data_7ATN # _model_server_result.job_id OEKKpXicSEPOBvTQtyw0lQ _model_server_result.datetime_utc '2024-12-21 14:14:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7atn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 7ATN # _exptl.entry_id 7ATN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 127.092 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DINUCLEAR COPPER ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ATN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ATN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A O GLU 56 A GLU 56 1_555 H CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc2 A OE1 GLU 56 A GLU 56 1_555 H CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc3 A O HIS 59 A HIS 59 1_555 H CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc4 A O GLY 61 A GLY 61 1_555 H CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc5 A OE1 GLN 63 A GLN 63 1_555 H CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc6 A NE2 HIS 94 A HIS 94 1_555 F FE HEA . A HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc7 A ND1 HIS 276 A HIS 276 1_555 G CU CU . A CU 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? metalc ? metalc8 A NE2 HIS 325 A HIS 325 1_555 G CU CU . A CU 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc9 A NE2 HIS 326 A HIS 326 1_555 G CU CU . A CU 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc10 A NE2 HIS 403 A HIS 403 1_555 E MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc11 A OD2 ASP 404 A ASP 404 1_555 E MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc12 A NE2 HIS 411 A HIS 411 1_555 I FE HEA . A HEA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc13 A NE2 HIS 413 A HIS 413 1_555 F FE HEA . A HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc14 E MN MN . A MN 601 1_555 L O HOH . A HOH 748 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc15 H CA CA . A CA 604 1_555 L O HOH . A HOH 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.015 ? metalc ? metalc16 B ND1 HIS 210 B HIS 181 1_555 J CU2 CUA . B CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc17 B O GLU 247 B GLU 218 1_555 J CU1 CUA . B CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc18 B ND1 HIS 253 B HIS 224 1_555 J CU1 CUA . B CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc19 B SD MET 256 B MET 227 1_555 J CU2 CUA . B CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? # _chem_comp.formula Cu2 _chem_comp.formula_weight 127.092 _chem_comp.id CUA _chem_comp.mon_nstd_flag . _chem_comp.name 'DINUCLEAR COPPER ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 CU1 _chem_comp_bond.atom_id_2 CU2 _chem_comp_bond.comp_id CUA _chem_comp_bond.value_order sing _chem_comp_bond.pdbx_ordinal 70 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 7ATN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MN A 1 601 2 MN MN . F 6 HEA A 1 602 3 HEA HEA . G 7 CU A 1 603 5 CU CU . H 8 CA A 1 604 6 CA CA . I 6 HEA A 1 605 8 HEA HEA . J 9 CUA B 1 301 1 CUA CUA . K 10 PC1 C 1 301 7 PC1 PC1 . L 11 HOH A 1 701 8 HOH HOH . L 11 HOH A 2 702 67 HOH HOH . L 11 HOH A 3 703 14 HOH HOH . L 11 HOH A 4 704 83 HOH HOH . L 11 HOH A 5 705 68 HOH HOH . L 11 HOH A 6 706 82 HOH HOH . L 11 HOH A 7 707 3 HOH HOH . L 11 HOH A 8 708 44 HOH HOH . L 11 HOH A 9 709 60 HOH HOH . L 11 HOH A 10 710 23 HOH HOH . L 11 HOH A 11 711 25 HOH HOH . L 11 HOH A 12 712 4 HOH HOH . L 11 HOH A 13 713 29 HOH HOH . L 11 HOH A 14 714 73 HOH HOH . L 11 HOH A 15 715 52 HOH HOH . L 11 HOH A 16 716 28 HOH HOH . L 11 HOH A 17 717 26 HOH HOH . L 11 HOH A 18 718 71 HOH HOH . L 11 HOH A 19 719 2 HOH HOH . L 11 HOH A 20 720 1 HOH HOH . L 11 HOH A 21 721 78 HOH HOH . L 11 HOH A 22 722 7 HOH HOH . L 11 HOH A 23 723 21 HOH HOH . L 11 HOH A 24 724 13 HOH HOH . L 11 HOH A 25 725 15 HOH HOH . L 11 HOH A 26 726 81 HOH HOH . L 11 HOH A 27 727 55 HOH HOH . L 11 HOH A 28 728 43 HOH HOH . L 11 HOH A 29 729 27 HOH HOH . L 11 HOH A 30 730 69 HOH HOH . L 11 HOH A 31 731 77 HOH HOH . L 11 HOH A 32 732 35 HOH HOH . L 11 HOH A 33 733 36 HOH HOH . L 11 HOH A 34 734 63 HOH HOH . L 11 HOH A 35 735 24 HOH HOH . L 11 HOH A 36 736 57 HOH HOH . L 11 HOH A 37 737 51 HOH HOH . L 11 HOH A 38 738 80 HOH HOH . L 11 HOH A 39 739 9 HOH HOH . L 11 HOH A 40 740 66 HOH HOH . L 11 HOH A 41 741 70 HOH HOH . L 11 HOH A 42 742 75 HOH HOH . L 11 HOH A 43 743 72 HOH HOH . L 11 HOH A 44 744 62 HOH HOH . L 11 HOH A 45 745 61 HOH HOH . L 11 HOH A 46 746 74 HOH HOH . L 11 HOH A 47 747 50 HOH HOH . L 11 HOH A 48 748 22 HOH HOH . M 11 HOH B 1 401 32 HOH HOH . M 11 HOH B 2 402 6 HOH HOH . M 11 HOH B 3 403 46 HOH HOH . M 11 HOH B 4 404 53 HOH HOH . M 11 HOH B 5 405 30 HOH HOH . M 11 HOH B 6 406 64 HOH HOH . M 11 HOH B 7 407 49 HOH HOH . M 11 HOH B 8 408 17 HOH HOH . M 11 HOH B 9 409 42 HOH HOH . M 11 HOH B 10 410 47 HOH HOH . M 11 HOH B 11 411 48 HOH HOH . M 11 HOH B 12 412 45 HOH HOH . M 11 HOH B 13 413 38 HOH HOH . M 11 HOH B 14 414 11 HOH HOH . M 11 HOH B 15 415 39 HOH HOH . M 11 HOH B 16 416 56 HOH HOH . M 11 HOH B 17 417 54 HOH HOH . M 11 HOH B 18 418 34 HOH HOH . M 11 HOH B 19 419 40 HOH HOH . M 11 HOH B 20 420 19 HOH HOH . M 11 HOH B 21 421 58 HOH HOH . M 11 HOH B 22 422 33 HOH HOH . M 11 HOH B 23 423 76 HOH HOH . M 11 HOH B 24 424 31 HOH HOH . M 11 HOH B 25 425 5 HOH HOH . M 11 HOH B 26 426 20 HOH HOH . M 11 HOH B 27 427 37 HOH HOH . N 11 HOH C 1 401 59 HOH HOH . N 11 HOH C 2 402 12 HOH HOH . N 11 HOH C 3 403 65 HOH HOH . N 11 HOH C 4 404 10 HOH HOH . N 11 HOH C 5 405 18 HOH HOH . N 11 HOH C 6 406 41 HOH HOH . N 11 HOH C 7 407 79 HOH HOH . O 11 HOH D 1 101 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CU CU1 CUA . . . J 9 114.605 117.659 127.964 1 41.57 ? CU1 CUA 301 B 1 HETATM 2 CU CU2 CUA . . . J 9 115.498 120.244 128.246 1 41.57 ? CU2 CUA 301 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 2 #