data_7AS2 # _model_server_result.job_id zSip2oPcQSvPc7DryS86cQ _model_server_result.datetime_utc '2024-11-16 15:46:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7as2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7AS2 # _exptl.entry_id 7AS2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 399.394 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S,3S)-3-[[5-fluoranyl-2-(5-fluoranyl-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 71.85 _cell.angle_beta 75.39 _cell.angle_gamma 75.92 _cell.entry_id 7AS2 _cell.length_a 29.19 _cell.length_b 37.12 _cell.length_c 38.45 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AS2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H19 F2 N5 O2' _chem_comp.formula_weight 399.394 _chem_comp.id 21G _chem_comp.mon_nstd_flag . _chem_comp.name '(2S,3S)-3-[[5-fluoranyl-2-(5-fluoranyl-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '3-[[5-fluoro-2-(5-fluoro-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid;VX787;(2S,3S)-3-((5-fluoro-2-(5-fluoro-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl)amino)bicyclo[2.2.2]octane-2-carboxylic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N9 C5 21G sing 1 n y N9 C8 21G sing 2 n y N4 C5 21G sing 3 n y N4 C3 21G doub 4 n y C5 C6 21G doub 5 n y C8 C7 21G doub 6 n y C3 C2 21G sing 7 n y C6 C7 21G sing 8 n y C6 C1 21G sing 9 n y C7 C11 21G sing 10 n n C2 C1 21G doub 11 n y C2 F32 21G sing 12 n n N12 C11 21G doub 13 n y N12 C13 21G sing 14 n y C11 N16 21G sing 15 n y C13 C14 21G doub 16 n y N16 C15 21G doub 17 n y C15 C14 21G sing 18 n y C15 N17 21G sing 19 n n C14 F31 21G sing 20 n n O30 C28 21G doub 21 n n N17 C18 21G sing 22 n n C18 C25 21G sing 23 n n C18 C20 21G sing 24 n n C28 O29 21G sing 25 n n C28 C20 21G sing 26 n n C24 C25 21G sing 27 n n C24 C23 21G sing 28 n n C25 C26 21G sing 29 n n C20 C22 21G sing 30 n n C23 C22 21G sing 31 n n C26 C27 21G sing 32 n n C22 C27 21G sing 33 n n C1 H1 21G sing 34 n n C3 H2 21G sing 35 n n C8 H3 21G sing 36 n n N9 H4 21G sing 37 n n C13 H5 21G sing 38 n n N17 H6 21G sing 39 n n C18 H7 21G sing 40 n n C20 H8 21G sing 41 n n C22 H9 21G sing 42 n n C23 H10 21G sing 43 n n C23 H11 21G sing 44 n n C24 H12 21G sing 45 n n C24 H13 21G sing 46 n n C25 H14 21G sing 47 n n C26 H15 21G sing 48 n n C26 H16 21G sing 49 n n C27 H17 21G sing 50 n n C27 H18 21G sing 51 n n O29 H19 21G sing 52 n n # _atom_sites.entry_id 7AS2 _atom_sites.fract_transf_matrix[1][1] 0.034258 _atom_sites.fract_transf_matrix[1][2] -0.00859 _atom_sites.fract_transf_matrix[1][3] -0.006887 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027774 _atom_sites.fract_transf_matrix[2][3] -0.00768 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027885 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 21G A 1 501 1 21G QQ5 . C 3 HOH A 1 601 42 HOH HOH . C 3 HOH A 2 602 64 HOH HOH . C 3 HOH A 3 603 15 HOH HOH . C 3 HOH A 4 604 155 HOH HOH . C 3 HOH A 5 605 142 HOH HOH . C 3 HOH A 6 606 166 HOH HOH . C 3 HOH A 7 607 89 HOH HOH . C 3 HOH A 8 608 110 HOH HOH . C 3 HOH A 9 609 150 HOH HOH . C 3 HOH A 10 610 95 HOH HOH . C 3 HOH A 11 611 27 HOH HOH . C 3 HOH A 12 612 77 HOH HOH . C 3 HOH A 13 613 169 HOH HOH . C 3 HOH A 14 614 168 HOH HOH . C 3 HOH A 15 615 135 HOH HOH . C 3 HOH A 16 616 94 HOH HOH . C 3 HOH A 17 617 50 HOH HOH . C 3 HOH A 18 618 83 HOH HOH . C 3 HOH A 19 619 163 HOH HOH . C 3 HOH A 20 620 52 HOH HOH . C 3 HOH A 21 621 97 HOH HOH . C 3 HOH A 22 622 105 HOH HOH . C 3 HOH A 23 623 59 HOH HOH . C 3 HOH A 24 624 46 HOH HOH . C 3 HOH A 25 625 92 HOH HOH . C 3 HOH A 26 626 85 HOH HOH . C 3 HOH A 27 627 18 HOH HOH . C 3 HOH A 28 628 81 HOH HOH . C 3 HOH A 29 629 23 HOH HOH . C 3 HOH A 30 630 104 HOH HOH . C 3 HOH A 31 631 121 HOH HOH . C 3 HOH A 32 632 16 HOH HOH . C 3 HOH A 33 633 29 HOH HOH . C 3 HOH A 34 634 144 HOH HOH . C 3 HOH A 35 635 26 HOH HOH . C 3 HOH A 36 636 3 HOH HOH . C 3 HOH A 37 637 20 HOH HOH . C 3 HOH A 38 638 61 HOH HOH . C 3 HOH A 39 639 33 HOH HOH . C 3 HOH A 40 640 45 HOH HOH . C 3 HOH A 41 641 19 HOH HOH . C 3 HOH A 42 642 111 HOH HOH . C 3 HOH A 43 643 48 HOH HOH . C 3 HOH A 44 644 11 HOH HOH . C 3 HOH A 45 645 162 HOH HOH . C 3 HOH A 46 646 70 HOH HOH . C 3 HOH A 47 647 55 HOH HOH . C 3 HOH A 48 648 128 HOH HOH . C 3 HOH A 49 649 100 HOH HOH . C 3 HOH A 50 650 8 HOH HOH . C 3 HOH A 51 651 72 HOH HOH . C 3 HOH A 52 652 148 HOH HOH . C 3 HOH A 53 653 14 HOH HOH . C 3 HOH A 54 654 36 HOH HOH . C 3 HOH A 55 655 12 HOH HOH . C 3 HOH A 56 656 47 HOH HOH . C 3 HOH A 57 657 21 HOH HOH . C 3 HOH A 58 658 38 HOH HOH . C 3 HOH A 59 659 65 HOH HOH . C 3 HOH A 60 660 22 HOH HOH . C 3 HOH A 61 661 4 HOH HOH . C 3 HOH A 62 662 34 HOH HOH . C 3 HOH A 63 663 68 HOH HOH . C 3 HOH A 64 664 99 HOH HOH . C 3 HOH A 65 665 127 HOH HOH . C 3 HOH A 66 666 24 HOH HOH . C 3 HOH A 67 667 30 HOH HOH . C 3 HOH A 68 668 49 HOH HOH . C 3 HOH A 69 669 6 HOH HOH . C 3 HOH A 70 670 1 HOH HOH . C 3 HOH A 71 671 151 HOH HOH . C 3 HOH A 72 672 51 HOH HOH . C 3 HOH A 73 673 71 HOH HOH . C 3 HOH A 74 674 122 HOH HOH . C 3 HOH A 75 675 10 HOH HOH . C 3 HOH A 76 676 80 HOH HOH . C 3 HOH A 77 677 103 HOH HOH . C 3 HOH A 78 678 84 HOH HOH . C 3 HOH A 79 679 106 HOH HOH . C 3 HOH A 80 680 25 HOH HOH . C 3 HOH A 81 681 67 HOH HOH . C 3 HOH A 82 682 58 HOH HOH . C 3 HOH A 83 683 31 HOH HOH . C 3 HOH A 84 684 69 HOH HOH . C 3 HOH A 85 685 82 HOH HOH . C 3 HOH A 86 686 57 HOH HOH . C 3 HOH A 87 687 75 HOH HOH . C 3 HOH A 88 688 2 HOH HOH . C 3 HOH A 89 689 102 HOH HOH . C 3 HOH A 90 690 87 HOH HOH . C 3 HOH A 91 691 78 HOH HOH . C 3 HOH A 92 692 120 HOH HOH . C 3 HOH A 93 693 129 HOH HOH . C 3 HOH A 94 694 39 HOH HOH . C 3 HOH A 95 695 101 HOH HOH . C 3 HOH A 96 696 136 HOH HOH . C 3 HOH A 97 697 32 HOH HOH . C 3 HOH A 98 698 91 HOH HOH . C 3 HOH A 99 699 54 HOH HOH . C 3 HOH A 100 700 17 HOH HOH . C 3 HOH A 101 701 63 HOH HOH . C 3 HOH A 102 702 28 HOH HOH . C 3 HOH A 103 703 86 HOH HOH . C 3 HOH A 104 704 98 HOH HOH . C 3 HOH A 105 705 132 HOH HOH . C 3 HOH A 106 706 35 HOH HOH . C 3 HOH A 107 707 134 HOH HOH . C 3 HOH A 108 708 93 HOH HOH . C 3 HOH A 109 709 56 HOH HOH . C 3 HOH A 110 710 60 HOH HOH . C 3 HOH A 111 711 112 HOH HOH . C 3 HOH A 112 712 5 HOH HOH . C 3 HOH A 113 713 157 HOH HOH . C 3 HOH A 114 714 40 HOH HOH . C 3 HOH A 115 715 149 HOH HOH . C 3 HOH A 116 716 88 HOH HOH . C 3 HOH A 117 717 152 HOH HOH . C 3 HOH A 118 718 143 HOH HOH . C 3 HOH A 119 719 9 HOH HOH . C 3 HOH A 120 720 90 HOH HOH . C 3 HOH A 121 721 145 HOH HOH . C 3 HOH A 122 722 159 HOH HOH . C 3 HOH A 123 723 79 HOH HOH . C 3 HOH A 124 724 158 HOH HOH . C 3 HOH A 125 725 124 HOH HOH . C 3 HOH A 126 726 117 HOH HOH . C 3 HOH A 127 727 107 HOH HOH . C 3 HOH A 128 728 165 HOH HOH . C 3 HOH A 129 729 44 HOH HOH . C 3 HOH A 130 730 66 HOH HOH . C 3 HOH A 131 731 123 HOH HOH . C 3 HOH A 132 732 125 HOH HOH . C 3 HOH A 133 733 109 HOH HOH . C 3 HOH A 134 734 118 HOH HOH . C 3 HOH A 135 735 41 HOH HOH . C 3 HOH A 136 736 115 HOH HOH . C 3 HOH A 137 737 138 HOH HOH . C 3 HOH A 138 738 7 HOH HOH . C 3 HOH A 139 739 140 HOH HOH . C 3 HOH A 140 740 137 HOH HOH . C 3 HOH A 141 741 74 HOH HOH . C 3 HOH A 142 742 139 HOH HOH . C 3 HOH A 143 743 170 HOH HOH . C 3 HOH A 144 744 116 HOH HOH . C 3 HOH A 145 745 133 HOH HOH . C 3 HOH A 146 746 43 HOH HOH . C 3 HOH A 147 747 161 HOH HOH . C 3 HOH A 148 748 146 HOH HOH . C 3 HOH A 149 749 130 HOH HOH . C 3 HOH A 150 750 147 HOH HOH . C 3 HOH A 151 751 96 HOH HOH . C 3 HOH A 152 752 154 HOH HOH . C 3 HOH A 153 753 141 HOH HOH . C 3 HOH A 154 754 53 HOH HOH . C 3 HOH A 155 755 114 HOH HOH . C 3 HOH A 156 756 113 HOH HOH . C 3 HOH A 157 757 119 HOH HOH . C 3 HOH A 158 758 37 HOH HOH . C 3 HOH A 159 759 76 HOH HOH . C 3 HOH A 160 760 62 HOH HOH . C 3 HOH A 161 761 13 HOH HOH . C 3 HOH A 162 762 108 HOH HOH . C 3 HOH A 163 763 73 HOH HOH . C 3 HOH A 164 764 131 HOH HOH . C 3 HOH A 165 765 156 HOH HOH . C 3 HOH A 166 766 160 HOH HOH . C 3 HOH A 167 767 164 HOH HOH . C 3 HOH A 168 768 153 HOH HOH . C 3 HOH A 169 769 126 HOH HOH . C 3 HOH A 170 770 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 21G . . . B 2 -3.803 9.475 -0.656 1 13.77 ? C1 21G 501 A 1 HETATM 2 C C2 21G . . . B 2 -3.751 8.398 0.225 1 13.82 ? C2 21G 501 A 1 HETATM 3 C C3 21G . . . B 2 -4.802 7.497 0.265 1 14.44 ? C3 21G 501 A 1 HETATM 4 C C5 21G . . . B 2 -5.891 8.624 -1.441 1 13.2 ? C5 21G 501 A 1 HETATM 5 C C6 21G . . . B 2 -4.896 9.573 -1.513 1 13.35 ? C6 21G 501 A 1 HETATM 6 C C7 21G . . . B 2 -5.26 10.45 -2.514 1 13.77 ? C7 21G 501 A 1 HETATM 7 N N4 21G . . . B 2 -5.848 7.641 -0.542 1 13.48 ? N4 21G 501 A 1 HETATM 8 C C8 21G . . . B 2 -6.487 10.062 -2.997 1 14.24 ? C8 21G 501 A 1 HETATM 9 N N9 21G . . . B 2 -6.869 8.966 -2.309 1 14.35 ? N9 21G 501 A 1 HETATM 10 C C11 21G . . . B 2 -4.556 11.554 -3.015 1 14.97 ? C11 21G 501 A 1 HETATM 11 N N12 21G . . . B 2 -5.108 12.28 -4.001 1 15.82 ? N12 21G 501 A 1 HETATM 12 C C13 21G . . . B 2 -4.396 13.33 -4.506 1 19.46 ? C13 21G 501 A 1 HETATM 13 C C14 21G . . . B 2 -3.168 13.679 -3.942 1 18.89 ? C14 21G 501 A 1 HETATM 14 C C15 21G . . . B 2 -2.654 12.905 -2.893 1 16.35 ? C15 21G 501 A 1 HETATM 15 N N16 21G . . . B 2 -3.367 11.862 -2.454 1 15.31 ? N16 21G 501 A 1 HETATM 16 N N17 21G . . . B 2 -1.464 13.203 -2.301 1 16.79 ? N17 21G 501 A 1 HETATM 17 C C18 21G . . . B 2 -0.922 12.516 -1.126 1 17.08 ? C18 21G 501 A 1 HETATM 18 C C20 21G . . . B 2 0.12 13.38 -0.378 1 19.55 ? C20 21G 501 A 1 HETATM 19 C C22 21G . . . B 2 1.35 12.569 -0.093 1 17.82 ? C22 21G 501 A 1 HETATM 20 C C23 21G . . . B 2 2.008 12.351 -1.435 1 17.35 ? C23 21G 501 A 1 HETATM 21 C C24 21G . . . B 2 1.063 11.575 -2.365 1 17.07 ? C24 21G 501 A 1 HETATM 22 C C25 21G . . . B 2 -0.242 11.233 -1.59 1 17.04 ? C25 21G 501 A 1 HETATM 23 C C26 21G . . . B 2 0.129 10.385 -0.386 1 16.37 ? C26 21G 501 A 1 HETATM 24 C C27 21G . . . B 2 0.954 11.233 0.591 1 17.25 ? C27 21G 501 A 1 HETATM 25 C C28 21G . . . B 2 -0.381 13.916 0.944 1 23.5 ? C28 21G 501 A 1 HETATM 26 O O29 21G . . . B 2 -1.374 13.475 1.496 1 27.99 ? O29 21G 501 A 1 HETATM 27 O O30 21G . . . B 2 0.302 14.886 1.535 1 28.55 ? O30 21G 501 A 1 HETATM 28 F F31 21G . . . B 2 -2.455 14.763 -4.42 1 22.99 ? F31 21G 501 A 1 HETATM 29 F F32 21G . . . B 2 -2.741 8.256 1.111 1 13.49 ? F32 21G 501 A 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 29 #