data_7AS3 # _model_server_result.job_id -4qgoSYsUYUSM_mPTO_hKw _model_server_result.datetime_utc '2024-11-16 16:00:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7as3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7AS3 # _exptl.entry_id 7AS3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 399.394 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S,3S)-3-[[5-fluoranyl-2-(5-fluoranyl-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7AS3 _cell.length_a 64.807 _cell.length_b 64.807 _cell.length_c 75.634 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AS3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C20 H19 F2 N5 O2' _chem_comp.formula_weight 399.394 _chem_comp.id 21G _chem_comp.mon_nstd_flag . _chem_comp.name '(2S,3S)-3-[[5-fluoranyl-2-(5-fluoranyl-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '3-[[5-fluoro-2-(5-fluoro-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid;VX787;(2S,3S)-3-((5-fluoro-2-(5-fluoro-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl)amino)bicyclo[2.2.2]octane-2-carboxylic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N9 C5 21G sing 1 n y N9 C8 21G sing 2 n y N4 C5 21G sing 3 n y N4 C3 21G doub 4 n y C5 C6 21G doub 5 n y C8 C7 21G doub 6 n y C3 C2 21G sing 7 n y C6 C7 21G sing 8 n y C6 C1 21G sing 9 n y C7 C11 21G sing 10 n n C2 C1 21G doub 11 n y C2 F32 21G sing 12 n n N12 C11 21G doub 13 n y N12 C13 21G sing 14 n y C11 N16 21G sing 15 n y C13 C14 21G doub 16 n y N16 C15 21G doub 17 n y C15 C14 21G sing 18 n y C15 N17 21G sing 19 n n C14 F31 21G sing 20 n n O30 C28 21G doub 21 n n N17 C18 21G sing 22 n n C18 C25 21G sing 23 n n C18 C20 21G sing 24 n n C28 O29 21G sing 25 n n C28 C20 21G sing 26 n n C24 C25 21G sing 27 n n C24 C23 21G sing 28 n n C25 C26 21G sing 29 n n C20 C22 21G sing 30 n n C23 C22 21G sing 31 n n C26 C27 21G sing 32 n n C22 C27 21G sing 33 n n C1 H1 21G sing 34 n n C3 H2 21G sing 35 n n C8 H3 21G sing 36 n n N9 H4 21G sing 37 n n C13 H5 21G sing 38 n n N17 H6 21G sing 39 n n C18 H7 21G sing 40 n n C20 H8 21G sing 41 n n C22 H9 21G sing 42 n n C23 H10 21G sing 43 n n C23 H11 21G sing 44 n n C24 H12 21G sing 45 n n C24 H13 21G sing 46 n n C25 H14 21G sing 47 n n C26 H15 21G sing 48 n n C26 H16 21G sing 49 n n C27 H17 21G sing 50 n n C27 H18 21G sing 51 n n O29 H19 21G sing 52 n n # _atom_sites.entry_id 7AS3 _atom_sites.fract_transf_matrix[1][1] 0.01543 _atom_sites.fract_transf_matrix[1][2] 0.008909 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017818 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013222 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 21G A 1 501 1 21G 21G . C 2 21G A 1 502 2 21G 21G . D 3 HOH A 1 601 175 HOH HOH . D 3 HOH A 2 602 174 HOH HOH . D 3 HOH A 3 603 207 HOH HOH . D 3 HOH A 4 604 200 HOH HOH . D 3 HOH A 5 605 208 HOH HOH . D 3 HOH A 6 606 7 HOH HOH . D 3 HOH A 7 607 83 HOH HOH . D 3 HOH A 8 608 41 HOH HOH . D 3 HOH A 9 609 137 HOH HOH . D 3 HOH A 10 610 8 HOH HOH . D 3 HOH A 11 611 124 HOH HOH . D 3 HOH A 12 612 194 HOH HOH . D 3 HOH A 13 613 183 HOH HOH . D 3 HOH A 14 614 33 HOH HOH . D 3 HOH A 15 615 76 HOH HOH . D 3 HOH A 16 616 184 HOH HOH . D 3 HOH A 17 617 67 HOH HOH . D 3 HOH A 18 618 134 HOH HOH . D 3 HOH A 19 619 162 HOH HOH . D 3 HOH A 20 620 54 HOH HOH . D 3 HOH A 21 621 28 HOH HOH . D 3 HOH A 22 622 177 HOH HOH . D 3 HOH A 23 623 44 HOH HOH . D 3 HOH A 24 624 139 HOH HOH . D 3 HOH A 25 625 78 HOH HOH . D 3 HOH A 26 626 176 HOH HOH . D 3 HOH A 27 627 66 HOH HOH . D 3 HOH A 28 628 68 HOH HOH . D 3 HOH A 29 629 131 HOH HOH . D 3 HOH A 30 630 123 HOH HOH . D 3 HOH A 31 631 104 HOH HOH . D 3 HOH A 32 632 49 HOH HOH . D 3 HOH A 33 633 12 HOH HOH . D 3 HOH A 34 634 15 HOH HOH . D 3 HOH A 35 635 10 HOH HOH . D 3 HOH A 36 636 56 HOH HOH . D 3 HOH A 37 637 31 HOH HOH . D 3 HOH A 38 638 140 HOH HOH . D 3 HOH A 39 639 204 HOH HOH . D 3 HOH A 40 640 18 HOH HOH . D 3 HOH A 41 641 64 HOH HOH . D 3 HOH A 42 642 158 HOH HOH . D 3 HOH A 43 643 189 HOH HOH . D 3 HOH A 44 644 73 HOH HOH . D 3 HOH A 45 645 100 HOH HOH . D 3 HOH A 46 646 148 HOH HOH . D 3 HOH A 47 647 17 HOH HOH . D 3 HOH A 48 648 188 HOH HOH . D 3 HOH A 49 649 205 HOH HOH . D 3 HOH A 50 650 98 HOH HOH . D 3 HOH A 51 651 39 HOH HOH . D 3 HOH A 52 652 1 HOH HOH . D 3 HOH A 53 653 53 HOH HOH . D 3 HOH A 54 654 34 HOH HOH . D 3 HOH A 55 655 52 HOH HOH . D 3 HOH A 56 656 36 HOH HOH . D 3 HOH A 57 657 32 HOH HOH . D 3 HOH A 58 658 4 HOH HOH . D 3 HOH A 59 659 37 HOH HOH . D 3 HOH A 60 660 29 HOH HOH . D 3 HOH A 61 661 156 HOH HOH . D 3 HOH A 62 662 102 HOH HOH . D 3 HOH A 63 663 193 HOH HOH . D 3 HOH A 64 664 11 HOH HOH . D 3 HOH A 65 665 13 HOH HOH . D 3 HOH A 66 666 38 HOH HOH . D 3 HOH A 67 667 46 HOH HOH . D 3 HOH A 68 668 127 HOH HOH . D 3 HOH A 69 669 51 HOH HOH . D 3 HOH A 70 670 23 HOH HOH . D 3 HOH A 71 671 171 HOH HOH . D 3 HOH A 72 672 63 HOH HOH . D 3 HOH A 73 673 128 HOH HOH . D 3 HOH A 74 674 60 HOH HOH . D 3 HOH A 75 675 55 HOH HOH . D 3 HOH A 76 676 117 HOH HOH . D 3 HOH A 77 677 30 HOH HOH . D 3 HOH A 78 678 6 HOH HOH . D 3 HOH A 79 679 112 HOH HOH . D 3 HOH A 80 680 26 HOH HOH . D 3 HOH A 81 681 14 HOH HOH . D 3 HOH A 82 682 82 HOH HOH . D 3 HOH A 83 683 122 HOH HOH . D 3 HOH A 84 684 173 HOH HOH . D 3 HOH A 85 685 136 HOH HOH . D 3 HOH A 86 686 121 HOH HOH . D 3 HOH A 87 687 35 HOH HOH . D 3 HOH A 88 688 84 HOH HOH . D 3 HOH A 89 689 88 HOH HOH . D 3 HOH A 90 690 81 HOH HOH . D 3 HOH A 91 691 16 HOH HOH . D 3 HOH A 92 692 114 HOH HOH . D 3 HOH A 93 693 91 HOH HOH . D 3 HOH A 94 694 109 HOH HOH . D 3 HOH A 95 695 25 HOH HOH . D 3 HOH A 96 696 90 HOH HOH . D 3 HOH A 97 697 48 HOH HOH . D 3 HOH A 98 698 132 HOH HOH . D 3 HOH A 99 699 65 HOH HOH . D 3 HOH A 100 700 178 HOH HOH . D 3 HOH A 101 701 143 HOH HOH . D 3 HOH A 102 702 199 HOH HOH . D 3 HOH A 103 703 87 HOH HOH . D 3 HOH A 104 704 181 HOH HOH . D 3 HOH A 105 705 130 HOH HOH . D 3 HOH A 106 706 58 HOH HOH . D 3 HOH A 107 707 42 HOH HOH . D 3 HOH A 108 708 116 HOH HOH . D 3 HOH A 109 709 22 HOH HOH . D 3 HOH A 110 710 70 HOH HOH . D 3 HOH A 111 711 157 HOH HOH . D 3 HOH A 112 712 27 HOH HOH . D 3 HOH A 113 713 21 HOH HOH . D 3 HOH A 114 714 93 HOH HOH . D 3 HOH A 115 715 126 HOH HOH . D 3 HOH A 116 716 197 HOH HOH . D 3 HOH A 117 717 62 HOH HOH . D 3 HOH A 118 718 125 HOH HOH . D 3 HOH A 119 719 74 HOH HOH . D 3 HOH A 120 720 9 HOH HOH . D 3 HOH A 121 721 69 HOH HOH . D 3 HOH A 122 722 170 HOH HOH . D 3 HOH A 123 723 106 HOH HOH . D 3 HOH A 124 724 3 HOH HOH . D 3 HOH A 125 725 19 HOH HOH . D 3 HOH A 126 726 141 HOH HOH . D 3 HOH A 127 727 20 HOH HOH . D 3 HOH A 128 728 192 HOH HOH . D 3 HOH A 129 729 59 HOH HOH . D 3 HOH A 130 730 77 HOH HOH . D 3 HOH A 131 731 103 HOH HOH . D 3 HOH A 132 732 57 HOH HOH . D 3 HOH A 133 733 138 HOH HOH . D 3 HOH A 134 734 75 HOH HOH . D 3 HOH A 135 735 5 HOH HOH . D 3 HOH A 136 736 119 HOH HOH . D 3 HOH A 137 737 94 HOH HOH . D 3 HOH A 138 738 71 HOH HOH . D 3 HOH A 139 739 43 HOH HOH . D 3 HOH A 140 740 72 HOH HOH . D 3 HOH A 141 741 105 HOH HOH . D 3 HOH A 142 742 24 HOH HOH . D 3 HOH A 143 743 191 HOH HOH . D 3 HOH A 144 744 144 HOH HOH . D 3 HOH A 145 745 80 HOH HOH . D 3 HOH A 146 746 95 HOH HOH . D 3 HOH A 147 747 50 HOH HOH . D 3 HOH A 148 748 115 HOH HOH . D 3 HOH A 149 749 198 HOH HOH . D 3 HOH A 150 750 2 HOH HOH . D 3 HOH A 151 751 86 HOH HOH . D 3 HOH A 152 752 185 HOH HOH . D 3 HOH A 153 753 47 HOH HOH . D 3 HOH A 154 754 187 HOH HOH . D 3 HOH A 155 755 97 HOH HOH . D 3 HOH A 156 756 99 HOH HOH . D 3 HOH A 157 757 165 HOH HOH . D 3 HOH A 158 758 45 HOH HOH . D 3 HOH A 159 759 167 HOH HOH . D 3 HOH A 160 760 202 HOH HOH . D 3 HOH A 161 761 146 HOH HOH . D 3 HOH A 162 762 120 HOH HOH . D 3 HOH A 163 763 142 HOH HOH . D 3 HOH A 164 764 153 HOH HOH . D 3 HOH A 165 765 159 HOH HOH . D 3 HOH A 166 766 147 HOH HOH . D 3 HOH A 167 767 108 HOH HOH . D 3 HOH A 168 768 149 HOH HOH . D 3 HOH A 169 769 164 HOH HOH . D 3 HOH A 170 770 163 HOH HOH . D 3 HOH A 171 771 79 HOH HOH . D 3 HOH A 172 772 154 HOH HOH . D 3 HOH A 173 773 145 HOH HOH . D 3 HOH A 174 774 107 HOH HOH . D 3 HOH A 175 775 201 HOH HOH . D 3 HOH A 176 776 161 HOH HOH . D 3 HOH A 177 777 186 HOH HOH . D 3 HOH A 178 778 151 HOH HOH . D 3 HOH A 179 779 160 HOH HOH . D 3 HOH A 180 780 61 HOH HOH . D 3 HOH A 181 781 118 HOH HOH . D 3 HOH A 182 782 168 HOH HOH . D 3 HOH A 183 783 172 HOH HOH . D 3 HOH A 184 784 85 HOH HOH . D 3 HOH A 185 785 152 HOH HOH . D 3 HOH A 186 786 195 HOH HOH . D 3 HOH A 187 787 206 HOH HOH . D 3 HOH A 188 788 179 HOH HOH . D 3 HOH A 189 789 89 HOH HOH . D 3 HOH A 190 790 135 HOH HOH . D 3 HOH A 191 791 182 HOH HOH . D 3 HOH A 192 792 196 HOH HOH . D 3 HOH A 193 793 96 HOH HOH . D 3 HOH A 194 794 150 HOH HOH . D 3 HOH A 195 795 110 HOH HOH . D 3 HOH A 196 796 40 HOH HOH . D 3 HOH A 197 797 166 HOH HOH . D 3 HOH A 198 798 111 HOH HOH . D 3 HOH A 199 799 190 HOH HOH . D 3 HOH A 200 800 133 HOH HOH . D 3 HOH A 201 801 92 HOH HOH . D 3 HOH A 202 802 155 HOH HOH . D 3 HOH A 203 803 203 HOH HOH . D 3 HOH A 204 804 180 HOH HOH . D 3 HOH A 205 805 169 HOH HOH . D 3 HOH A 206 806 129 HOH HOH . D 3 HOH A 207 807 101 HOH HOH . D 3 HOH A 208 808 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 21G . . . C 2 -31.825 17.293 9.331 1 20.91 ? C1 21G 502 A 1 HETATM 2 C C2 21G . . . C 2 -32.083 16.47 8.271 1 23.02 ? C2 21G 502 A 1 HETATM 3 C C3 21G . . . C 2 -31.794 16.857 6.976 1 20 ? C3 21G 502 A 1 HETATM 4 C C5 21G . . . C 2 -30.995 18.848 7.706 1 20.48 ? C5 21G 502 A 1 HETATM 5 C C6 21G . . . C 2 -31.266 18.547 9.059 1 19.11 ? C6 21G 502 A 1 HETATM 6 C C7 21G . . . C 2 -30.869 19.697 9.827 1 20.76 ? C7 21G 502 A 1 HETATM 7 N N4 21G . . . C 2 -31.251 18.043 6.661 1 19.25 ? N4 21G 502 A 1 HETATM 8 C C8 21G . . . C 2 -30.413 20.611 8.931 1 20.07 ? C8 21G 502 A 1 HETATM 9 N N9 21G . . . C 2 -30.473 20.109 7.652 1 21.36 ? N9 21G 502 A 1 HETATM 10 C C11 21G . . . C 2 -30.917 19.835 11.291 1 23.09 ? C11 21G 502 A 1 HETATM 11 N N12 21G . . . C 2 -30.269 20.863 11.86 1 25.43 ? N12 21G 502 A 1 HETATM 12 C C13 21G . . . C 2 -30.269 20.971 13.204 1 24 ? C13 21G 502 A 1 HETATM 13 C C14 21G . . . C 2 -30.884 20.04 13.995 1 25.7 ? C14 21G 502 A 1 HETATM 14 C C15 21G . . . C 2 -31.479 18.943 13.337 1 24.12 ? C15 21G 502 A 1 HETATM 15 N N16 21G . . . C 2 -31.485 18.869 11.997 1 22.64 ? N16 21G 502 A 1 HETATM 16 N N17 21G . . . C 2 -32.087 18.009 14.075 1 25.22 ? N17 21G 502 A 1 HETATM 17 C C18 21G . . . C 2 -32.681 16.827 13.465 1 25.1 ? C18 21G 502 A 1 HETATM 18 C C20 21G . . . C 2 -33.893 16.34 14.256 1 28.31 ? C20 21G 502 A 1 HETATM 19 C C22 21G . . . C 2 -33.78 14.814 14.435 1 27.09 ? C22 21G 502 A 1 HETATM 20 C C23 21G . . . C 2 -33.59 14.136 13.074 1 25.58 ? C23 21G 502 A 1 HETATM 21 C C24 21G . . . C 2 -32.255 14.583 12.44 1 23.79 ? C24 21G 502 A 1 HETATM 22 C C25 21G . . . C 2 -31.646 15.696 13.327 1 24.68 ? C25 21G 502 A 1 HETATM 23 C C26 21G . . . C 2 -31.305 15.118 14.714 1 24.02 ? C26 21G 502 A 1 HETATM 24 C C27 21G . . . C 2 -32.565 14.455 15.299 1 26.31 ? C27 21G 502 A 1 HETATM 25 C C28 21G . . . C 2 -35.256 16.717 13.639 1 36.34 ? C28 21G 502 A 1 HETATM 26 O O29 21G . . . C 2 -36.233 16.377 14.237 1 42.48 ? O29 21G 502 A 1 HETATM 27 O O30 21G . . . C 2 -35.291 17.237 12.554 1 41.64 ? O30 21G 502 A 1 HETATM 28 F F31 21G . . . C 2 -30.889 20.104 15.352 1 29.33 ? F31 21G 502 A 1 HETATM 29 F F32 21G . . . C 2 -32.616 15.25 8.511 0.91 22.43 ? F32 21G 502 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 29 #