data_7ATU
#
_model_server_result.job_id            3vNJ3iZZszUnrRooDscgJA 
_model_server_result.datetime_utc      '2024-10-10 23:30:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7atu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":701}' 
#
_entry.id    7ATU 
#
_exptl.entry_id    7ATU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              479.916 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (S)-2-benzyl-6-(8-chloro-5-methyl-4-oxo-2,3,4,5-tetrahydrobenzo[b][1,4]oxazepin-3-yl)-7-oxo-4,5,6,7-tetrahydro-2H-pyrazolo[3,4-c]pyridine-3-carboxamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.339 
_cell.angle_gamma         90 
_cell.entry_id            7ATU 
_cell.length_a            85.234 
_cell.length_b            83.838 
_cell.length_c            98.029 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ATU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
'gel filtration' monomer 1 author_defined_assembly 1 
'gel filtration' monomer 1 author_defined_assembly 2 
'gel filtration' monomer 1 author_defined_assembly 3 
'gel filtration' monomer 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,I 1 1 
B,F,J 2 1 
C,G 3 1 
D,H 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C24 H22 Cl N5 O4' 
_chem_comp.formula_weight    479.916 
_chem_comp.id                RXN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (S)-2-benzyl-6-(8-chloro-5-methyl-4-oxo-2,3,4,5-tetrahydrobenzo[b][1,4]oxazepin-3-yl)-7-oxo-4,5,6,7-tetrahydro-2H-pyrazolo[3,4-c]pyridine-3-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     6-[(3S)-8-chloranyl-5-methyl-4-oxidanylidene-2,3-dihydro-1,5-benzoxazepin-3-yl]-7-oxidanylidene-2-(phenylmethyl)-4,5-dihydropyrazolo[3,4-c]pyridine-3-carboxamide;LIJTF500025 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C17 C16 RXN doub 277 n y 
C17 C18 RXN sing 278 n y 
C16 C15 RXN sing 279 n y 
C18 C19 RXN doub 280 n y 
C15 C14 RXN doub 281 n y 
C19 C14 RXN sing 282 n y 
C14 C13 RXN sing 283 n n 
C13 N3 RXN sing 284 n n 
O1 C21 RXN doub 285 n n 
N3 C20 RXN sing 286 n y 
N3 N2 RXN sing 287 n y 
C21 C20 RXN sing 288 n n 
C21 N4 RXN sing 289 n n 
C20 C11 RXN doub 290 n y 
N2 C12 RXN doub 291 n y 
C11 C12 RXN sing 292 n y 
C11 C10 RXN sing 293 n n 
C12 C22 RXN sing 294 n n 
C10 C9 RXN sing 295 n n 
C9 N1 RXN sing 296 n n 
C22 O2 RXN doub 297 n n 
C22 N1 RXN sing 298 n n 
N1 C8 RXN sing 299 n n 
C7 C8 RXN sing 300 n n 
C7 O RXN sing 301 n n 
C8 C23 RXN sing 302 n n 
O C6 RXN sing 303 n n 
O3 C23 RXN doub 304 n n 
C23 N RXN sing 305 n n 
C5 C6 RXN doub 306 n y 
C5 C4 RXN sing 307 n y 
C6 C1 RXN sing 308 n y 
C4 CL RXN sing 309 n n 
C4 C3 RXN doub 310 n y 
C1 N RXN sing 311 n n 
C1 C2 RXN doub 312 n y 
N C RXN sing 313 n n 
C3 C2 RXN sing 314 n y 
C2 H1 RXN sing 315 n n 
C3 H2 RXN sing 316 n n 
C5 H3 RXN sing 317 n n 
C7 H4 RXN sing 318 n n 
C7 H5 RXN sing 319 n n 
C8 H6 RXN sing 320 n n 
C9 H7 RXN sing 321 n n 
C9 H8 RXN sing 322 n n 
C10 H9 RXN sing 323 n n 
C10 H10 RXN sing 324 n n 
C13 H11 RXN sing 325 n n 
C13 H12 RXN sing 326 n n 
C15 H13 RXN sing 327 n n 
C16 H14 RXN sing 328 n n 
C17 H15 RXN sing 329 n n 
C18 H16 RXN sing 330 n n 
C H17 RXN sing 331 n n 
C H18 RXN sing 332 n n 
C H19 RXN sing 333 n n 
C19 H20 RXN sing 334 n n 
N4 H21 RXN sing 335 n n 
N4 H22 RXN sing 336 n n 
#
_atom_sites.entry_id                     7ATU 
_atom_sites.fract_transf_matrix[1][1]    0.011732 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000479 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011928 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01021 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 RXN A 1 701 1 RXN T25 . 
F 2 RXN B 1 701 2 RXN T25 . 
G 2 RXN C 1 701 4 RXN T25 . 
H 2 RXN D 1 701 3 RXN T25 . 
I 3 HOH A 1 801 5 HOH HOH . 
I 3 HOH A 2 802 3 HOH HOH . 
I 3 HOH A 3 803 1 HOH HOH . 
J 3 HOH B 1 801 4 HOH HOH . 
J 3 HOH B 2 802 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 RXN . . . E 2 -38.152 -25.373 1.047 1 44.86 ? O1 RXN 701 A 1 
HETATM 2 C C1 RXN . . . E 2 -41.964 -18.62 6.907 1 43.19 ? C1 RXN 701 A 1 
HETATM 3 O O2 RXN . . . E 2 -38.971 -19.107 3.416 1 45.11 ? O2 RXN 701 A 1 
HETATM 4 C C2 RXN . . . E 2 -41.424 -17.804 7.895 1 42.49 ? C2 RXN 701 A 1 
HETATM 5 C C3 RXN . . . E 2 -41.691 -16.444 7.878 1 41.4 ? C3 RXN 701 A 1 
HETATM 6 C C4 RXN . . . E 2 -42.475 -15.92 6.868 1 44.89 ? C4 RXN 701 A 1 
HETATM 7 C C5 RXN . . . E 2 -42.953 -16.703 5.84 1 42.05 ? C5 RXN 701 A 1 
HETATM 8 C C6 RXN . . . E 2 -42.735 -18.062 5.893 1 43.49 ? C6 RXN 701 A 1 
HETATM 9 C C7 RXN . . . E 2 -42.568 -19.376 3.956 1 40.63 ? C7 RXN 701 A 1 
HETATM 10 C C8 RXN . . . E 2 -41.301 -19.993 4.537 1 39.08 ? C8 RXN 701 A 1 
HETATM 11 C C9 RXN . . . E 2 -41.181 -21.932 2.969 1 40.25 ? C9 RXN 701 A 1 
HETATM 12 C C10 RXN . . . E 2 -40.178 -23.072 2.842 1 41.09 ? C10 RXN 701 A 1 
HETATM 13 C C11 RXN . . . E 2 -38.855 -22.512 2.405 1 38.31 ? C11 RXN 701 A 1 
HETATM 14 C C12 RXN . . . E 2 -38.514 -21.164 2.474 1 37.93 ? C12 RXN 701 A 1 
HETATM 15 O O3 RXN . . . E 2 -41.786 -21.986 5.804 1 41.5 ? O3 RXN 701 A 1 
HETATM 16 C C13 RXN . . . E 2 -35.658 -22.166 0.678 1 35.54 ? C13 RXN 701 A 1 
HETATM 17 C C14 RXN . . . E 2 -35.906 -21.842 -0.77 1 33.42 ? C14 RXN 701 A 1 
HETATM 18 C C15 RXN . . . E 2 -36.456 -22.783 -1.619 1 35.78 ? C15 RXN 701 A 1 
HETATM 19 C C16 RXN . . . E 2 -36.74 -22.47 -2.939 1 38.35 ? C16 RXN 701 A 1 
HETATM 20 C C17 RXN . . . E 2 -36.473 -21.22 -3.422 1 36.81 ? C17 RXN 701 A 1 
HETATM 21 C C18 RXN . . . E 2 -35.919 -20.274 -2.591 1 42.94 ? C18 RXN 701 A 1 
HETATM 22 N N RXN . . . E 2 -41.739 -20.025 6.937 1 43.12 ? N RXN 701 A 1 
HETATM 23 C C RXN . . . E 2 -41.721 -20.709 8.226 1 42.02 ? C RXN 701 A 1 
HETATM 24 O O RXN . . . E 2 -43.415 -18.832 4.974 1 41.71 ? O RXN 701 A 1 
HETATM 25 C C19 RXN . . . E 2 -35.631 -20.584 -1.272 1 38.86 ? C19 RXN 701 A 1 
HETATM 26 C C20 RXN . . . E 2 -37.752 -23.135 1.777 1 42.37 ? C20 RXN 701 A 1 
HETATM 27 C C21 RXN . . . E 2 -37.403 -24.564 1.606 1 41.14 ? C21 RXN 701 A 1 
HETATM 28 C C22 RXN . . . E 2 -39.343 -20.252 3.174 1 41.96 ? C22 RXN 701 A 1 
HETATM 29 C C23 RXN . . . E 2 -41.603 -20.782 5.807 1 40.76 ? C23 RXN 701 A 1 
HETATM 30 N N1 RXN . . . E 2 -40.549 -20.736 3.542 1 42.41 ? N1 RXN 701 A 1 
HETATM 31 N N2 RXN . . . E 2 -37.336 -20.925 1.889 1 43.72 ? N2 RXN 701 A 1 
HETATM 32 N N3 RXN . . . E 2 -36.891 -22.132 1.459 1 40.16 ? N3 RXN 701 A 1 
HETATM 33 N N4 RXN . . . E 2 -36.25 -24.935 2.147 1 39.32 ? N4 RXN 701 A 1 
HETATM 34 CL CL RXN . . . E 2 -43.054 -14.275 7.004 1 70.5 ? CL RXN 701 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           34 
#