data_7ARF
#
_model_server_result.job_id            AWTx5hoOd4qiAGOM9dm7Xw 
_model_server_result.datetime_utc      '2024-11-07 18:55:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7arf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    7ARF 
#
_exptl.entry_id    7ARF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.138 
_cell.angle_gamma         90 
_cell.entry_id            7ARF 
_cell.length_a            113.346 
_cell.length_b            53.757 
_cell.length_c            44.607 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ARF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 144 A SER 144 1_555 A N CSD 145 A CSD 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 A C CSD 145 A CSD 145 1_555 A N GLY 146 A GLY 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A SG CYS 156 A CYS 156 1_555 B S1 RVW . A RVW 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 98 n n 
S C1 DMS sing 99 n n 
S C2 DMS sing 100 n n 
C1 H11 DMS sing 101 n n 
C1 H12 DMS sing 102 n n 
C1 H13 DMS sing 103 n n 
C2 H21 DMS sing 104 n n 
C2 H22 DMS sing 105 n n 
C2 H23 DMS sing 106 n n 
#
_atom_sites.entry_id                     7ARF 
_atom_sites.fract_transf_matrix[1][1]    0.008823 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001898 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018602 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022931 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RVW A 1 401 401 RVW LIG . 
C 3 DMS A 1 402 501 DMS DMS . 
D 3 DMS A 1 403 601 DMS DMS . 
E 4 CL A 1 404 1 CL CL . 
F 5 HOH A 1 501 37 HOH HOH . 
F 5 HOH A 2 502 57 HOH HOH . 
F 5 HOH A 3 503 43 HOH HOH . 
F 5 HOH A 4 504 79 HOH HOH . 
F 5 HOH A 5 505 71 HOH HOH . 
F 5 HOH A 6 506 80 HOH HOH . 
F 5 HOH A 7 507 40 HOH HOH . 
F 5 HOH A 8 508 55 HOH HOH . 
F 5 HOH A 9 509 51 HOH HOH . 
F 5 HOH A 10 510 96 HOH HOH . 
F 5 HOH A 11 511 52 HOH HOH . 
F 5 HOH A 12 512 36 HOH HOH . 
F 5 HOH A 13 513 31 HOH HOH . 
F 5 HOH A 14 514 46 HOH HOH . 
F 5 HOH A 15 515 27 HOH HOH . 
F 5 HOH A 16 516 100 HOH HOH . 
F 5 HOH A 17 517 76 HOH HOH . 
F 5 HOH A 18 518 88 HOH HOH . 
F 5 HOH A 19 519 33 HOH HOH . 
F 5 HOH A 20 520 14 HOH HOH . 
F 5 HOH A 21 521 63 HOH HOH . 
F 5 HOH A 22 522 99 HOH HOH . 
F 5 HOH A 23 523 66 HOH HOH . 
F 5 HOH A 24 524 23 HOH HOH . 
F 5 HOH A 25 525 10 HOH HOH . 
F 5 HOH A 26 526 41 HOH HOH . 
F 5 HOH A 27 527 74 HOH HOH . 
F 5 HOH A 28 528 16 HOH HOH . 
F 5 HOH A 29 529 8 HOH HOH . 
F 5 HOH A 30 530 48 HOH HOH . 
F 5 HOH A 31 531 42 HOH HOH . 
F 5 HOH A 32 532 84 HOH HOH . 
F 5 HOH A 33 533 22 HOH HOH . 
F 5 HOH A 34 534 6 HOH HOH . 
F 5 HOH A 35 535 44 HOH HOH . 
F 5 HOH A 36 536 18 HOH HOH . 
F 5 HOH A 37 537 35 HOH HOH . 
F 5 HOH A 38 538 17 HOH HOH . 
F 5 HOH A 39 539 5 HOH HOH . 
F 5 HOH A 40 540 15 HOH HOH . 
F 5 HOH A 41 541 2 HOH HOH . 
F 5 HOH A 42 542 1 HOH HOH . 
F 5 HOH A 43 543 11 HOH HOH . 
F 5 HOH A 44 544 4 HOH HOH . 
F 5 HOH A 45 545 49 HOH HOH . 
F 5 HOH A 46 546 73 HOH HOH . 
F 5 HOH A 47 547 7 HOH HOH . 
F 5 HOH A 48 548 98 HOH HOH . 
F 5 HOH A 49 549 28 HOH HOH . 
F 5 HOH A 50 550 30 HOH HOH . 
F 5 HOH A 51 551 12 HOH HOH . 
F 5 HOH A 52 552 32 HOH HOH . 
F 5 HOH A 53 553 20 HOH HOH . 
F 5 HOH A 54 554 24 HOH HOH . 
F 5 HOH A 55 555 21 HOH HOH . 
F 5 HOH A 56 556 45 HOH HOH . 
F 5 HOH A 57 557 13 HOH HOH . 
F 5 HOH A 58 558 87 HOH HOH . 
F 5 HOH A 59 559 26 HOH HOH . 
F 5 HOH A 60 560 9 HOH HOH . 
F 5 HOH A 61 561 101 HOH HOH . 
F 5 HOH A 62 562 56 HOH HOH . 
F 5 HOH A 63 563 59 HOH HOH . 
F 5 HOH A 64 564 29 HOH HOH . 
F 5 HOH A 65 565 54 HOH HOH . 
F 5 HOH A 66 566 3 HOH HOH . 
F 5 HOH A 67 567 92 HOH HOH . 
F 5 HOH A 68 568 103 HOH HOH . 
F 5 HOH A 69 569 53 HOH HOH . 
F 5 HOH A 70 570 64 HOH HOH . 
F 5 HOH A 71 571 39 HOH HOH . 
F 5 HOH A 72 572 19 HOH HOH . 
F 5 HOH A 73 573 75 HOH HOH . 
F 5 HOH A 74 574 65 HOH HOH . 
F 5 HOH A 75 575 102 HOH HOH . 
F 5 HOH A 76 576 47 HOH HOH . 
F 5 HOH A 77 577 25 HOH HOH . 
F 5 HOH A 78 578 62 HOH HOH . 
F 5 HOH A 79 579 89 HOH HOH . 
F 5 HOH A 80 580 34 HOH HOH . 
F 5 HOH A 81 581 67 HOH HOH . 
F 5 HOH A 82 582 93 HOH HOH . 
F 5 HOH A 83 583 68 HOH HOH . 
F 5 HOH A 84 584 97 HOH HOH . 
F 5 HOH A 85 585 77 HOH HOH . 
F 5 HOH A 86 586 90 HOH HOH . 
F 5 HOH A 87 587 61 HOH HOH . 
F 5 HOH A 88 588 78 HOH HOH . 
F 5 HOH A 89 589 81 HOH HOH . 
F 5 HOH A 90 590 38 HOH HOH . 
F 5 HOH A 91 591 50 HOH HOH . 
F 5 HOH A 92 592 69 HOH HOH . 
F 5 HOH A 93 593 82 HOH HOH . 
F 5 HOH A 94 594 91 HOH HOH . 
F 5 HOH A 95 595 86 HOH HOH . 
F 5 HOH A 96 596 83 HOH HOH . 
F 5 HOH A 97 597 58 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 6.323 -1.171 -6.758 1 78.53 ? S DMS 403 A 1 
HETATM 2 O O DMS . . . D 3 7.209 -1.589 -7.86 1 68.46 ? O DMS 403 A 1 
HETATM 3 C C1 DMS . . . D 3 7.42 -0.791 -5.569 1 57.44 ? C1 DMS 403 A 1 
HETATM 4 C C2 DMS . . . D 3 5.731 -2.588 -6.167 1 52.83 ? C2 DMS 403 A 1 
HETATM 5 H H11 DMS . . . D 3 6.992 -0.765 -4.699 1 69.15 ? H11 DMS 403 A 1 
HETATM 6 H H12 DMS . . . D 3 7.82 0.078 -5.732 1 69.15 ? H12 DMS 403 A 1 
HETATM 7 H H13 DMS . . . D 3 8.133 -1.448 -5.534 1 69.15 ? H13 DMS 403 A 1 
HETATM 8 H H21 DMS . . . D 3 4.764 -2.559 -6.104 1 63.62 ? H21 DMS 403 A 1 
HETATM 9 H H22 DMS . . . D 3 6.085 -2.767 -5.281 1 63.62 ? H22 DMS 403 A 1 
HETATM 10 H H23 DMS . . . D 3 5.973 -3.33 -6.743 1 63.62 ? H23 DMS 403 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#