC7 sing 452 n n 
C1 O3P PC7 sing 453 n n 
C1 H11 PC7 sing 454 n n 
C1 H12 PC7 sing 455 n n 
O3P P PC7 sing 456 n n 
P O1P PC7 sing 457 n n 
P O2P PC7 doub 458 n n 
P O4P PC7 sing 459 n n 
O1P HO1P PC7 sing 460 n n 
O4P C4 PC7 sing 461 n n 
C4 C5 PC7 sing 462 n n 
C4 H41 PC7 sing 463 n n 
C4 H42 PC7 sing 464 n n 
C5 N PC7 sing 465 n n 
C5 H51 PC7 sing 466 n n 
C5 H52 PC7 sing 467 n n 
N C7 PC7 sing 468 n n 
N C8 PC7 sing 469 n n 
N C6 PC7 sing 470 n n 
C7 H71 PC7 sing 471 n n 
C7 H72 PC7 sing 472 n n 
C7 H73 PC7 sing 473 n n 
C8 H81 PC7 sing 474 n n 
C8 H82 PC7 sing 475 n n 
C8 H83 PC7 sing 476 n n 
C6 H61 PC7 sing 477 n n 
C6 H62 PC7 sing 478 n n 
C6 H63 PC7 sing 479 n n 
C3 O3 PC7 sing 480 n n 
C3 H31 PC7 sing 481 n n 
C3 H32 PC7 sing 482 n n 
O3 C11 PC7 sing 483 n n 
C11 O11 PC7 doub 484 n n 
C11 C12 PC7 sing 485 n n 
C12 C13 PC7 sing 486 n n 
C12 H121 PC7 sing 487 n n 
C12 H122 PC7 sing 488 n n 
C13 C14 PC7 sing 489 n n 
C13 H131 PC7 sing 490 n n 
C13 H132 PC7 sing 491 n n 
C14 C15 PC7 sing 492 n n 
C14 H141 PC7 sing 493 n n 
C14 H142 PC7 sing 494 n n 
C15 C16 PC7 sing 495 n n 
C15 H151 PC7 sing 496 n n 
C15 H152 PC7 sing 497 n n 
C16 C17 PC7 sing 498 n n 
C16 H161 PC7 sing 499 n n 
C16 H162 PC7 sing 500 n n 
C17 C18 PC7 sing 501 n n 
C17 H171 PC7 sing 502 n n 
C17 H172 PC7 sing 503 n n 
C18 C19 PC7 sing 504 n n 
C18 H181 PC7 sing 505 n n 
C18 H182 PC7 sing 506 n n 
C19 C20 PC7 sing 507 n n 
C19 H191 PC7 sing 508 n n 
C19 H192 PC7 sing 509 n n 
C20 C21 PC7 sing 510 n n 
C20 H201 PC7 sing 511 n n 
C20 H202 PC7 sing 512 n n 
C21 C22 PC7 sing 513 n n 
C21 H211 PC7 sing 514 n n 
C21 H212 PC7 sing 515 n n 
C22 C23 PC7 sing 516 n n 
C22 H221 PC7 sing 517 n n 
C22 H222 PC7 sing 518 n n 
C23 C24 PC7 sing 519 n n 
C23 H231 PC7 sing 520 n n 
C23 H232 PC7 sing 521 n n 
C24 C25 PC7 sing 522 n n 
C24 H241 PC7 sing 523 n n 
C24 H242 PC7 sing 524 n n 
C25 C26 PC7 sing 525 n n 
C25 H251 PC7 sing 526 n n 
C25 H252 PC7 sing 527 n n 
C26 H261 PC7 sing 528 n n 
C26 H262 PC7 sing 529 n n 
C26 H263 PC7 sing 530 n n 
#
_atom_sites.entry_id                     7AQQ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
V 22 UQ9 H 1 401 500 UQ9 UQ9 . 
W 23 PTY H 1 402 1 PTY PTY . 
X 24 LMN M 1 501 7 LMN LMN . 
Y 23 PTY N 1 501 9 PTY PTY . 
Z 25 FE O 1 200 200 FE FE . 
AA 26 PC7 v 1 201 2 PC7 PC7 . 
BA 27 ZN y 1 301 300 ZN ZN . 
CA 28 PGT y 1 302 4 PGT PGT . 
DA 29 PSF z 1 301 5 PSF PSF . 
EA 30 T7X z 1 302 8 T7X T7X . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C48 PC7 . . . AA 26 274.099 223.226 218.723 1 53.47 ? C48 PC7 201 v 1 
HETATM 2 C C47 PC7 . . . AA 26 273.207 224.442 218.492 1 53.47 ? C47 PC7 201 v 1 
HETATM 3 C C46 PC7 . . . AA 26 272.747 225 219.834 1 53.47 ? C46 PC7 201 v 1 
HETATM 4 C C45 PC7 . . . AA 26 271.884 223.966 220.545 1 53.47 ? C45 PC7 201 v 1 
HETATM 5 C C44 PC7 . . . AA 26 271.318 224.566 221.829 1 53.47 ? C44 PC7 201 v 1 
HETATM 6 C C43 PC7 . . . AA 26 270.554 225.847 221.507 1 53.47 ? C43 PC7 201 v 1 
HETATM 7 C C42 PC7 . . . AA 26 269.799 226.324 222.747 1 53.47 ? C42 PC7 201 v 1 
HETATM 8 C C41 PC7 . . . AA 26 270.785 226.699 223.85 1 53.47 ? C41 PC7 201 v 1 
HETATM 9 C C40 PC7 . . . AA 26 270.48 225.891 225.11 1 53.47 ? C40 PC7 201 v 1 
HETATM 10 C C39 PC7 . . . AA 26 271.583 226.128 226.138 1 53.47 ? C39 PC7 201 v 1 
HETATM 11 C C38 PC7 . . . AA 26 271.133 225.6 227.497 1 53.47 ? C38 PC7 201 v 1 
HETATM 12 C C37 PC7 . . . AA 26 271.255 224.078 227.518 1 53.47 ? C37 PC7 201 v 1 
HETATM 13 C C36 PC7 . . . AA 26 272.71 223.687 227.275 1 53.47 ? C36 PC7 201 v 1 
HETATM 14 C C35 PC7 . . . AA 26 272.889 222.191 227.526 1 53.47 ? C35 PC7 201 v 1 
HETATM 15 C C34 PC7 . . . AA 26 272.493 221.862 228.964 1 53.47 ? C34 PC7 201 v 1 
HETATM 16 C C33 PC7 . . . AA 26 273.07 220.503 229.349 1 53.47 ? C33 PC7 201 v 1 
HETATM 17 C C32 PC7 . . . AA 26 274.521 220.684 229.788 1 53.47 ? C32 PC7 201 v 1 
HETATM 18 C C31 PC7 . . . AA 26 275.274 219.362 229.641 1 53.47 ? C31 PC7 201 v 1 
HETATM 19 O O31 PC7 . . . AA 26 275.068 218.664 228.707 1 53.47 ? O31 PC7 201 v 1 
HETATM 20 O O2 PC7 . . . AA 26 276.211 218.982 230.605 1 53.47 ? O2 PC7 201 v 1 
HETATM 21 C C2 PC7 . . . AA 26 275.658 218.333 231.712 1 53.47 ? C2 PC7 201 v 1 
HETATM 22 C C1 PC7 . . . AA 26 275.804 219.228 232.938 1 53.47 ? C1 PC7 201 v 1 
HETATM 23 O O3P PC7 . . . AA 26 276.732 218.671 233.821 1 53.47 ? O3P PC7 201 v 1 
HETATM 24 P P PC7 . . . AA 26 276.225 218.302 235.343 1 53.47 ? P PC7 201 v 1 
HETATM 25 O O1P PC7 . . . AA 26 276.221 219.545 236.2 1 53.47 ? O1P PC7 201 v 1 
HETATM 26 O O2P PC7 . . . AA 26 274.828 217.736 235.279 1 53.47 ? O2P PC7 201 v 1 
HETATM 27 O O4P PC7 . . . AA 26 277.236 217.181 235.993 1 53.47 ? O4P PC7 201 v 1 
HETATM 28 C C4 PC7 . . . AA 26 276.669 216.173 236.776 1 53.47 ? C4 PC7 201 v 1 
HETATM 29 C C5 PC7 . . . AA 26 277.448 216.02 238.082 1 53.47 ? C5 PC7 201 v 1 
HETATM 30 N N PC7 . . . AA 26 277.003 216.958 239.103 1 53.47 ? N PC7 201 v 1 
HETATM 31 C C7 PC7 . . . AA 26 277.724 218.21 238.964 1 53.47 ? C7 PC7 201 v 1 
HETATM 32 C C8 PC7 . . . AA 26 275.575 217.215 239.007 1 53.47 ? C8 PC7 201 v 1 
HETATM 33 C C6 PC7 . . . AA 26 277.288 216.393 240.408 1 53.47 ? C6 PC7 201 v 1 
HETATM 34 C C3 PC7 . . . AA 26 276.399 217.02 231.95 1 53.47 ? C3 PC7 201 v 1 
HETATM 35 O O3 PC7 . . . AA 26 277.235 216.75 230.863 1 53.47 ? O3 PC7 201 v 1 
HETATM 36 C C11 PC7 . . . AA 26 278.6 216.828 231.155 1 53.47 ? C11 PC7 201 v 1 
HETATM 37 O O11 PC7 . . . AA 26 279.252 215.842 231.213 1 53.47 ? O11 PC7 201 v 1 
HETATM 38 C C12 PC7 . . . AA 26 279.25 218.188 231.4 1 53.47 ? C12 PC7 201 v 1 
HETATM 39 C C13 PC7 . . . AA 26 279.402 218.92 230.068 1 53.47 ? C13 PC7 201 v 1 
HETATM 40 C C14 PC7 . . . AA 26 280.03 220.289 230.312 1 53.47 ? C14 PC7 201 v 1 
HETATM 41 C C15 PC7 . . . AA 26 281.5 220.253 229.908 1 53.47 ? C15 PC7 201 v 1 
HETATM 42 C C16 PC7 . . . AA 26 281.607 220.01 228.406 1 53.47 ? C16 PC7 201 v 1 
HETATM 43 C C17 PC7 . . . AA 26 282.86 220.696 227.869 1 53.47 ? C17 PC7 201 v 1 
HETATM 44 C C18 PC7 . . . AA 26 282.596 222.193 227.745 1 53.47 ? C18 PC7 201 v 1 
HETATM 45 C C19 PC7 . . . AA 26 281.863 222.448 226.43 1 53.47 ? C19 PC7 201 v 1 
HETATM 46 C C20 PC7 . . . AA 26 281.718 223.951 226.193 1 53.47 ? C20 PC7 201 v 1 
HETATM 47 C C21 PC7 . . . AA 26 282.207 224.305 224.787 1 53.47 ? C21 PC7 201 v 1 
HETATM 48 C C22 PC7 . . . AA 26 281.531 223.413 223.744 1 53.47 ? C22 PC7 201 v 1 
HETATM 49 C C23 PC7 . . . AA 26 280.064 223.811 223.581 1 53.47 ? C23 PC7 201 v 1 
HETATM 50 C C24 PC7 . . . AA 26 279.168 222.629 223.945 1 53.47 ? C24 PC7 201 v 1 
HETATM 51 C C25 PC7 . . . AA 26 279.358 221.51 222.926 1 53.47 ? C25 PC7 201 v 1 
HETATM 52 C C26 PC7 . . . AA 26 278.883 221.989 221.555 1 53.47 ? C26 PC7 201 v 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           52 
#