data_7AVN
#
_model_server_result.job_id            pw0ta1MTMPgW4zrMvYw8-w 
_model_server_result.datetime_utc      '2024-11-23 00:35:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7avn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":314}' 
#
_entry.id    7AVN 
#
_exptl.entry_id    7AVN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         63.66 
_cell.angle_beta          78.98 
_cell.angle_gamma         80.33 
_cell.entry_id            7AVN 
_cell.length_a            40.686 
_cell.length_b            56.628 
_cell.length_c            57.386 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AVN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,IA 1 1 
B,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,JA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 P N N 
? 3 FA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASN 199 A ASN 199 1_555 A N LYR 200 A LYR 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? 
covale ? covale2 A C LYR 200 A LYR 200 1_555 A N VAL 201 A VAL 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale3 B C ASN 199 B ASN 199 1_555 B N LYR 200 B LYR 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale4 B C LYR 200 B LYR 200 1_555 B N VAL 201 B VAL 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O19 OLB doub 370 n n 
C1 O20 OLB sing 371 n n 
C2 C1 OLB sing 372 n n 
C3 C2 OLB sing 373 n n 
C4 C3 OLB sing 374 n n 
C5 C4 OLB sing 375 n n 
C5 C6 OLB sing 376 n n 
O20 C21 OLB sing 377 n n 
C21 C22 OLB sing 378 n n 
C22 C24 OLB sing 379 n n 
O23 C22 OLB sing 380 n n 
C24 O25 OLB sing 381 n n 
C6 C7 OLB sing 382 n n 
C7 C8 OLB sing 383 n n 
C8 C9 OLB sing 384 n n 
C9 C10 OLB doub 385 z n 
C10 C11 OLB sing 386 n n 
C2 H2 OLB sing 387 n n 
C2 H2A OLB sing 388 n n 
C3 H3 OLB sing 389 n n 
C3 H3A OLB sing 390 n n 
C4 H4 OLB sing 391 n n 
C4 H4A OLB sing 392 n n 
C5 H5 OLB sing 393 n n 
C5 H5A OLB sing 394 n n 
C21 H21 OLB sing 395 n n 
C21 H21A OLB sing 396 n n 
C22 H22 OLB sing 397 n n 
O23 HO23 OLB sing 398 n n 
C24 H24 OLB sing 399 n n 
C24 H24A OLB sing 400 n n 
O25 HO25 OLB sing 401 n n 
C6 H16 OLB sing 402 n n 
C6 H17 OLB sing 403 n n 
C7 H18 OLB sing 404 n n 
C7 H19 OLB sing 405 n n 
C8 H20 OLB sing 406 n n 
C8 H211 OLB sing 407 n n 
C9 H221 OLB sing 408 n n 
C10 H23 OLB sing 409 n n 
C11 H241 OLB sing 410 n n 
C11 H25 OLB sing 411 n n 
C11 C12 OLB sing 412 n n 
C12 H26 OLB sing 413 n n 
C12 C13 OLB sing 414 n n 
C12 H27 OLB sing 415 n n 
C13 C14 OLB sing 416 n n 
C13 H28 OLB sing 417 n n 
C13 H29 OLB sing 418 n n 
C14 H30 OLB sing 419 n n 
C14 H31 OLB sing 420 n n 
C14 C15 OLB sing 421 n n 
C15 C16 OLB sing 422 n n 
C15 H32 OLB sing 423 n n 
C15 H33 OLB sing 424 n n 
C16 H34 OLB sing 425 n n 
C16 H35 OLB sing 426 n n 
C16 C17 OLB sing 427 n n 
C17 C18 OLB sing 428 n n 
C17 H36 OLB sing 429 n n 
C17 H37 OLB sing 430 n n 
C18 H38 OLB sing 431 n n 
C18 H39 OLB sing 432 n n 
C18 H40 OLB sing 433 n n 
#
_atom_sites.entry_id                     7AVN 
_atom_sites.fract_transf_matrix[1][1]    0.024578 
_atom_sites.fract_transf_matrix[1][2]    -0.004186 
_atom_sites.fract_transf_matrix[1][3]    -0.003321 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017913 
_atom_sites.fract_transf_matrix[2][3]    -0.008419 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019616 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 LFA A 1 301 10 LFA LFA . 
D 2 LFA A 1 302 11 LFA LFA . 
E 2 LFA A 1 303 12 LFA LFA . 
F 2 LFA A 1 304 16 LFA LFA . 
G 2 LFA A 1 305 19 LFA LFA . 
H 2 LFA A 1 306 21 LFA LFA . 
I 2 LFA A 1 307 22 LFA LFA . 
J 2 LFA A 1 308 23 LFA LFA . 
K 2 LFA A 1 309 29 LFA LFA . 
L 2 LFA A 1 310 30 LFA LFA . 
M 2 LFA A 1 311 31 LFA LFA . 
N 2 LFA A 1 312 33 LFA LFA . 
O 2 LFA A 1 313 34 LFA LFA . 
P 3 OLB A 1 314 2 OLB OLB . 
Q 4 OLC A 1 315 3 OLC OLC . 
R 4 OLC A 1 316 4 OLC OLC . 
S 2 LFA B 1 301 4 LFA LFA . 
T 2 LFA B 1 302 13 LFA LFA . 
U 2 LFA B 1 303 14 LFA LFA . 
V 2 LFA B 1 304 15 LFA LFA . 
W 2 LFA B 1 305 17 LFA LFA . 
X 2 LFA B 1 306 18 LFA LFA . 
Y 2 LFA B 1 307 20 LFA LFA . 
Z 2 LFA B 1 308 24 LFA LFA . 
AA 2 LFA B 1 309 25 LFA LFA . 
BA 2 LFA B 1 310 26 LFA LFA . 
CA 2 LFA B 1 311 27 LFA LFA . 
DA 2 LFA B 1 312 28 LFA LFA . 
EA 2 LFA B 1 313 32 LFA LFA . 
FA 3 OLB B 1 314 1 OLB OLB . 
GA 4 OLC B 1 315 1 OLC OLC . 
HA 4 OLC B 1 316 2 OLC OLC . 
IA 5 HOH A 1 401 105 HOH HOH . 
IA 5 HOH A 2 402 77 HOH HOH . 
IA 5 HOH A 3 403 142 HOH HOH . 
IA 5 HOH A 4 404 116 HOH HOH . 
IA 5 HOH A 5 405 146 HOH HOH . 
IA 5 HOH A 6 406 14 HOH HOH . 
IA 5 HOH A 7 407 135 HOH HOH . 
IA 5 HOH A 8 408 41 HOH HOH . 
IA 5 HOH A 9 409 8 HOH HOH . 
IA 5 HOH A 10 410 16 HOH HOH . 
IA 5 HOH A 11 411 63 HOH HOH . 
IA 5 HOH A 12 412 93 HOH HOH . 
IA 5 HOH A 13 413 156 HOH HOH . 
IA 5 HOH A 14 414 70 HOH HOH . 
IA 5 HOH A 15 415 34 HOH HOH . 
IA 5 HOH A 16 416 61 HOH HOH . 
IA 5 HOH A 17 417 163 HOH HOH . 
IA 5 HOH A 18 418 69 HOH HOH . 
IA 5 HOH A 19 419 17 HOH HOH . 
IA 5 HOH A 20 420 108 HOH HOH . 
IA 5 HOH A 21 421 158 HOH HOH . 
IA 5 HOH A 22 422 94 HOH HOH . 
IA 5 HOH A 23 423 62 HOH HOH . 
IA 5 HOH A 24 424 143 HOH HOH . 
IA 5 HOH A 25 425 13 HOH HOH . 
IA 5 HOH A 26 426 133 HOH HOH . 
IA 5 HOH A 27 427 159 HOH HOH . 
IA 5 HOH A 28 428 136 HOH HOH . 
IA 5 HOH A 29 429 65 HOH HOH . 
IA 5 HOH A 30 430 112 HOH HOH . 
IA 5 HOH A 31 431 27 HOH HOH . 
IA 5 HOH A 32 432 66 HOH HOH . 
IA 5 HOH A 33 433 12 HOH HOH . 
IA 5 HOH A 34 434 60 HOH HOH . 
IA 5 HOH A 35 435 38 HOH HOH . 
IA 5 HOH A 36 436 32 HOH HOH . 
IA 5 HOH A 37 437 122 HOH HOH . 
IA 5 HOH A 38 438 15 HOH HOH . 
IA 5 HOH A 39 439 98 HOH HOH . 
IA 5 HOH A 40 440 7 HOH HOH . 
IA 5 HOH A 41 441 75 HOH HOH . 
IA 5 HOH A 42 442 50 HOH HOH . 
IA 5 HOH A 43 443 21 HOH HOH . 
IA 5 HOH A 44 444 147 HOH HOH . 
IA 5 HOH A 45 445 71 HOH HOH . 
IA 5 HOH A 46 446 132 HOH HOH . 
IA 5 HOH A 47 447 155 HOH HOH . 
IA 5 HOH A 48 448 130 HOH HOH . 
IA 5 HOH A 49 449 40 HOH HOH . 
IA 5 HOH A 50 450 2 HOH HOH . 
IA 5 HOH A 51 451 37 HOH HOH . 
IA 5 HOH A 52 452 3 HOH HOH . 
IA 5 HOH A 53 453 56 HOH HOH . 
IA 5 HOH A 54 454 153 HOH HOH . 
IA 5 HOH A 55 455 24 HOH HOH . 
IA 5 HOH A 56 456 128 HOH HOH . 
IA 5 HOH A 57 457 96 HOH HOH . 
IA 5 HOH A 58 458 124 HOH HOH . 
IA 5 HOH A 59 459 74 HOH HOH . 
IA 5 HOH A 60 460 67 HOH HOH . 
IA 5 HOH A 61 461 36 HOH HOH . 
IA 5 HOH A 62 462 59 HOH HOH . 
IA 5 HOH A 63 463 72 HOH HOH . 
IA 5 HOH A 64 464 97 HOH HOH . 
IA 5 HOH A 65 465 42 HOH HOH . 
IA 5 HOH A 66 466 46 HOH HOH . 
IA 5 HOH A 67 467 109 HOH HOH . 
IA 5 HOH A 68 468 123 HOH HOH . 
IA 5 HOH A 69 469 113 HOH HOH . 
IA 5 HOH A 70 470 106 HOH HOH . 
IA 5 HOH A 71 471 127 HOH HOH . 
IA 5 HOH A 72 472 160 HOH HOH . 
IA 5 HOH A 73 473 68 HOH HOH . 
IA 5 HOH A 74 474 64 HOH HOH . 
IA 5 HOH A 75 475 154 HOH HOH . 
IA 5 HOH A 76 476 111 HOH HOH . 
IA 5 HOH A 77 477 137 HOH HOH . 
IA 5 HOH A 78 478 43 HOH HOH . 
IA 5 HOH A 79 479 51 HOH HOH . 
IA 5 HOH A 80 480 92 HOH HOH . 
IA 5 HOH A 81 481 102 HOH HOH . 
IA 5 HOH A 82 482 134 HOH HOH . 
IA 5 HOH A 83 483 110 HOH HOH . 
IA 5 HOH A 84 484 73 HOH HOH . 
JA 5 HOH B 1 401 101 HOH HOH . 
JA 5 HOH B 2 402 79 HOH HOH . 
JA 5 HOH B 3 403 26 HOH HOH . 
JA 5 HOH B 4 404 22 HOH HOH . 
JA 5 HOH B 5 405 95 HOH HOH . 
JA 5 HOH B 6 406 89 HOH HOH . 
JA 5 HOH B 7 407 157 HOH HOH . 
JA 5 HOH B 8 408 20 HOH HOH . 
JA 5 HOH B 9 409 48 HOH HOH . 
JA 5 HOH B 10 410 148 HOH HOH . 
JA 5 HOH B 11 411 100 HOH HOH . 
JA 5 HOH B 12 412 141 HOH HOH . 
JA 5 HOH B 13 413 6 HOH HOH . 
JA 5 HOH B 14 414 126 HOH HOH . 
JA 5 HOH B 15 415 19 HOH HOH . 
JA 5 HOH B 16 416 29 HOH HOH . 
JA 5 HOH B 17 417 23 HOH HOH . 
JA 5 HOH B 18 418 115 HOH HOH . 
JA 5 HOH B 19 419 86 HOH HOH . 
JA 5 HOH B 20 420 84 HOH HOH . 
JA 5 HOH B 21 421 149 HOH HOH . 
JA 5 HOH B 22 422 88 HOH HOH . 
JA 5 HOH B 23 423 162 HOH HOH . 
JA 5 HOH B 24 424 99 HOH HOH . 
JA 5 HOH B 25 425 39 HOH HOH . 
JA 5 HOH B 26 426 87 HOH HOH . 
JA 5 HOH B 27 427 131 HOH HOH . 
JA 5 HOH B 28 428 103 HOH HOH . 
JA 5 HOH B 29 429 55 HOH HOH . 
JA 5 HOH B 30 430 49 HOH HOH . 
JA 5 HOH B 31 431 78 HOH HOH . 
JA 5 HOH B 32 432 4 HOH HOH . 
JA 5 HOH B 33 433 90 HOH HOH . 
JA 5 HOH B 34 434 25 HOH HOH . 
JA 5 HOH B 35 435 85 HOH HOH . 
JA 5 HOH B 36 436 18 HOH HOH . 
JA 5 HOH B 37 437 57 HOH HOH . 
JA 5 HOH B 38 438 9 HOH HOH . 
JA 5 HOH B 39 439 120 HOH HOH . 
JA 5 HOH B 40 440 11 HOH HOH . 
JA 5 HOH B 41 441 31 HOH HOH . 
JA 5 HOH B 42 442 35 HOH HOH . 
JA 5 HOH B 43 443 114 HOH HOH . 
JA 5 HOH B 44 444 117 HOH HOH . 
JA 5 HOH B 45 445 125 HOH HOH . 
JA 5 HOH B 46 446 118 HOH HOH . 
JA 5 HOH B 47 447 150 HOH HOH . 
JA 5 HOH B 48 448 151 HOH HOH . 
JA 5 HOH B 49 449 30 HOH HOH . 
JA 5 HOH B 50 450 33 HOH HOH . 
JA 5 HOH B 51 451 5 HOH HOH . 
JA 5 HOH B 52 452 1 HOH HOH . 
JA 5 HOH B 53 453 82 HOH HOH . 
JA 5 HOH B 54 454 139 HOH HOH . 
JA 5 HOH B 55 455 107 HOH HOH . 
JA 5 HOH B 56 456 28 HOH HOH . 
JA 5 HOH B 57 457 80 HOH HOH . 
JA 5 HOH B 58 458 91 HOH HOH . 
JA 5 HOH B 59 459 104 HOH HOH . 
JA 5 HOH B 60 460 54 HOH HOH . 
JA 5 HOH B 61 461 58 HOH HOH . 
JA 5 HOH B 62 462 47 HOH HOH . 
JA 5 HOH B 63 463 119 HOH HOH . 
JA 5 HOH B 64 464 129 HOH HOH . 
JA 5 HOH B 65 465 152 HOH HOH . 
JA 5 HOH B 66 466 53 HOH HOH . 
JA 5 HOH B 67 467 83 HOH HOH . 
JA 5 HOH B 68 468 81 HOH HOH . 
JA 5 HOH B 69 469 140 HOH HOH . 
JA 5 HOH B 70 470 144 HOH HOH . 
JA 5 HOH B 71 471 161 HOH HOH . 
JA 5 HOH B 72 472 52 HOH HOH . 
JA 5 HOH B 73 473 138 HOH HOH . 
JA 5 HOH B 74 474 145 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OLB . . . P 3 5.305 13.277 3.687 1 43.99 ? C1 OLB 314 A 1 
HETATM 2 C C2 OLB . . . P 3 5.999 12.817 2.439 1 45.5 ? C2 OLB 314 A 1 
HETATM 3 O O19 OLB . . . P 3 4.343 14.017 3.593 1 64.97 ? O19 OLB 314 A 1 
HETATM 4 O O20 OLB . . . P 3 5.751 12.881 5.016 1 49.83 ? O20 OLB 314 A 1 
HETATM 5 C C21 OLB . . . P 3 5.249 13.555 6.167 1 41.01 ? C21 OLB 314 A 1 
HETATM 6 C C22 OLB . . . P 3 6.131 13.177 7.35 1 44.39 ? C22 OLB 314 A 1 
HETATM 7 O O23 OLB . . . P 3 5.965 14.026 8.497 1 29.07 ? O23 OLB 314 A 1 
HETATM 8 C C24 OLB . . . P 3 5.693 11.815 7.776 1 41.99 ? C24 OLB 314 A 1 
HETATM 9 O O25 OLB . . . P 3 4.81 12.056 8.845 1 30.26 ? O25 OLB 314 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           9 
#