data_7AUS # _model_server_result.job_id 2vL8TGG5qM9WfStMwR5goQ _model_server_result.datetime_utc '2024-11-15 13:47:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7AUS # _exptl.entry_id 7AUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 1217.714 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description pentadecaphosphate _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7AUS _cell.length_a 61.67 _cell.length_b 61.67 _cell.length_c 95.73 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LYS 66 A LYS 63 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc2 A OE1 GLU 87 A GLU 84 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc3 B O52 RYT . A RYT 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc4 B O53 RYT . A RYT 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc5 B O64 RYT . A RYT 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc6 C MG MG . A MG 202 1_555 D O HOH . A HOH 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? # _chem_comp.formula 'H17 O46 P15' _chem_comp.formula_weight 1217.714 _chem_comp.id RYT _chem_comp.mon_nstd_flag . _chem_comp.name pentadecaphosphate _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'bis[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl(phosphonooxy)phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl] hydrogen phosphate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O54 P14 RYT doub 277 n n O63 P13 RYT doub 278 n n O44 P14 RYT sing 279 n n O44 P13 RYT sing 280 n n O53 P13 RYT sing 281 n n P14 O64 RYT sing 282 n n P14 O45 RYT sing 283 n n P13 O43 RYT sing 284 n n O39 P09 RYT doub 285 n n O65 P15 RYT doub 286 n n O50 P10 RYT doub 287 n n O45 P15 RYT sing 288 n n O75 P15 RYT sing 289 n n O29 P09 RYT sing 290 n n P15 O55 RYT sing 291 n n O43 P12 RYT sing 292 n n P09 O40 RYT sing 293 n n P09 O19 RYT sing 294 n n P10 O41 RYT sing 295 n n P10 O40 RYT sing 296 n n P10 O60 RYT sing 297 n n O38 P08 RYT doub 298 n n O41 P11 RYT sing 299 n n O28 P08 RYT sing 300 n n O52 P12 RYT doub 301 n n O19 P08 RYT sing 302 n n P08 O18 RYT sing 303 n n P12 O42 RYT sing 304 n n P12 O62 RYT sing 305 n n O42 P11 RYT sing 306 n n O51 P11 RYT doub 307 n n P11 O61 RYT sing 308 n n O18 P07 RYT sing 309 n n O37 P07 RYT doub 310 n n O36 P06 RYT doub 311 n n O17 P07 RYT sing 312 n n O17 P06 RYT sing 313 n n O16 P06 RYT sing 314 n n O16 P05 RYT sing 315 n n O35 P05 RYT doub 316 n n P07 O27 RYT sing 317 n n O25 P05 RYT sing 318 n n P06 O26 RYT sing 319 n n P05 O15 RYT sing 320 n n O15 P04 RYT sing 321 n n O24 P04 RYT doub 322 n n P04 O34 RYT sing 323 n n P04 O14 RYT sing 324 n n O14 P03 RYT sing 325 n n O33 P03 RYT doub 326 n n O13 P03 RYT sing 327 n n O13 P02 RYT sing 328 n n P03 O23 RYT sing 329 n n O22 P02 RYT doub 330 n n O12 P02 RYT sing 331 n n O12 P01 RYT sing 332 n n P02 O32 RYT sing 333 n n O11 P01 RYT doub 334 n n P01 O31 RYT sing 335 n n P01 O21 RYT sing 336 n n O32 H1 RYT sing 337 n n O23 H2 RYT sing 338 n n O34 H3 RYT sing 339 n n O25 H4 RYT sing 340 n n O26 H5 RYT sing 341 n n O27 H6 RYT sing 342 n n O28 H7 RYT sing 343 n n O29 H8 RYT sing 344 n n O60 H9 RYT sing 345 n n O61 H10 RYT sing 346 n n O62 H11 RYT sing 347 n n O53 H12 RYT sing 348 n n O64 H13 RYT sing 349 n n O55 H14 RYT sing 350 n n O75 H15 RYT sing 351 n n O21 H16 RYT sing 352 n n O31 H17 RYT sing 353 n n # _atom_sites.entry_id 7AUS _atom_sites.fract_transf_matrix[1][1] 0.016215 _atom_sites.fract_transf_matrix[1][2] 0.009362 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010446 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RYT A 1 201 201 RYT P15 . C 3 MG A 1 202 1 MG MG . D 4 HOH A 1 301 25 HOH HOH . D 4 HOH A 2 302 27 HOH HOH . D 4 HOH A 3 303 53 HOH HOH . D 4 HOH A 4 304 13 HOH HOH . D 4 HOH A 5 305 45 HOH HOH . D 4 HOH A 6 306 107 HOH HOH . D 4 HOH A 7 307 32 HOH HOH . D 4 HOH A 8 308 104 HOH HOH . D 4 HOH A 9 309 99 HOH HOH . D 4 HOH A 10 310 56 HOH HOH . D 4 HOH A 11 311 125 HOH HOH . D 4 HOH A 12 312 85 HOH HOH . D 4 HOH A 13 313 6 HOH HOH . D 4 HOH A 14 314 24 HOH HOH . D 4 HOH A 15 315 29 HOH HOH . D 4 HOH A 16 316 106 HOH HOH . D 4 HOH A 17 317 47 HOH HOH . D 4 HOH A 18 318 21 HOH HOH . D 4 HOH A 19 319 41 HOH HOH . D 4 HOH A 20 320 33 HOH HOH . D 4 HOH A 21 321 38 HOH HOH . D 4 HOH A 22 322 18 HOH HOH . D 4 HOH A 23 323 15 HOH HOH . D 4 HOH A 24 324 117 HOH HOH . D 4 HOH A 25 325 80 HOH HOH . D 4 HOH A 26 326 119 HOH HOH . D 4 HOH A 27 327 10 HOH HOH . D 4 HOH A 28 328 26 HOH HOH . D 4 HOH A 29 329 68 HOH HOH . D 4 HOH A 30 330 58 HOH HOH . D 4 HOH A 31 331 116 HOH HOH . D 4 HOH A 32 332 39 HOH HOH . D 4 HOH A 33 333 61 HOH HOH . D 4 HOH A 34 334 108 HOH HOH . D 4 HOH A 35 335 52 HOH HOH . D 4 HOH A 36 336 1 HOH HOH . D 4 HOH A 37 337 11 HOH HOH . D 4 HOH A 38 338 50 HOH HOH . D 4 HOH A 39 339 63 HOH HOH . D 4 HOH A 40 340 8 HOH HOH . D 4 HOH A 41 341 51 HOH HOH . D 4 HOH A 42 342 4 HOH HOH . D 4 HOH A 43 343 19 HOH HOH . D 4 HOH A 44 344 16 HOH HOH . D 4 HOH A 45 345 40 HOH HOH . D 4 HOH A 46 346 123 HOH HOH . D 4 HOH A 47 347 81 HOH HOH . D 4 HOH A 48 348 111 HOH HOH . D 4 HOH A 49 349 124 HOH HOH . D 4 HOH A 50 350 2 HOH HOH . D 4 HOH A 51 351 110 HOH HOH . D 4 HOH A 52 352 71 HOH HOH . D 4 HOH A 53 353 9 HOH HOH . D 4 HOH A 54 354 118 HOH HOH . D 4 HOH A 55 355 17 HOH HOH . D 4 HOH A 56 356 44 HOH HOH . D 4 HOH A 57 357 90 HOH HOH . D 4 HOH A 58 358 7 HOH HOH . D 4 HOH A 59 359 96 HOH HOH . D 4 HOH A 60 360 83 HOH HOH . D 4 HOH A 61 361 67 HOH HOH . D 4 HOH A 62 362 113 HOH HOH . D 4 HOH A 63 363 114 HOH HOH . D 4 HOH A 64 364 112 HOH HOH . D 4 HOH A 65 365 72 HOH HOH . D 4 HOH A 66 366 70 HOH HOH . D 4 HOH A 67 367 62 HOH HOH . D 4 HOH A 68 368 121 HOH HOH . D 4 HOH A 69 369 69 HOH HOH . D 4 HOH A 70 370 66 HOH HOH . D 4 HOH A 71 371 55 HOH HOH . D 4 HOH A 72 372 82 HOH HOH . D 4 HOH A 73 373 109 HOH HOH . D 4 HOH A 74 374 120 HOH HOH . D 4 HOH A 75 375 75 HOH HOH . D 4 HOH A 76 376 3 HOH HOH . D 4 HOH A 77 377 28 HOH HOH . D 4 HOH A 78 378 115 HOH HOH . D 4 HOH A 79 379 122 HOH HOH . D 4 HOH A 80 380 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O22 RYT . . . B 2 3.76 -29.471 12.246 1 116.85 ? O22 RYT 201 A 1 HETATM 2 P P02 RYT . . . B 2 3.984 -28.017 12.654 1 119.99 ? P02 RYT 201 A 1 HETATM 3 O O32 RYT . . . B 2 3.419 -27.628 13.963 1 119.04 ? O32 RYT 201 A 1 HETATM 4 O O12 RYT . . . B 2 5.552 -27.756 12.612 1 120.02 ? O12 RYT 201 A 1 HETATM 5 O O13 RYT . . . B 2 3.43 -27.102 11.474 1 123.1 ? O13 RYT 201 A 1 HETATM 6 P P03 RYT . . . B 2 2.2 -26.094 11.522 1 127.8 ? P03 RYT 201 A 1 HETATM 7 O O33 RYT . . . B 2 2.686 -24.783 10.9 1 129.76 ? O33 RYT 201 A 1 HETATM 8 O O23 RYT . . . B 2 1.599 -25.984 12.868 1 126.86 ? O23 RYT 201 A 1 HETATM 9 O O14 RYT . . . B 2 1.164 -26.758 10.512 1 127.94 ? O14 RYT 201 A 1 HETATM 10 P P04 RYT . . . B 2 0.41 -26.041 9.309 1 128.74 ? P04 RYT 201 A 1 HETATM 11 O O34 RYT . . . B 2 -0.132 -24.716 9.855 1 126.67 ? O34 RYT 201 A 1 HETATM 12 O O24 RYT . . . B 2 -0.593 -26.925 8.671 1 125.5 ? O24 RYT 201 A 1 HETATM 13 O O15 RYT . . . B 2 1.651 -25.704 8.367 1 127.16 ? O15 RYT 201 A 1 HETATM 14 P P05 RYT . . . B 2 2.008 -25.939 6.833 1 122.95 ? P05 RYT 201 A 1 HETATM 15 O O35 RYT . . . B 2 1.08 -27.04 6.314 1 122.46 ? O35 RYT 201 A 1 HETATM 16 O O25 RYT . . . B 2 3.454 -26.178 6.626 1 118.12 ? O25 RYT 201 A 1 HETATM 17 O O16 RYT . . . B 2 1.527 -24.568 6.18 1 117.06 ? O16 RYT 201 A 1 HETATM 18 P P06 RYT . . . B 2 1.303 -23.08 6.707 1 111.45 ? P06 RYT 201 A 1 HETATM 19 O O36 RYT . . . B 2 0.065 -22.521 5.997 1 104.99 ? O36 RYT 201 A 1 HETATM 20 O O26 RYT . . . B 2 1.293 -22.97 8.184 1 114.08 ? O26 RYT 201 A 1 HETATM 21 O O17 RYT . . . B 2 2.566 -22.336 6.092 1 101.86 ? O17 RYT 201 A 1 HETATM 22 P P07 RYT . . . B 2 3.287 -20.971 6.477 1 95.11 ? P07 RYT 201 A 1 HETATM 23 O O37 RYT . . . B 2 2.522 -19.796 5.997 1 93.67 ? O37 RYT 201 A 1 HETATM 24 O O27 RYT . . . B 2 3.599 -21.035 7.977 1 91.91 ? O27 RYT 201 A 1 HETATM 25 O O18 RYT . . . B 2 4.66 -21.117 5.686 1 78.9 ? O18 RYT 201 A 1 HETATM 26 P P08 RYT . . . B 2 4.941 -21.156 4.121 1 65.43 ? P08 RYT 201 A 1 HETATM 27 O O38 RYT . . . B 2 3.593 -21.038 3.417 1 65.2 ? O38 RYT 201 A 1 HETATM 28 O O28 RYT . . . B 2 5.83 -22.283 3.75 1 58.89 ? O28 RYT 201 A 1 HETATM 29 O O19 RYT . . . B 2 5.669 -19.76 3.917 1 64.29 ? O19 RYT 201 A 1 HETATM 30 P P09 RYT . . . B 2 6.795 -19.329 2.882 1 57.76 ? P09 RYT 201 A 1 HETATM 31 O O39 RYT . . . B 2 6.836 -20.223 1.702 1 56.53 ? O39 RYT 201 A 1 HETATM 32 O O29 RYT . . . B 2 6.579 -17.833 2.599 1 61.57 ? O29 RYT 201 A 1 HETATM 33 O O40 RYT . . . B 2 8.101 -19.451 3.777 1 49.22 ? O40 RYT 201 A 1 HETATM 34 P P10 RYT . . . B 2 9.58 -19.884 3.407 1 48.13 ? P10 RYT 201 A 1 HETATM 35 O O60 RYT . . . B 2 10.077 -20.896 4.34 1 45.81 ? O60 RYT 201 A 1 HETATM 36 O O50 RYT . . . B 2 9.606 -20.2 1.903 1 46.15 ? O50 RYT 201 A 1 HETATM 37 O O41 RYT . . . B 2 10.382 -18.517 3.533 1 54.48 ? O41 RYT 201 A 1 HETATM 38 P P11 RYT . . . B 2 10.975 -17.731 4.776 1 53.31 ? P11 RYT 201 A 1 HETATM 39 O O61 RYT . . . B 2 10.457 -18.437 6.024 1 57.44 ? O61 RYT 201 A 1 HETATM 40 O O51 RYT . . . B 2 12.429 -17.612 4.673 1 55.11 ? O51 RYT 201 A 1 HETATM 41 O O42 RYT . . . B 2 10.157 -16.377 4.658 1 57.54 ? O42 RYT 201 A 1 HETATM 42 P P12 RYT . . . B 2 10.604 -14.942 4.152 1 60.83 ? P12 RYT 201 A 1 HETATM 43 O O62 RYT . . . B 2 10.081 -13.939 5.182 1 62.68 ? O62 RYT 201 A 1 HETATM 44 O O52 RYT . . . B 2 12.056 -14.938 3.901 1 59.65 ? O52 RYT 201 A 1 HETATM 45 O O43 RYT . . . B 2 9.731 -14.758 2.833 1 66.49 ? O43 RYT 201 A 1 HETATM 46 P P13 RYT . . . B 2 9.987 -14.907 1.266 1 74.45 ? P13 RYT 201 A 1 HETATM 47 O O63 RYT . . . B 2 8.697 -15.433 0.637 1 77.65 ? O63 RYT 201 A 1 HETATM 48 O O53 RYT . . . B 2 11.188 -15.707 0.951 1 67.18 ? O53 RYT 201 A 1 HETATM 49 O O44 RYT . . . B 2 10.125 -13.389 0.802 1 77.55 ? O44 RYT 201 A 1 HETATM 50 P P14 RYT . . . B 2 11.176 -12.218 1.05 1 78.08 ? P14 RYT 201 A 1 HETATM 51 O O64 RYT . . . B 2 12.491 -12.85 1.54 1 68.46 ? O64 RYT 201 A 1 HETATM 52 O O54 RYT . . . B 2 11.279 -11.35 -0.138 1 72.97 ? O54 RYT 201 A 1 HETATM 53 O O45 RYT . . . B 2 10.518 -11.469 2.293 1 86.22 ? O45 RYT 201 A 1 HETATM 54 P P15 RYT . . . B 2 9.059 -10.927 2.657 1 92.52 ? P15 RYT 201 A 1 HETATM 55 O O65 RYT . . . B 2 8.746 -9.696 1.859 1 89.68 ? O65 RYT 201 A 1 HETATM 56 O O55 RYT . . . B 2 8.958 -10.679 4.173 1 88.61 ? O55 RYT 201 A 1 HETATM 57 O O75 RYT . . . B 2 8.124 -12.105 2.31 1 88.74 ? O75 RYT 201 A 1 HETATM 58 P P01 RYT . . . B 2 6.6 -28.236 13.712 1 119.33 ? P01 RYT 201 A 1 HETATM 59 O O21 RYT . . . B 2 6.944 -27.065 14.644 1 120.05 ? O21 RYT 201 A 1 HETATM 60 O O11 RYT . . . B 2 7.787 -28.844 13.06 1 118.53 ? O11 RYT 201 A 1 HETATM 61 O O31 RYT . . . B 2 5.821 -29.266 14.542 1 121.5 ? O31 RYT 201 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 61 #