data_7ARJ
#
_model_server_result.job_id            zzpnnh0MBxtpVeSiJsWneA 
_model_server_result.datetime_utc      '2025-02-27 01:50:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7arj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":101}' 
#
_entry.id    7ARJ 
#
_exptl.entry_id    7ARJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              568.911 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-hydroxypropane-1,2-diyl dihexadecanoate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7ARJ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ARJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 E SG CYS 1 V CYS 1 1_555 J C35 Z41 . V Z41 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.763 ? 
covale ? covale2 E N CYS 1 V CYS 1 1_555 K C1 PLM . V PLM 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
metalc ? metalc1 C OD1 ASP 170 F ASP 170 1_555 G MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? 
metalc ? metalc2 C OD2 ASP 170 F ASP 170 1_555 G MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? 
metalc ? metalc3 D OD2 ASP 170 D ASP 170 1_555 I MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? 
metalc ? metalc4 H O1G ANP . D ANP 401 1_555 I MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? 
#
_chem_comp.formula           'C35 H68 O5' 
_chem_comp.formula_weight    568.911 
_chem_comp.id                Z41 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-hydroxypropane-1,2-diyl dihexadecanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 Z41 sing 473 n n 
C1 H11 Z41 sing 474 n n 
C1 H12 Z41 sing 475 n n 
C1 H13 Z41 sing 476 n n 
C2 C3 Z41 sing 477 n n 
C2 H21 Z41 sing 478 n n 
C2 H22 Z41 sing 479 n n 
C3 C4 Z41 sing 480 n n 
C3 H31 Z41 sing 481 n n 
C3 H32 Z41 sing 482 n n 
C4 C5 Z41 sing 483 n n 
C4 H41 Z41 sing 484 n n 
C4 H42 Z41 sing 485 n n 
C5 C6 Z41 sing 486 n n 
C5 H51 Z41 sing 487 n n 
C5 H52 Z41 sing 488 n n 
C6 C7 Z41 sing 489 n n 
C6 H61 Z41 sing 490 n n 
C6 H62 Z41 sing 491 n n 
C7 C8 Z41 sing 492 n n 
C7 H71 Z41 sing 493 n n 
C7 H72 Z41 sing 494 n n 
C8 C9 Z41 sing 495 n n 
C8 H81 Z41 sing 496 n n 
C8 H82 Z41 sing 497 n n 
C9 C10 Z41 sing 498 n n 
C9 H91 Z41 sing 499 n n 
C9 H92 Z41 sing 500 n n 
C10 C11 Z41 sing 501 n n 
C10 H101 Z41 sing 502 n n 
C10 H102 Z41 sing 503 n n 
C11 C12 Z41 sing 504 n n 
C11 H111 Z41 sing 505 n n 
C11 H112 Z41 sing 506 n n 
C12 C13 Z41 sing 507 n n 
C12 H121 Z41 sing 508 n n 
C12 H122 Z41 sing 509 n n 
C13 C14 Z41 sing 510 n n 
C13 H131 Z41 sing 511 n n 
C13 H132 Z41 sing 512 n n 
C14 C15 Z41 sing 513 n n 
C14 H141 Z41 sing 514 n n 
C14 H142 Z41 sing 515 n n 
C15 C16 Z41 sing 516 n n 
C15 H151 Z41 sing 517 n n 
C15 H152 Z41 sing 518 n n 
C16 O1 Z41 doub 519 n n 
C16 O2 Z41 sing 520 n n 
O2 C17 Z41 sing 521 n n 
C17 C18 Z41 sing 522 n n 
C17 H171 Z41 sing 523 n n 
C17 H172 Z41 sing 524 n n 
C18 O3 Z41 sing 525 n n 
C18 C35 Z41 sing 526 n n 
C18 H181 Z41 sing 527 n n 
O3 C19 Z41 sing 528 n n 
C19 O4 Z41 doub 529 n n 
C19 C20 Z41 sing 530 n n 
C20 C21 Z41 sing 531 n n 
C20 H201 Z41 sing 532 n n 
C20 H202 Z41 sing 533 n n 
C21 C22 Z41 sing 534 n n 
C21 H211 Z41 sing 535 n n 
C21 H212 Z41 sing 536 n n 
C22 C23 Z41 sing 537 n n 
C22 H221 Z41 sing 538 n n 
C22 H222 Z41 sing 539 n n 
C23 C24 Z41 sing 540 n n 
C23 H231 Z41 sing 541 n n 
C23 H232 Z41 sing 542 n n 
C24 C25 Z41 sing 543 n n 
C24 H241 Z41 sing 544 n n 
C24 H242 Z41 sing 545 n n 
C25 C26 Z41 sing 546 n n 
C25 H251 Z41 sing 547 n n 
C25 H252 Z41 sing 548 n n 
C26 C27 Z41 sing 549 n n 
C26 H261 Z41 sing 550 n n 
C26 H262 Z41 sing 551 n n 
C27 C28 Z41 sing 552 n n 
C27 H271 Z41 sing 553 n n 
C27 H272 Z41 sing 554 n n 
C28 C29 Z41 sing 555 n n 
C28 H281 Z41 sing 556 n n 
C28 H282 Z41 sing 557 n n 
C29 C30 Z41 sing 558 n n 
C29 H291 Z41 sing 559 n n 
C29 H292 Z41 sing 560 n n 
C30 C31 Z41 sing 561 n n 
C30 H301 Z41 sing 562 n n 
C30 H302 Z41 sing 563 n n 
C31 C32 Z41 sing 564 n n 
C31 H311 Z41 sing 565 n n 
C31 H312 Z41 sing 566 n n 
C32 C33 Z41 sing 567 n n 
C32 H321 Z41 sing 568 n n 
C32 H322 Z41 sing 569 n n 
C33 C34 Z41 sing 570 n n 
C33 H331 Z41 sing 571 n n 
C33 H332 Z41 sing 572 n n 
C34 H341 Z41 sing 573 n n 
C34 H342 Z41 sing 574 n n 
C34 H343 Z41 sing 575 n n 
C35 O5 Z41 sing 576 n n 
C35 H351 Z41 sing 577 n n 
C35 H352 Z41 sing 578 n n 
H5O O5 Z41 sing 579 n n 
#
_atom_sites.entry_id                     7ARJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 5 ANP F 1 401 401 ANP ANP . 
G 6 MG F 1 402 2 MG MG . 
H 5 ANP D 1 401 401 ANP ANP . 
I 6 MG D 1 402 1 MG MG . 
J 7 Z41 V 1 101 101 Z41 DAG . 
K 8 PLM V 1 102 201 PLM ACY . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 Z41 . . . J 7 130.13 119.436 128.028 1 74.26 ? C1 Z41 101 V 1 
HETATM 2 C C2 Z41 . . . J 7 130.532 120.111 129.321 1 74.26 ? C2 Z41 101 V 1 
HETATM 3 C C3 Z41 . . . J 7 131.906 119.637 129.783 1 74.26 ? C3 Z41 101 V 1 
HETATM 4 C C4 Z41 . . . J 7 131.877 118.162 130.163 1 74.26 ? C4 Z41 101 V 1 
HETATM 5 C C5 Z41 . . . J 7 133.219 117.712 130.729 1 74.26 ? C5 Z41 101 V 1 
HETATM 6 C C6 Z41 . . . J 7 133.075 116.391 131.477 1 74.26 ? C6 Z41 101 V 1 
HETATM 7 C C7 Z41 . . . J 7 132.13 116.528 132.667 1 74.26 ? C7 Z41 101 V 1 
HETATM 8 C C8 Z41 . . . J 7 132.734 117.415 133.751 1 74.26 ? C8 Z41 101 V 1 
HETATM 9 C C9 Z41 . . . J 7 131.833 118.605 134.064 1 74.26 ? C9 Z41 101 V 1 
HETATM 10 C C10 Z41 . . . J 7 130.654 118.208 134.943 1 74.26 ? C10 Z41 101 V 1 
HETATM 11 C C11 Z41 . . . J 7 129.716 119.392 135.149 1 74.26 ? C11 Z41 101 V 1 
HETATM 12 C C12 Z41 . . . J 7 129.052 119.334 136.52 1 74.26 ? C12 Z41 101 V 1 
HETATM 13 C C13 Z41 . . . J 7 128.228 118.062 136.684 1 74.26 ? C13 Z41 101 V 1 
HETATM 14 C C14 Z41 . . . J 7 128.224 117.613 138.141 1 74.26 ? C14 Z41 101 V 1 
HETATM 15 C C15 Z41 . . . J 7 127.56 118.65 139.038 1 74.26 ? C15 Z41 101 V 1 
HETATM 16 C C16 Z41 . . . J 7 126.12 118.261 139.274 1 74.26 ? C16 Z41 101 V 1 
HETATM 17 O O1 Z41 . . . J 7 125.835 117.122 139.604 1 74.26 ? O1 Z41 101 V 1 
HETATM 18 O O2 Z41 . . . J 7 125.053 119.239 139.122 1 74.26 ? O2 Z41 101 V 1 
HETATM 19 C C17 Z41 . . . J 7 124.844 120.234 140.122 1 74.26 ? C17 Z41 101 V 1 
HETATM 20 C C18 Z41 . . . J 7 125.314 121.596 139.623 1 74.26 ? C18 Z41 101 V 1 
HETATM 21 O O3 Z41 . . . J 7 124.192 122.452 139.417 1 74.26 ? O3 Z41 101 V 1 
HETATM 22 C C19 Z41 . . . J 7 123.567 122.259 138.118 1 74.26 ? C19 Z41 101 V 1 
HETATM 23 O O4 Z41 . . . J 7 124.196 122.535 137.109 1 74.26 ? O4 Z41 101 V 1 
HETATM 24 C C20 Z41 . . . J 7 122.154 121.734 138.033 1 74.26 ? C20 Z41 101 V 1 
HETATM 25 C C21 Z41 . . . J 7 121.163 122.892 137.966 1 74.26 ? C21 Z41 101 V 1 
HETATM 26 C C22 Z41 . . . J 7 120.823 123.247 136.524 1 74.26 ? C22 Z41 101 V 1 
HETATM 27 C C23 Z41 . . . J 7 121.638 124.435 136.025 1 74.26 ? C23 Z41 101 V 1 
HETATM 28 C C24 Z41 . . . J 7 121.814 124.383 134.511 1 74.26 ? C24 Z41 101 V 1 
HETATM 29 C C25 Z41 . . . J 7 120.473 124.289 133.792 1 74.26 ? C25 Z41 101 V 1 
HETATM 30 C C26 Z41 . . . J 7 119.745 125.629 133.788 1 74.26 ? C26 Z41 101 V 1 
HETATM 31 C C27 Z41 . . . J 7 118.245 125.442 133.988 1 74.26 ? C27 Z41 101 V 1 
HETATM 32 C C28 Z41 . . . J 7 117.65 124.486 132.96 1 74.26 ? C28 Z41 101 V 1 
HETATM 33 C C29 Z41 . . . J 7 117.499 125.146 131.595 1 74.26 ? C29 Z41 101 V 1 
HETATM 34 C C30 Z41 . . . J 7 116.984 124.14 130.573 1 74.26 ? C30 Z41 101 V 1 
HETATM 35 C C31 Z41 . . . J 7 116.461 124.834 129.321 1 74.26 ? C31 Z41 101 V 1 
HETATM 36 C C32 Z41 . . . J 7 115.99 123.809 128.296 1 74.26 ? C32 Z41 101 V 1 
HETATM 37 C C33 Z41 . . . J 7 114.711 124.265 127.602 1 74.26 ? C33 Z41 101 V 1 
HETATM 38 C C34 Z41 . . . J 7 114.925 125.557 126.844 1 74.26 ? C34 Z41 101 V 1 
HETATM 39 C C35 Z41 . . . J 7 126.261 122.243 140.626 1 74.26 ? C35 Z41 101 V 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           39 
#