data_7AR4 # _model_server_result.job_id ZE2ZbG2YW1J6n2dCI_SDUw _model_server_result.datetime_utc '2024-12-26 18:20:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ar4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 7AR4 # _exptl.entry_id 7AR4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AR4 _cell.length_a 71.38 _cell.length_b 85.62 _cell.length_c 142.71 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AR4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C BAL 1 PaP BAL 1 1_555 B N VAL 2 PaP VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 B N BAL 1 PaP BAL 1 1_555 B C BAL 16 PaP BAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale3 B C VAL 7 PaP VAL 7 1_555 B N DPR 8 PaP DPR 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale4 B C DPR 8 PaP DPR 8 1_555 B N PRO 9 PaP PRO 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale5 B C PHE 15 PaP PHE 15 1_555 B N BAL 16 PaP BAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 112 n n N1 C6 EPE sing 113 n n N1 C9 EPE sing 114 n n C2 C3 EPE sing 115 n n C2 H21 EPE sing 116 n n C2 H22 EPE sing 117 n n C3 N4 EPE sing 118 n n C3 H31 EPE sing 119 n n C3 H32 EPE sing 120 n n N4 C5 EPE sing 121 n n N4 C7 EPE sing 122 n n C5 C6 EPE sing 123 n n C5 H51 EPE sing 124 n n C5 H52 EPE sing 125 n n C6 H61 EPE sing 126 n n C6 H62 EPE sing 127 n n C7 C8 EPE sing 128 n n C7 H71 EPE sing 129 n n C7 H72 EPE sing 130 n n C8 O8 EPE sing 131 n n C8 H81 EPE sing 132 n n C8 H82 EPE sing 133 n n O8 HO8 EPE sing 134 n n C9 C10 EPE sing 135 n n C9 H91 EPE sing 136 n n C9 H92 EPE sing 137 n n C10 S EPE sing 138 n n C10 H101 EPE sing 139 n n C10 H102 EPE sing 140 n n S O1S EPE doub 141 n n S O2S EPE doub 142 n n S O3S EPE sing 143 n n O3S HOS3 EPE sing 144 n n # _atom_sites.entry_id 7AR4 _atom_sites.fract_transf_matrix[1][1] 0.01401 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007007 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EPE AAA 1 701 701 EPE EPE . D 4 CL AAA 1 702 1 CL CL . E 5 HOH AAA 1 801 38 HOH HOH . E 5 HOH AAA 2 802 24 HOH HOH . E 5 HOH AAA 3 803 44 HOH HOH . E 5 HOH AAA 4 804 37 HOH HOH . E 5 HOH AAA 5 805 11 HOH HOH . E 5 HOH AAA 6 806 50 HOH HOH . E 5 HOH AAA 7 807 40 HOH HOH . E 5 HOH AAA 8 808 29 HOH HOH . E 5 HOH AAA 9 809 2 HOH HOH . E 5 HOH AAA 10 810 16 HOH HOH . E 5 HOH AAA 11 811 5 HOH HOH . E 5 HOH AAA 12 812 36 HOH HOH . E 5 HOH AAA 13 813 48 HOH HOH . E 5 HOH AAA 14 814 30 HOH HOH . E 5 HOH AAA 15 815 27 HOH HOH . E 5 HOH AAA 16 816 41 HOH HOH . E 5 HOH AAA 17 817 31 HOH HOH . E 5 HOH AAA 18 818 1 HOH HOH . E 5 HOH AAA 19 819 49 HOH HOH . E 5 HOH AAA 20 820 14 HOH HOH . E 5 HOH AAA 21 821 20 HOH HOH . E 5 HOH AAA 22 822 21 HOH HOH . E 5 HOH AAA 23 823 15 HOH HOH . E 5 HOH AAA 24 824 17 HOH HOH . E 5 HOH AAA 25 825 28 HOH HOH . E 5 HOH AAA 26 826 34 HOH HOH . E 5 HOH AAA 27 827 8 HOH HOH . E 5 HOH AAA 28 828 18 HOH HOH . E 5 HOH AAA 29 829 33 HOH HOH . E 5 HOH AAA 30 830 35 HOH HOH . E 5 HOH AAA 31 831 9 HOH HOH . E 5 HOH AAA 32 832 45 HOH HOH . E 5 HOH AAA 33 833 10 HOH HOH . E 5 HOH AAA 34 834 3 HOH HOH . E 5 HOH AAA 35 835 47 HOH HOH . E 5 HOH AAA 36 836 13 HOH HOH . E 5 HOH AAA 37 837 12 HOH HOH . E 5 HOH AAA 38 838 22 HOH HOH . E 5 HOH AAA 39 839 51 HOH HOH . E 5 HOH AAA 40 840 52 HOH HOH . E 5 HOH AAA 41 841 6 HOH HOH . E 5 HOH AAA 42 842 42 HOH HOH . E 5 HOH AAA 43 843 43 HOH HOH . E 5 HOH AAA 44 844 46 HOH HOH . E 5 HOH AAA 45 845 25 HOH HOH . F 5 HOH PaP 1 701 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . C 3 -5.589 -13.16 -13.593 1 137.67 ? N1 EPE 701 AAA 1 HETATM 2 C C2 EPE . . . C 3 -5.739 -14.203 -14.635 1 136.09 ? C2 EPE 701 AAA 1 HETATM 3 C C3 EPE . . . C 3 -6.183 -15.562 -14.083 1 134.64 ? C3 EPE 701 AAA 1 HETATM 4 N N4 EPE . . . C 3 -6.753 -15.428 -12.731 1 135.13 ? N4 EPE 701 AAA 1 HETATM 5 C C5 EPE . . . C 3 -7.651 -14.259 -12.687 1 136.51 ? C5 EPE 701 AAA 1 HETATM 6 C C6 EPE . . . C 3 -6.826 -12.98 -12.791 1 137.36 ? C6 EPE 701 AAA 1 HETATM 7 C C7 EPE . . . C 3 -7.403 -16.677 -12.276 1 132.9 ? C7 EPE 701 AAA 1 HETATM 8 C C8 EPE . . . C 3 -8.851 -16.806 -12.738 1 131.97 ? C8 EPE 701 AAA 1 HETATM 9 O O8 EPE . . . C 3 -9.286 -18.139 -12.472 1 131.79 ? O8 EPE 701 AAA 1 HETATM 10 C C9 EPE . . . C 3 -4.386 -13.386 -12.756 1 137.55 ? C9 EPE 701 AAA 1 HETATM 11 C C10 EPE . . . C 3 -3.176 -12.704 -13.394 1 138.13 ? C10 EPE 701 AAA 1 HETATM 12 S S EPE . . . C 3 -1.95 -12.479 -12.283 1 138.4 ? S EPE 701 AAA 1 HETATM 13 O O1S EPE . . . C 3 -1.811 -13.681 -11.444 1 139.16 ? O1S EPE 701 AAA 1 HETATM 14 O O2S EPE . . . C 3 -0.665 -12.254 -12.977 1 132.15 ? O2S EPE 701 AAA 1 HETATM 15 O O3S EPE . . . C 3 -2.27 -11.319 -11.417 1 138 ? O3S EPE 701 AAA 1 HETATM 16 H H21 EPE . . . C 3 -6.47 -13.864 -15.373 1 136.12 ? H21 EPE 701 AAA 1 HETATM 17 H H22 EPE . . . C 3 -4.786 -14.326 -15.154 1 136.12 ? H22 EPE 701 AAA 1 HETATM 18 H H31 EPE . . . C 3 -6.924 -16 -14.755 1 135.04 ? H31 EPE 701 AAA 1 HETATM 19 H H32 EPE . . . C 3 -5.325 -16.236 -14.051 1 134.89 ? H32 EPE 701 AAA 1 HETATM 20 H H51 EPE . . . C 3 -8.364 -14.296 -13.514 1 136.35 ? H51 EPE 701 AAA 1 HETATM 21 H H52 EPE . . . C 3 -8.21 -14.252 -11.749 1 136.36 ? H52 EPE 701 AAA 1 HETATM 22 H H61 EPE . . . C 3 -6.583 -12.63 -11.786 1 137.23 ? H61 EPE 701 AAA 1 HETATM 23 H H62 EPE . . . C 3 -7.438 -12.207 -13.261 1 137.23 ? H62 EPE 701 AAA 1 HETATM 24 H H71 EPE . . . C 3 -7.375 -16.713 -11.185 1 133.2 ? H71 EPE 701 AAA 1 HETATM 25 H H72 EPE . . . C 3 -6.834 -17.533 -12.645 1 133.2 ? H72 EPE 701 AAA 1 HETATM 26 H H81 EPE . . . C 3 -8.931 -16.595 -13.806 1 132.17 ? H81 EPE 701 AAA 1 HETATM 27 H H82 EPE . . . C 3 -9.492 -16.109 -12.196 1 132.17 ? H82 EPE 701 AAA 1 HETATM 28 H HO8 EPE . . . C 3 -10.124 -18.332 -13.13 0 126.41 ? HO8 EPE 701 AAA 1 HETATM 29 H H91 EPE . . . C 3 -4.537 -12.981 -11.753 1 137.43 ? H91 EPE 701 AAA 1 HETATM 30 H H92 EPE . . . C 3 -4.185 -14.454 -12.655 1 137.65 ? H92 EPE 701 AAA 1 HETATM 31 H H101 EPE . . . C 3 -2.809 -13.314 -14.221 1 138.05 ? H101 EPE 701 AAA 1 HETATM 32 H H102 EPE . . . C 3 -3.478 -11.736 -13.8 1 138.05 ? H102 EPE 701 AAA 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #