data_7AUO # _model_server_result.job_id vBR6Rl3Gywp61SRCijyEkw _model_server_result.datetime_utc '2024-11-15 13:52:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7auo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7AUO # _exptl.entry_id 7AUO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 744.109 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '{[(1R,3S,4S,5R,6S)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl]bis[oxy(2-oxoethane-2,1-diyl)]}bis(phosphonic acid)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7AUO _cell.length_a 61.674 _cell.length_b 61.674 _cell.length_c 89.219 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22 O26 P6' _chem_comp.formula_weight 744.109 _chem_comp.id 4WY _chem_comp.mon_nstd_flag . _chem_comp.name '{[(1R,3S,4S,5R,6S)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl]bis[oxy(2-oxoethane-2,1-diyl)]}bis(phosphonic acid)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O61 PB1 4WY doub 1 n n O71 PB1 4WY sing 2 n n PB1 O51 4WY sing 3 n n PB1 CB1 4WY sing 4 n n O32 PA2 4WY doub 5 n n O42 PA2 4WY sing 6 n n PA2 O22 4WY sing 7 n n PA2 O12 4WY sing 8 n n CB1 CA1 4WY sing 9 n n O12 C2A 4WY sing 10 n n CA1 O11 4WY sing 11 n n CA1 O21 4WY doub 12 n n O11 C1A 4WY sing 13 n n O46 PA6 4WY doub 14 n n C2A C1A 4WY sing 15 n n C2A C3A 4WY sing 16 n n O33 PA3 4WY doub 17 n n O43 PA3 4WY sing 18 n n C1A C6A 4WY sing 19 n n O13 PA3 4WY sing 20 n n O13 C3A 4WY sing 21 n n PA3 O23 4WY sing 22 n n C3A C4A 4WY sing 23 n n PA6 O36 4WY sing 24 n n PA6 O16 4WY sing 25 n n PA6 O26 4WY sing 26 n n C6A O16 4WY sing 27 n n C6A C5A 4WY sing 28 n n C4A C5A 4WY sing 29 n n C4A O14 4WY sing 30 n n C5A O15 4WY sing 31 n n O24 PA4 4WY doub 32 n n O14 PA4 4WY sing 33 n n O15 CA5 4WY sing 34 n n O34 PA4 4WY sing 35 n n PA4 O44 4WY sing 36 n n O55 PB5 4WY doub 37 n n CA5 O25 4WY doub 38 n n CA5 CB5 4WY sing 39 n n PB5 CB5 4WY sing 40 n n PB5 O65 4WY sing 41 n n PB5 O75 4WY sing 42 n n O65 H1 4WY sing 43 n n O75 H2 4WY sing 44 n n CB5 H3 4WY sing 45 n n CB5 H4 4WY sing 46 n n C5A H5 4WY sing 47 n n C6A H6 4WY sing 48 n n O26 H7 4WY sing 49 n n O36 H8 4WY sing 50 n n C4A H9 4WY sing 51 n n O34 H10 4WY sing 52 n n O44 H11 4WY sing 53 n n C3A H12 4WY sing 54 n n O23 H13 4WY sing 55 n n O43 H14 4WY sing 56 n n C2A H15 4WY sing 57 n n O42 H16 4WY sing 58 n n O22 H17 4WY sing 59 n n C1A H18 4WY sing 60 n n CB1 H19 4WY sing 61 n n CB1 H20 4WY sing 62 n n O51 H21 4WY sing 63 n n O71 H22 4WY sing 64 n n # _atom_sites.entry_id 7AUO _atom_sites.fract_transf_matrix[1][1] 0.016214 _atom_sites.fract_transf_matrix[1][2] 0.009361 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011208 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 4WY _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 201 _pdbx_nonpoly_scheme.pdb_mon_id 4WY _pdbx_nonpoly_scheme.auth_mon_id 4WY _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O55 4WY . . . B 2 6.014 -22.178 1.481 1 131.89 ? O55 4WY 201 A 1 HETATM 2 P PB5 4WY . . . B 2 4.784 -21.348 1.753 1 134.09 ? PB5 4WY 201 A 1 HETATM 3 O O65 4WY . . . B 2 4.223 -21.637 3.125 1 138.58 ? O65 4WY 201 A 1 HETATM 4 O O75 4WY . . . B 2 3.748 -21.56 0.674 1 136.75 ? O75 4WY 201 A 1 HETATM 5 C CB5 4WY . . . B 2 5.235 -19.593 1.739 1 129.49 ? CB5 4WY 201 A 1 HETATM 6 C CA5 4WY . . . B 2 6.01 -19.073 2.938 1 126.5 ? CA5 4WY 201 A 1 HETATM 7 O O25 4WY . . . B 2 5.99 -19.519 4.063 1 123.95 ? O25 4WY 201 A 1 HETATM 8 O O15 4WY . . . B 2 6.767 -18.032 2.571 1 120.8 ? O15 4WY 201 A 1 HETATM 9 C C5A 4WY . . . B 2 7.04 -16.967 3.501 1 115.73 ? C5A 4WY 201 A 1 HETATM 10 C C6A 4WY . . . B 2 6.644 -15.665 2.83 1 117.07 ? C6A 4WY 201 A 1 HETATM 11 O O16 4WY . . . B 2 5.178 -15.622 2.81 1 121.43 ? O16 4WY 201 A 1 HETATM 12 P PA6 4WY . . . B 2 4.298 -16.187 1.584 1 121.84 ? PA6 4WY 201 A 1 HETATM 13 O O26 4WY . . . B 2 3.632 -14.951 1.021 1 125.79 ? O26 4WY 201 A 1 HETATM 14 O O46 4WY . . . B 2 5.203 -16.857 0.556 1 120.51 ? O46 4WY 201 A 1 HETATM 15 O O36 4WY . . . B 2 3.277 -17.157 2.128 1 125.75 ? O36 4WY 201 A 1 HETATM 16 C C4A 4WY . . . B 2 8.53 -17.04 3.747 1 112.33 ? C4A 4WY 201 A 1 HETATM 17 O O14 4WY . . . B 2 8.795 -18.214 4.563 1 110.7 ? O14 4WY 201 A 1 HETATM 18 P PA4 4WY . . . B 2 10.043 -19.174 4.285 1 107.78 ? PA4 4WY 201 A 1 HETATM 19 O O34 4WY . . . B 2 10.348 -19.127 2.8 1 107.5 ? O34 4WY 201 A 1 HETATM 20 O O24 4WY . . . B 2 9.56 -20.545 4.72 1 112.46 ? O24 4WY 201 A 1 HETATM 21 O O44 4WY . . . B 2 11.187 -18.671 5.132 1 104.38 ? O44 4WY 201 A 1 HETATM 22 C C3A 4WY . . . B 2 9.043 -15.829 4.493 1 112.13 ? C3A 4WY 201 A 1 HETATM 23 O O13 4WY . . . B 2 10.494 -15.954 4.59 1 110.12 ? O13 4WY 201 A 1 HETATM 24 P PA3 4WY . . . B 2 11.319 -15.59 5.888 1 112.2 ? PA3 4WY 201 A 1 HETATM 25 O O23 4WY . . . B 2 12.668 -16.255 5.666 1 111.68 ? O23 4WY 201 A 1 HETATM 26 O O43 4WY . . . B 2 11.416 -14.073 5.9 1 113.37 ? O43 4WY 201 A 1 HETATM 27 O O33 4WY . . . B 2 10.606 -16.129 7.124 1 115.67 ? O33 4WY 201 A 1 HETATM 28 C C2A 4WY . . . B 2 8.702 -14.567 3.73 1 113.67 ? C2A 4WY 201 A 1 HETATM 29 O O12 4WY . . . B 2 9.299 -14.658 2.389 1 112.66 ? O12 4WY 201 A 1 HETATM 30 P PA2 4WY . . . B 2 10.312 -13.615 1.731 1 111.27 ? PA2 4WY 201 A 1 HETATM 31 O O32 4WY . . . B 2 10.346 -13.961 0.254 1 108.52 ? O32 4WY 201 A 1 HETATM 32 O O42 4WY . . . B 2 11.647 -13.856 2.411 1 112.79 ? O42 4WY 201 A 1 HETATM 33 O O22 4WY . . . B 2 9.79 -12.205 1.985 1 113.94 ? O22 4WY 201 A 1 HETATM 34 C C1A 4WY . . . B 2 7.199 -14.455 3.569 1 116.38 ? C1A 4WY 201 A 1 HETATM 35 O O11 4WY . . . B 2 6.97 -13.273 2.774 1 120.35 ? O11 4WY 201 A 1 HETATM 36 C CA1 4WY . . . B 2 5.941 -12.475 3.076 1 127.13 ? CA1 4WY 201 A 1 HETATM 37 O O21 4WY . . . B 2 5.396 -12.469 4.142 1 130.86 ? O21 4WY 201 A 1 HETATM 38 C CB1 4WY . . . B 2 5.583 -11.597 1.922 1 130.7 ? CB1 4WY 201 A 1 HETATM 39 P PB1 4WY . . . B 2 3.797 -11.408 1.71 1 137.17 ? PB1 4WY 201 A 1 HETATM 40 O O51 4WY . . . B 2 3.099 -11.675 3.027 1 140.71 ? O51 4WY 201 A 1 HETATM 41 O O61 4WY . . . B 2 3.373 -12.393 0.656 1 132.2 ? O61 4WY 201 A 1 HETATM 42 O O71 4WY . . . B 2 3.576 -9.987 1.259 1 139.41 ? O71 4WY 201 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 42 #