data_7ATU # _model_server_result.job_id Lm0sHU6SQtresCvsZLNwqA _model_server_result.datetime_utc '2024-10-10 23:30:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7atu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":701}' # _entry.id 7ATU # _exptl.entry_id 7ATU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 479.916 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (S)-2-benzyl-6-(8-chloro-5-methyl-4-oxo-2,3,4,5-tetrahydrobenzo[b][1,4]oxazepin-3-yl)-7-oxo-4,5,6,7-tetrahydro-2H-pyrazolo[3,4-c]pyridine-3-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.339 _cell.angle_gamma 90 _cell.entry_id 7ATU _cell.length_a 85.234 _cell.length_b 83.838 _cell.length_c 98.029 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ATU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id 'gel filtration' monomer 1 author_defined_assembly 1 'gel filtration' monomer 1 author_defined_assembly 2 'gel filtration' monomer 1 author_defined_assembly 3 'gel filtration' monomer 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G 3 1 D,H 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C24 H22 Cl N5 O4' _chem_comp.formula_weight 479.916 _chem_comp.id RXN _chem_comp.mon_nstd_flag . _chem_comp.name (S)-2-benzyl-6-(8-chloro-5-methyl-4-oxo-2,3,4,5-tetrahydrobenzo[b][1,4]oxazepin-3-yl)-7-oxo-4,5,6,7-tetrahydro-2H-pyrazolo[3,4-c]pyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 6-[(3S)-8-chloranyl-5-methyl-4-oxidanylidene-2,3-dihydro-1,5-benzoxazepin-3-yl]-7-oxidanylidene-2-(phenylmethyl)-4,5-dihydropyrazolo[3,4-c]pyridine-3-carboxamide;LIJTF500025 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C16 RXN doub 277 n y C17 C18 RXN sing 278 n y C16 C15 RXN sing 279 n y C18 C19 RXN doub 280 n y C15 C14 RXN doub 281 n y C19 C14 RXN sing 282 n y C14 C13 RXN sing 283 n n C13 N3 RXN sing 284 n n O1 C21 RXN doub 285 n n N3 C20 RXN sing 286 n y N3 N2 RXN sing 287 n y C21 C20 RXN sing 288 n n C21 N4 RXN sing 289 n n C20 C11 RXN doub 290 n y N2 C12 RXN doub 291 n y C11 C12 RXN sing 292 n y C11 C10 RXN sing 293 n n C12 C22 RXN sing 294 n n C10 C9 RXN sing 295 n n C9 N1 RXN sing 296 n n C22 O2 RXN doub 297 n n C22 N1 RXN sing 298 n n N1 C8 RXN sing 299 n n C7 C8 RXN sing 300 n n C7 O RXN sing 301 n n C8 C23 RXN sing 302 n n O C6 RXN sing 303 n n O3 C23 RXN doub 304 n n C23 N RXN sing 305 n n C5 C6 RXN doub 306 n y C5 C4 RXN sing 307 n y C6 C1 RXN sing 308 n y C4 CL RXN sing 309 n n C4 C3 RXN doub 310 n y C1 N RXN sing 311 n n C1 C2 RXN doub 312 n y N C RXN sing 313 n n C3 C2 RXN sing 314 n y C2 H1 RXN sing 315 n n C3 H2 RXN sing 316 n n C5 H3 RXN sing 317 n n C7 H4 RXN sing 318 n n C7 H5 RXN sing 319 n n C8 H6 RXN sing 320 n n C9 H7 RXN sing 321 n n C9 H8 RXN sing 322 n n C10 H9 RXN sing 323 n n C10 H10 RXN sing 324 n n C13 H11 RXN sing 325 n n C13 H12 RXN sing 326 n n C15 H13 RXN sing 327 n n C16 H14 RXN sing 328 n n C17 H15 RXN sing 329 n n C18 H16 RXN sing 330 n n C H17 RXN sing 331 n n C H18 RXN sing 332 n n C H19 RXN sing 333 n n C19 H20 RXN sing 334 n n N4 H21 RXN sing 335 n n N4 H22 RXN sing 336 n n # _atom_sites.entry_id 7ATU _atom_sites.fract_transf_matrix[1][1] 0.011732 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000479 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011928 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01021 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 RXN A 1 701 1 RXN T25 . F 2 RXN B 1 701 2 RXN T25 . G 2 RXN C 1 701 4 RXN T25 . H 2 RXN D 1 701 3 RXN T25 . I 3 HOH A 1 801 5 HOH HOH . I 3 HOH A 2 802 3 HOH HOH . I 3 HOH A 3 803 1 HOH HOH . J 3 HOH B 1 801 4 HOH HOH . J 3 HOH B 2 802 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 RXN . . . H 2 -23.196 -60.339 50.035 1 72.42 ? O1 RXN 701 D 1 HETATM 2 C C1 RXN . . . H 2 -29.379 -63.565 57.121 1 70.9 ? C1 RXN 701 D 1 HETATM 3 O O2 RXN . . . H 2 -29.14 -61.138 53.137 1 75.64 ? O2 RXN 701 D 1 HETATM 4 C C2 RXN . . . H 2 -30.184 -62.911 58.043 1 69.01 ? C2 RXN 701 D 1 HETATM 5 C C3 RXN . . . H 2 -31.55 -63.136 58.042 1 74.58 ? C3 RXN 701 D 1 HETATM 6 C C4 RXN . . . H 2 -32.095 -64.003 57.116 1 72.94 ? C4 RXN 701 D 1 HETATM 7 C C5 RXN . . . H 2 -31.314 -64.682 56.205 1 66.67 ? C5 RXN 701 D 1 HETATM 8 C C6 RXN . . . H 2 -29.952 -64.459 56.216 1 73.2 ? C6 RXN 701 D 1 HETATM 9 C C7 RXN . . . H 2 -28.671 -64.427 54.218 1 71.67 ? C7 RXN 701 D 1 HETATM 10 C C8 RXN . . . H 2 -28.056 -63.101 54.655 1 67.16 ? C8 RXN 701 D 1 HETATM 11 C C9 RXN . . . H 2 -26.202 -63.152 52.979 1 69.89 ? C9 RXN 701 D 1 HETATM 12 C C10 RXN . . . H 2 -25.098 -62.16 52.632 1 66.7 ? C10 RXN 701 D 1 HETATM 13 C C11 RXN . . . H 2 -25.697 -60.889 52.102 1 68 ? C11 RXN 701 D 1 HETATM 14 C C12 RXN . . . H 2 -27.038 -60.502 52.283 1 65.67 ? C12 RXN 701 D 1 HETATM 15 O O3 RXN . . . H 2 -26.041 -63.375 55.944 1 73.21 ? O3 RXN 701 D 1 HETATM 16 C C13 RXN . . . H 2 -26.119 -57.783 50.235 1 62.12 ? C13 RXN 701 D 1 HETATM 17 C C14 RXN . . . H 2 -26.548 -58.119 48.827 1 59.17 ? C14 RXN 701 D 1 HETATM 18 C C15 RXN . . . H 2 -25.721 -58.855 47.993 1 56.76 ? C15 RXN 701 D 1 HETATM 19 C C16 RXN . . . H 2 -26.136 -59.208 46.721 1 58.54 ? C16 RXN 701 D 1 HETATM 20 C C17 RXN . . . H 2 -27.38 -58.829 46.267 1 52.36 ? C17 RXN 701 D 1 HETATM 21 C C18 RXN . . . H 2 -28.206 -58.098 47.082 1 54.84 ? C18 RXN 701 D 1 HETATM 22 N N RXN . . . H 2 -27.981 -63.283 57.09 1 67.51 ? N RXN 701 D 1 HETATM 23 C C RXN . . . H 2 -27.289 -63.028 58.347 1 72.76 ? C RXN 701 D 1 HETATM 24 O O RXN . . . H 2 -29.206 -65.183 55.311 1 72.79 ? O RXN 701 D 1 HETATM 25 C C19 RXN . . . H 2 -27.793 -57.739 48.354 1 54.97 ? C19 RXN 701 D 1 HETATM 26 C C20 RXN . . . H 2 -25.12 -59.851 51.338 1 66.98 ? C20 RXN 701 D 1 HETATM 27 C C21 RXN . . . H 2 -23.756 -59.609 50.861 1 65.28 ? C21 RXN 701 D 1 HETATM 28 C C22 RXN . . . H 2 -27.94 -61.369 53.005 1 68.85 ? C22 RXN 701 D 1 HETATM 29 C C23 RXN . . . H 2 -27.248 -63.252 55.941 1 67.53 ? C23 RXN 701 D 1 HETATM 30 N N1 RXN . . . H 2 -27.38 -62.473 53.53 1 65.89 ? N1 RXN 701 D 1 HETATM 31 N N2 RXN . . . H 2 -27.289 -59.33 51.69 1 67.5 ? N2 RXN 701 D 1 HETATM 32 N N3 RXN . . . H 2 -26.117 -58.961 51.103 1 65.48 ? N3 RXN 701 D 1 HETATM 33 N N4 RXN . . . H 2 -23.169 -58.535 51.374 1 67.06 ? N4 RXN 701 D 1 HETATM 34 CL CL RXN . . . H 2 -33.829 -64.192 57.046 1 96.23 ? CL RXN 701 D 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 34 #