data_7AUR # _model_server_result.job_id gh_emYCa8rzNbaFf9nwnqA _model_server_result.datetime_utc '2024-11-13 18:22:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aur # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7AUR # _exptl.entry_id 7AUR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7AUR _cell.length_a 61.958 _cell.length_b 61.958 _cell.length_c 95.924 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AUR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 83 A GLU 80 1_555 F MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc2 B O2G ANP . A ANP 201 1_555 E MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? metalc ? metalc3 E MG MG . A MG 204 1_555 H O HOH . A HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc4 E MG MG . A MG 204 1_555 H O HOH . A HOH 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc5 F MG MG . A MG 205 1_555 H O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc6 F MG MG . A MG 205 1_555 H O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc7 F MG MG . A MG 205 1_555 H O HOH . A HOH 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc8 F MG MG . A MG 205 1_555 H O HOH . A HOH 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 13 n n PG O2G ANP sing 14 n n PG O3G ANP sing 15 n n PG N3B ANP sing 16 n n O2G HOG2 ANP sing 17 n n O3G HOG3 ANP sing 18 n n PB O1B ANP doub 19 n n PB O2B ANP sing 20 n n PB N3B ANP sing 21 n n PB O3A ANP sing 22 n n O2B HOB2 ANP sing 23 n n N3B HNB1 ANP sing 24 n n PA O1A ANP doub 25 n n PA O2A ANP sing 26 n n PA O3A ANP sing 27 n n PA O5' ANP sing 28 n n O2A HOA2 ANP sing 29 n n O5' C5' ANP sing 30 n n C5' C4' ANP sing 31 n n C5' "H5'1" ANP sing 32 n n C5' "H5'2" ANP sing 33 n n C4' O4' ANP sing 34 n n C4' C3' ANP sing 35 n n C4' H4' ANP sing 36 n n O4' C1' ANP sing 37 n n C3' O3' ANP sing 38 n n C3' C2' ANP sing 39 n n C3' H3' ANP sing 40 n n O3' HO3' ANP sing 41 n n C2' O2' ANP sing 42 n n C2' C1' ANP sing 43 n n C2' H2' ANP sing 44 n n O2' HO2' ANP sing 45 n n C1' N9 ANP sing 46 n n C1' H1' ANP sing 47 n n N9 C8 ANP sing 48 n y N9 C4 ANP sing 49 n y C8 N7 ANP doub 50 n y C8 H8 ANP sing 51 n n N7 C5 ANP sing 52 n y C5 C6 ANP sing 53 n y C5 C4 ANP doub 54 n y C6 N6 ANP sing 55 n n C6 N1 ANP doub 56 n y N6 HN61 ANP sing 57 n n N6 HN62 ANP sing 58 n n N1 C2 ANP sing 59 n y C2 N3 ANP doub 60 n y C2 H2 ANP sing 61 n n N3 C4 ANP sing 62 n y # _atom_sites.entry_id 7AUR _atom_sites.fract_transf_matrix[1][1] 0.01614 _atom_sites.fract_transf_matrix[1][2] 0.009318 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018637 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010425 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 201 201 ANP ANP . C 2 ANP A 1 202 301 ANP ANP . D 2 ANP A 1 203 401 ANP ANP . E 3 MG A 1 204 1 MG MG . F 3 MG A 1 205 2 MG MG . G 4 CL A 1 206 1 CL CL . H 5 HOH A 1 301 124 HOH HOH . H 5 HOH A 2 302 29 HOH HOH . H 5 HOH A 3 303 162 HOH HOH . H 5 HOH A 4 304 115 HOH HOH . H 5 HOH A 5 305 82 HOH HOH . H 5 HOH A 6 306 85 HOH HOH . H 5 HOH A 7 307 55 HOH HOH . H 5 HOH A 8 308 119 HOH HOH . H 5 HOH A 9 309 153 HOH HOH . H 5 HOH A 10 310 158 HOH HOH . H 5 HOH A 11 311 50 HOH HOH . H 5 HOH A 12 312 146 HOH HOH . H 5 HOH A 13 313 163 HOH HOH . H 5 HOH A 14 314 77 HOH HOH . H 5 HOH A 15 315 144 HOH HOH . H 5 HOH A 16 316 48 HOH HOH . H 5 HOH A 17 317 92 HOH HOH . H 5 HOH A 18 318 11 HOH HOH . H 5 HOH A 19 319 123 HOH HOH . H 5 HOH A 20 320 62 HOH HOH . H 5 HOH A 21 321 161 HOH HOH . H 5 HOH A 22 322 147 HOH HOH . H 5 HOH A 23 323 154 HOH HOH . H 5 HOH A 24 324 120 HOH HOH . H 5 HOH A 25 325 36 HOH HOH . H 5 HOH A 26 326 19 HOH HOH . H 5 HOH A 27 327 31 HOH HOH . H 5 HOH A 28 328 42 HOH HOH . H 5 HOH A 29 329 113 HOH HOH . H 5 HOH A 30 330 81 HOH HOH . H 5 HOH A 31 331 20 HOH HOH . H 5 HOH A 32 332 65 HOH HOH . H 5 HOH A 33 333 24 HOH HOH . H 5 HOH A 34 334 23 HOH HOH . H 5 HOH A 35 335 7 HOH HOH . H 5 HOH A 36 336 69 HOH HOH . H 5 HOH A 37 337 27 HOH HOH . H 5 HOH A 38 338 32 HOH HOH . H 5 HOH A 39 339 5 HOH HOH . H 5 HOH A 40 340 94 HOH HOH . H 5 HOH A 41 341 83 HOH HOH . H 5 HOH A 42 342 10 HOH HOH . H 5 HOH A 43 343 159 HOH HOH . H 5 HOH A 44 344 125 HOH HOH . H 5 HOH A 45 345 22 HOH HOH . H 5 HOH A 46 346 6 HOH HOH . H 5 HOH A 47 347 100 HOH HOH . H 5 HOH A 48 348 152 HOH HOH . H 5 HOH A 49 349 3 HOH HOH . H 5 HOH A 50 350 54 HOH HOH . H 5 HOH A 51 351 15 HOH HOH . H 5 HOH A 52 352 151 HOH HOH . H 5 HOH A 53 353 4 HOH HOH . H 5 HOH A 54 354 66 HOH HOH . H 5 HOH A 55 355 21 HOH HOH . H 5 HOH A 56 356 95 HOH HOH . H 5 HOH A 57 357 63 HOH HOH . H 5 HOH A 58 358 68 HOH HOH . H 5 HOH A 59 359 80 HOH HOH . H 5 HOH A 60 360 17 HOH HOH . H 5 HOH A 61 361 25 HOH HOH . H 5 HOH A 62 362 67 HOH HOH . H 5 HOH A 63 363 35 HOH HOH . H 5 HOH A 64 364 16 HOH HOH . H 5 HOH A 65 365 70 HOH HOH . H 5 HOH A 66 366 104 HOH HOH . H 5 HOH A 67 367 18 HOH HOH . H 5 HOH A 68 368 136 HOH HOH . H 5 HOH A 69 369 12 HOH HOH . H 5 HOH A 70 370 129 HOH HOH . H 5 HOH A 71 371 135 HOH HOH . H 5 HOH A 72 372 155 HOH HOH . H 5 HOH A 73 373 53 HOH HOH . H 5 HOH A 74 374 44 HOH HOH . H 5 HOH A 75 375 13 HOH HOH . H 5 HOH A 76 376 28 HOH HOH . H 5 HOH A 77 377 78 HOH HOH . H 5 HOH A 78 378 26 HOH HOH . H 5 HOH A 79 379 59 HOH HOH . H 5 HOH A 80 380 102 HOH HOH . H 5 HOH A 81 381 91 HOH HOH . H 5 HOH A 82 382 143 HOH HOH . H 5 HOH A 83 383 116 HOH HOH . H 5 HOH A 84 384 14 HOH HOH . H 5 HOH A 85 385 47 HOH HOH . H 5 HOH A 86 386 34 HOH HOH . H 5 HOH A 87 387 71 HOH HOH . H 5 HOH A 88 388 56 HOH HOH . H 5 HOH A 89 389 9 HOH HOH . H 5 HOH A 90 390 140 HOH HOH . H 5 HOH A 91 391 133 HOH HOH . H 5 HOH A 92 392 137 HOH HOH . H 5 HOH A 93 393 160 HOH HOH . H 5 HOH A 94 394 121 HOH HOH . H 5 HOH A 95 395 134 HOH HOH . H 5 HOH A 96 396 97 HOH HOH . H 5 HOH A 97 397 38 HOH HOH . H 5 HOH A 98 398 96 HOH HOH . H 5 HOH A 99 399 138 HOH HOH . H 5 HOH A 100 400 130 HOH HOH . H 5 HOH A 101 401 131 HOH HOH . H 5 HOH A 102 402 142 HOH HOH . H 5 HOH A 103 403 156 HOH HOH . H 5 HOH A 104 404 74 HOH HOH . H 5 HOH A 105 405 164 HOH HOH . H 5 HOH A 106 406 132 HOH HOH . H 5 HOH A 107 407 157 HOH HOH . H 5 HOH A 108 408 127 HOH HOH . H 5 HOH A 109 409 107 HOH HOH . H 5 HOH A 110 410 141 HOH HOH . H 5 HOH A 111 411 103 HOH HOH . H 5 HOH A 112 412 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ANP . . . D 2 22.582 -35.129 -18.481 0.5 66.73 ? PG ANP 203 A 1 HETATM 2 O O1G ANP . . . D 2 23.721 -35.72 -19.185 0.5 65.25 ? O1G ANP 203 A 1 HETATM 3 O O2G ANP . . . D 2 22.42 -33.586 -18.821 0.5 65.33 ? O2G ANP 203 A 1 HETATM 4 O O3G ANP . . . D 2 21.23 -35.807 -18.87 0.5 64.22 ? O3G ANP 203 A 1 HETATM 5 P PB ANP . . . D 2 21.708 -35.047 -15.662 0.5 67.1 ? PB ANP 203 A 1 HETATM 6 O O1B ANP . . . D 2 21.799 -36.093 -14.638 0.5 65.84 ? O1B ANP 203 A 1 HETATM 7 O O2B ANP . . . D 2 20.244 -34.995 -16.206 0.5 68.9 ? O2B ANP 203 A 1 HETATM 8 N N3B ANP . . . D 2 22.798 -35.219 -16.865 0.5 65.5 ? N3B ANP 203 A 1 HETATM 9 P PA ANP . . . D 2 21.345 -32.176 -15.152 0.5 58.31 ? PA ANP 203 A 1 HETATM 10 O O1A ANP . . . D 2 21.755 -31.32 -13.949 0.5 56.81 ? O1A ANP 203 A 1 HETATM 11 O O2A ANP . . . D 2 21.71 -31.588 -16.47 0.5 56.18 ? O2A ANP 203 A 1 HETATM 12 O O3A ANP . . . D 2 21.967 -33.63 -14.949 0.5 59 ? O3A ANP 203 A 1 HETATM 13 O O5' ANP . . . D 2 19.745 -32.361 -15.103 0.5 49.33 ? O5' ANP 203 A 1 HETATM 14 C C5' ANP . . . D 2 19.026 -33.428 -14.45 0.5 46.6 ? C5' ANP 203 A 1 HETATM 15 C C4' ANP . . . D 2 17.678 -33.557 -15.11 0.5 42.57 ? C4' ANP 203 A 1 HETATM 16 O O4' ANP . . . D 2 16.993 -32.287 -15.053 0.5 40.89 ? O4' ANP 203 A 1 HETATM 17 C C3' ANP . . . D 2 17.699 -33.927 -16.589 0.5 41.87 ? C3' ANP 203 A 1 HETATM 18 O O3' ANP . . . D 2 16.476 -34.556 -16.961 0.5 38.81 ? O3' ANP 203 A 1 HETATM 19 C C2' ANP . . . D 2 17.81 -32.561 -17.262 0.5 40.06 ? C2' ANP 203 A 1 HETATM 20 O O2' ANP . . . D 2 17.296 -32.597 -18.591 0.5 39.78 ? O2' ANP 203 A 1 HETATM 21 C C1' ANP . . . D 2 16.928 -31.706 -16.344 0.5 38.7 ? C1' ANP 203 A 1 HETATM 22 N N9 ANP . . . D 2 17.364 -30.319 -16.229 0.5 36.62 ? N9 ANP 203 A 1 HETATM 23 C C8 ANP . . . D 2 18.655 -29.862 -16.156 0.5 36.78 ? C8 ANP 203 A 1 HETATM 24 N N7 ANP . . . D 2 18.755 -28.561 -16.033 0.5 34.02 ? N7 ANP 203 A 1 HETATM 25 C C5 ANP . . . D 2 17.435 -28.128 -16.027 0.5 34.53 ? C5 ANP 203 A 1 HETATM 26 C C6 ANP . . . D 2 16.848 -26.851 -15.936 0.5 32.66 ? C6 ANP 203 A 1 HETATM 27 N N6 ANP . . . D 2 17.585 -25.732 -15.861 0.5 32.02 ? N6 ANP 203 A 1 HETATM 28 N N1 ANP . . . D 2 15.499 -26.766 -15.965 0.5 31.07 ? N1 ANP 203 A 1 HETATM 29 C C2 ANP . . . D 2 14.791 -27.893 -16.078 0.5 32.45 ? C2 ANP 203 A 1 HETATM 30 N N3 ANP . . . D 2 15.231 -29.147 -16.174 0.5 32.63 ? N3 ANP 203 A 1 HETATM 31 C C4 ANP . . . D 2 16.569 -29.201 -16.146 0.5 34.85 ? C4 ANP 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #