data_7AVF # _model_server_result.job_id fBFRl0UzaAMgHg8lxgDJeA _model_server_result.datetime_utc '2024-11-16 05:03:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7avf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":207}' # _entry.id 7AVF # _exptl.entry_id 7AVF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 89.211 _cell.angle_beta 72.459 _cell.angle_gamma 67.863 _cell.entry_id 7AVF _cell.length_a 26.76 _cell.length_b 31.07 _cell.length_c 33.77 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AVF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 243 n n N O2 NO3 sing 244 n n N O3 NO3 sing 245 n n # _atom_sites.entry_id 7AVF _atom_sites.fract_transf_matrix[1][1] 0.037369 _atom_sites.fract_transf_matrix[1][2] -0.015202 _atom_sites.fract_transf_matrix[1][3] -0.013617 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.034747 _atom_sites.fract_transf_matrix[2][3] 0.003952 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031256 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 201 1 NO3 NO3 . C 2 NO3 A 1 202 2 NO3 NO3 . D 2 NO3 A 1 203 3 NO3 NO3 . E 2 NO3 A 1 204 4 NO3 NO3 . F 3 ACT A 1 205 5 ACT ACT . G 2 NO3 A 1 206 6 NO3 NO3 . H 2 NO3 A 1 207 7 NO3 NO3 . I 2 NO3 A 1 208 8 NO3 NO3 . J 2 NO3 A 1 209 9 NO3 NO3 . K 3 ACT A 1 210 10 ACT ACT . L 4 HOH A 1 301 130 HOH HOH . L 4 HOH A 2 302 54 HOH HOH . L 4 HOH A 3 303 175 HOH HOH . L 4 HOH A 4 304 53 HOH HOH . L 4 HOH A 5 305 147 HOH HOH . L 4 HOH A 6 306 123 HOH HOH . L 4 HOH A 7 307 76 HOH HOH . L 4 HOH A 8 308 72 HOH HOH . L 4 HOH A 9 309 88 HOH HOH . L 4 HOH A 10 310 167 HOH HOH . L 4 HOH A 11 311 67 HOH HOH . L 4 HOH A 12 312 121 HOH HOH . L 4 HOH A 13 313 41 HOH HOH . L 4 HOH A 14 314 145 HOH HOH . L 4 HOH A 15 315 14 HOH HOH . L 4 HOH A 16 316 99 HOH HOH . L 4 HOH A 17 317 36 HOH HOH . L 4 HOH A 18 318 37 HOH HOH . L 4 HOH A 19 319 2 HOH HOH . L 4 HOH A 20 320 171 HOH HOH . L 4 HOH A 21 321 90 HOH HOH . L 4 HOH A 22 322 63 HOH HOH . L 4 HOH A 23 323 69 HOH HOH . L 4 HOH A 24 324 86 HOH HOH . L 4 HOH A 25 325 56 HOH HOH . L 4 HOH A 26 326 138 HOH HOH . L 4 HOH A 27 327 101 HOH HOH . L 4 HOH A 28 328 85 HOH HOH . L 4 HOH A 29 329 80 HOH HOH . L 4 HOH A 30 330 82 HOH HOH . L 4 HOH A 31 331 5 HOH HOH . L 4 HOH A 32 332 57 HOH HOH . L 4 HOH A 33 333 34 HOH HOH . L 4 HOH A 34 334 8 HOH HOH . L 4 HOH A 35 335 122 HOH HOH . L 4 HOH A 36 336 71 HOH HOH . L 4 HOH A 37 337 81 HOH HOH . L 4 HOH A 38 338 32 HOH HOH . L 4 HOH A 39 339 23 HOH HOH . L 4 HOH A 40 340 40 HOH HOH . L 4 HOH A 41 341 105 HOH HOH . L 4 HOH A 42 342 143 HOH HOH . L 4 HOH A 43 343 39 HOH HOH . L 4 HOH A 44 344 77 HOH HOH . L 4 HOH A 45 345 35 HOH HOH . L 4 HOH A 46 346 134 HOH HOH . L 4 HOH A 47 347 96 HOH HOH . L 4 HOH A 48 348 11 HOH HOH . L 4 HOH A 49 349 26 HOH HOH . L 4 HOH A 50 350 3 HOH HOH . L 4 HOH A 51 351 126 HOH HOH . L 4 HOH A 52 352 59 HOH HOH . L 4 HOH A 53 353 141 HOH HOH . L 4 HOH A 54 354 46 HOH HOH . L 4 HOH A 55 355 95 HOH HOH . L 4 HOH A 56 356 60 HOH HOH . L 4 HOH A 57 357 12 HOH HOH . L 4 HOH A 58 358 65 HOH HOH . L 4 HOH A 59 359 18 HOH HOH . L 4 HOH A 60 360 92 HOH HOH . L 4 HOH A 61 361 44 HOH HOH . L 4 HOH A 62 362 33 HOH HOH . L 4 HOH A 63 363 49 HOH HOH . L 4 HOH A 64 364 64 HOH HOH . L 4 HOH A 65 365 38 HOH HOH . L 4 HOH A 66 366 4 HOH HOH . L 4 HOH A 67 367 55 HOH HOH . L 4 HOH A 68 368 79 HOH HOH . L 4 HOH A 69 369 45 HOH HOH . L 4 HOH A 70 370 50 HOH HOH . L 4 HOH A 71 371 22 HOH HOH . L 4 HOH A 72 372 120 HOH HOH . L 4 HOH A 73 373 19 HOH HOH . L 4 HOH A 74 374 15 HOH HOH . L 4 HOH A 75 375 25 HOH HOH . L 4 HOH A 76 376 10 HOH HOH . L 4 HOH A 77 377 47 HOH HOH . L 4 HOH A 78 378 89 HOH HOH . L 4 HOH A 79 379 139 HOH HOH . L 4 HOH A 80 380 7 HOH HOH . L 4 HOH A 81 381 74 HOH HOH . L 4 HOH A 82 382 42 HOH HOH . L 4 HOH A 83 383 131 HOH HOH . L 4 HOH A 84 384 161 HOH HOH . L 4 HOH A 85 385 30 HOH HOH . L 4 HOH A 86 386 1 HOH HOH . L 4 HOH A 87 387 52 HOH HOH . L 4 HOH A 88 388 83 HOH HOH . L 4 HOH A 89 389 17 HOH HOH . L 4 HOH A 90 390 13 HOH HOH . L 4 HOH A 91 391 153 HOH HOH . L 4 HOH A 92 392 62 HOH HOH . L 4 HOH A 93 393 116 HOH HOH . L 4 HOH A 94 394 73 HOH HOH . L 4 HOH A 95 395 29 HOH HOH . L 4 HOH A 96 396 16 HOH HOH . L 4 HOH A 97 397 9 HOH HOH . L 4 HOH A 98 398 125 HOH HOH . L 4 HOH A 99 399 28 HOH HOH . L 4 HOH A 100 400 70 HOH HOH . L 4 HOH A 101 401 51 HOH HOH . L 4 HOH A 102 402 144 HOH HOH . L 4 HOH A 103 403 84 HOH HOH . L 4 HOH A 104 404 6 HOH HOH . L 4 HOH A 105 405 31 HOH HOH . L 4 HOH A 106 406 127 HOH HOH . L 4 HOH A 107 407 24 HOH HOH . L 4 HOH A 108 408 165 HOH HOH . L 4 HOH A 109 409 58 HOH HOH . L 4 HOH A 110 410 21 HOH HOH . L 4 HOH A 111 411 43 HOH HOH . L 4 HOH A 112 412 114 HOH HOH . L 4 HOH A 113 413 108 HOH HOH . L 4 HOH A 114 414 118 HOH HOH . L 4 HOH A 115 415 140 HOH HOH . L 4 HOH A 116 416 27 HOH HOH . L 4 HOH A 117 417 93 HOH HOH . L 4 HOH A 118 418 124 HOH HOH . L 4 HOH A 119 419 117 HOH HOH . L 4 HOH A 120 420 142 HOH HOH . L 4 HOH A 121 421 146 HOH HOH . L 4 HOH A 122 422 87 HOH HOH . L 4 HOH A 123 423 119 HOH HOH . L 4 HOH A 124 424 152 HOH HOH . L 4 HOH A 125 425 61 HOH HOH . L 4 HOH A 126 426 164 HOH HOH . L 4 HOH A 127 427 173 HOH HOH . L 4 HOH A 128 428 112 HOH HOH . L 4 HOH A 129 429 102 HOH HOH . L 4 HOH A 130 430 66 HOH HOH . L 4 HOH A 131 431 20 HOH HOH . L 4 HOH A 132 432 162 HOH HOH . L 4 HOH A 133 433 68 HOH HOH . L 4 HOH A 134 434 98 HOH HOH . L 4 HOH A 135 435 115 HOH HOH . L 4 HOH A 136 436 154 HOH HOH . L 4 HOH A 137 437 100 HOH HOH . L 4 HOH A 138 438 110 HOH HOH . L 4 HOH A 139 439 113 HOH HOH . L 4 HOH A 140 440 111 HOH HOH . L 4 HOH A 141 441 106 HOH HOH . L 4 HOH A 142 442 48 HOH HOH . L 4 HOH A 143 443 97 HOH HOH . L 4 HOH A 144 444 160 HOH HOH . L 4 HOH A 145 445 104 HOH HOH . L 4 HOH A 146 446 151 HOH HOH . L 4 HOH A 147 447 174 HOH HOH . L 4 HOH A 148 448 159 HOH HOH . L 4 HOH A 149 449 169 HOH HOH . L 4 HOH A 150 450 109 HOH HOH . L 4 HOH A 151 451 129 HOH HOH . L 4 HOH A 152 452 128 HOH HOH . L 4 HOH A 153 453 149 HOH HOH . L 4 HOH A 154 454 150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . H 2 21.33 -0.157 23.761 0.64 18.88 ? N NO3 207 A 1 HETATM 2 O O1 NO3 . . . H 2 20.991 -1.146 24.488 0.64 18.54 ? O1 NO3 207 A 1 HETATM 3 O O2 NO3 . . . H 2 20.653 0.871 23.886 0.64 18.96 ? O2 NO3 207 A 1 HETATM 4 O O3 NO3 . . . H 2 22.255 -0.154 22.903 0.64 16.9 ? O3 NO3 207 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #