data_7AVO # _model_server_result.job_id JZKrCMDC7LXTon9k74qlkw _model_server_result.datetime_utc '2024-11-13 04:27:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7avo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":305}' # _entry.id 7AVO # _exptl.entry_id 7AVO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.75 _cell.angle_gamma 90 _cell.entry_id 7AVO _cell.length_a 40.688 _cell.length_b 102.009 _cell.length_c 56.601 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AVO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id 'gel filtration' monomeric 1 author_defined_assembly 1 'gel filtration' monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,CA 1 1 B,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,DA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 199 A ASN 199 1_555 A N LYR 200 A LYR 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C LYR 200 A LYR 200 1_555 A N VAL 201 A VAL 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 B C ASN 199 B ASN 199 1_555 B N LYR 200 B LYR 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale4 B C LYR 200 B LYR 200 1_555 B N VAL 201 B VAL 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 194 n n C1 H11 LFA sing 195 n n C1 H12 LFA sing 196 n n C1 H13 LFA sing 197 n n C2 C3 LFA sing 198 n n C2 H21 LFA sing 199 n n C2 H22 LFA sing 200 n n C3 C4 LFA sing 201 n n C3 H31 LFA sing 202 n n C3 H32 LFA sing 203 n n C4 C5 LFA sing 204 n n C4 H41 LFA sing 205 n n C4 H42 LFA sing 206 n n C5 C6 LFA sing 207 n n C5 H51 LFA sing 208 n n C5 H52 LFA sing 209 n n C6 C7 LFA sing 210 n n C6 H61 LFA sing 211 n n C6 H62 LFA sing 212 n n C7 C8 LFA sing 213 n n C7 H71 LFA sing 214 n n C7 H72 LFA sing 215 n n C8 C9 LFA sing 216 n n C8 H81 LFA sing 217 n n C8 H82 LFA sing 218 n n C9 C10 LFA sing 219 n n C9 H91 LFA sing 220 n n C9 H92 LFA sing 221 n n C10 C11 LFA sing 222 n n C10 H101 LFA sing 223 n n C10 H102 LFA sing 224 n n C11 C12 LFA sing 225 n n C11 H111 LFA sing 226 n n C11 H112 LFA sing 227 n n C12 C13 LFA sing 228 n n C12 H121 LFA sing 229 n n C12 H122 LFA sing 230 n n C13 C14 LFA sing 231 n n C13 H131 LFA sing 232 n n C13 H132 LFA sing 233 n n C14 C15 LFA sing 234 n n C14 H141 LFA sing 235 n n C14 H142 LFA sing 236 n n C15 C16 LFA sing 237 n n C15 H151 LFA sing 238 n n C15 H152 LFA sing 239 n n C16 C17 LFA sing 240 n n C16 H161 LFA sing 241 n n C16 H162 LFA sing 242 n n C17 C18 LFA sing 243 n n C17 H171 LFA sing 244 n n C17 H172 LFA sing 245 n n C18 C19 LFA sing 246 n n C18 H181 LFA sing 247 n n C18 H182 LFA sing 248 n n C19 C20 LFA sing 249 n n C19 H191 LFA sing 250 n n C19 H192 LFA sing 251 n n C20 H201 LFA sing 252 n n C20 H202 LFA sing 253 n n C20 H203 LFA sing 254 n n # _atom_sites.entry_id 7AVO _atom_sites.fract_transf_matrix[1][1] 0.024577 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004224 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009803 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LFA A 1 301 1 LFA LFA . D 2 LFA A 1 302 4 LFA LFA . E 2 LFA A 1 303 5 LFA LFA . F 2 LFA A 1 304 9 LFA LFA . G 2 LFA A 1 305 10 LFA LFA . H 2 LFA A 1 306 12 LFA LFA . I 2 LFA A 1 307 17 LFA LFA . J 2 LFA A 1 308 18 LFA LFA . K 2 LFA A 1 309 19 LFA LFA . L 2 LFA A 1 310 21 LFA LFA . M 2 LFA A 1 311 22 LFA LFA . N 2 LFA A 1 312 24 LFA LFA . O 3 OLB A 1 313 1 OLB OLB . P 2 LFA B 1 301 2 LFA LFA . Q 2 LFA B 1 302 3 LFA LFA . R 2 LFA B 1 303 6 LFA LFA . S 2 LFA B 1 304 7 LFA LFA . T 2 LFA B 1 305 8 LFA LFA . U 2 LFA B 1 306 11 LFA LFA . V 2 LFA B 1 307 13 LFA LFA . W 2 LFA B 1 308 14 LFA LFA . X 2 LFA B 1 309 15 LFA LFA . Y 2 LFA B 1 310 16 LFA LFA . Z 2 LFA B 1 311 20 LFA LFA . AA 2 LFA B 1 312 23 LFA LFA . BA 4 OLC B 1 313 1 OLC OLC . CA 5 HOH A 1 401 44 HOH HOH . CA 5 HOH A 2 402 51 HOH HOH . CA 5 HOH A 3 403 52 HOH HOH . CA 5 HOH A 4 404 40 HOH HOH . CA 5 HOH A 5 405 59 HOH HOH . CA 5 HOH A 6 406 16 HOH HOH . CA 5 HOH A 7 407 42 HOH HOH . CA 5 HOH A 8 408 19 HOH HOH . CA 5 HOH A 9 409 89 HOH HOH . CA 5 HOH A 10 410 36 HOH HOH . CA 5 HOH A 11 411 102 HOH HOH . CA 5 HOH A 12 412 99 HOH HOH . CA 5 HOH A 13 413 50 HOH HOH . CA 5 HOH A 14 414 14 HOH HOH . CA 5 HOH A 15 415 41 HOH HOH . CA 5 HOH A 16 416 29 HOH HOH . CA 5 HOH A 17 417 6 HOH HOH . CA 5 HOH A 18 418 71 HOH HOH . CA 5 HOH A 19 419 60 HOH HOH . CA 5 HOH A 20 420 100 HOH HOH . CA 5 HOH A 21 421 43 HOH HOH . CA 5 HOH A 22 422 72 HOH HOH . CA 5 HOH A 23 423 2 HOH HOH . CA 5 HOH A 24 424 114 HOH HOH . CA 5 HOH A 25 425 10 HOH HOH . CA 5 HOH A 26 426 11 HOH HOH . CA 5 HOH A 27 427 12 HOH HOH . CA 5 HOH A 28 428 23 HOH HOH . CA 5 HOH A 29 429 26 HOH HOH . CA 5 HOH A 30 430 22 HOH HOH . CA 5 HOH A 31 431 18 HOH HOH . CA 5 HOH A 32 432 54 HOH HOH . CA 5 HOH A 33 433 98 HOH HOH . CA 5 HOH A 34 434 101 HOH HOH . CA 5 HOH A 35 435 47 HOH HOH . CA 5 HOH A 36 436 33 HOH HOH . CA 5 HOH A 37 437 1 HOH HOH . CA 5 HOH A 38 438 70 HOH HOH . CA 5 HOH A 39 439 7 HOH HOH . CA 5 HOH A 40 440 107 HOH HOH . CA 5 HOH A 41 441 75 HOH HOH . CA 5 HOH A 42 442 88 HOH HOH . CA 5 HOH A 43 443 82 HOH HOH . CA 5 HOH A 44 444 117 HOH HOH . CA 5 HOH A 45 445 115 HOH HOH . CA 5 HOH A 46 446 106 HOH HOH . CA 5 HOH A 47 447 25 HOH HOH . CA 5 HOH A 48 448 58 HOH HOH . CA 5 HOH A 49 449 104 HOH HOH . CA 5 HOH A 50 450 93 HOH HOH . CA 5 HOH A 51 451 67 HOH HOH . CA 5 HOH A 52 452 103 HOH HOH . CA 5 HOH A 53 453 49 HOH HOH . CA 5 HOH A 54 454 92 HOH HOH . CA 5 HOH A 55 455 53 HOH HOH . CA 5 HOH A 56 456 24 HOH HOH . DA 5 HOH B 1 401 91 HOH HOH . DA 5 HOH B 2 402 55 HOH HOH . DA 5 HOH B 3 403 79 HOH HOH . DA 5 HOH B 4 404 57 HOH HOH . DA 5 HOH B 5 405 63 HOH HOH . DA 5 HOH B 6 406 30 HOH HOH . DA 5 HOH B 7 407 17 HOH HOH . DA 5 HOH B 8 408 32 HOH HOH . DA 5 HOH B 9 409 90 HOH HOH . DA 5 HOH B 10 410 86 HOH HOH . DA 5 HOH B 11 411 20 HOH HOH . DA 5 HOH B 12 412 95 HOH HOH . DA 5 HOH B 13 413 64 HOH HOH . DA 5 HOH B 14 414 9 HOH HOH . DA 5 HOH B 15 415 45 HOH HOH . DA 5 HOH B 16 416 112 HOH HOH . DA 5 HOH B 17 417 39 HOH HOH . DA 5 HOH B 18 418 78 HOH HOH . DA 5 HOH B 19 419 62 HOH HOH . DA 5 HOH B 20 420 105 HOH HOH . DA 5 HOH B 21 421 21 HOH HOH . DA 5 HOH B 22 422 4 HOH HOH . DA 5 HOH B 23 423 38 HOH HOH . DA 5 HOH B 24 424 46 HOH HOH . DA 5 HOH B 25 425 5 HOH HOH . DA 5 HOH B 26 426 56 HOH HOH . DA 5 HOH B 27 427 74 HOH HOH . DA 5 HOH B 28 428 34 HOH HOH . DA 5 HOH B 29 429 13 HOH HOH . DA 5 HOH B 30 430 111 HOH HOH . DA 5 HOH B 31 431 31 HOH HOH . DA 5 HOH B 32 432 8 HOH HOH . DA 5 HOH B 33 433 113 HOH HOH . DA 5 HOH B 34 434 68 HOH HOH . DA 5 HOH B 35 435 87 HOH HOH . DA 5 HOH B 36 436 28 HOH HOH . DA 5 HOH B 37 437 48 HOH HOH . DA 5 HOH B 38 438 94 HOH HOH . DA 5 HOH B 39 439 109 HOH HOH . DA 5 HOH B 40 440 3 HOH HOH . DA 5 HOH B 41 441 27 HOH HOH . DA 5 HOH B 42 442 15 HOH HOH . DA 5 HOH B 43 443 77 HOH HOH . DA 5 HOH B 44 444 76 HOH HOH . DA 5 HOH B 45 445 108 HOH HOH . DA 5 HOH B 46 446 81 HOH HOH . DA 5 HOH B 47 447 61 HOH HOH . DA 5 HOH B 48 448 73 HOH HOH . DA 5 HOH B 49 449 66 HOH HOH . DA 5 HOH B 50 450 69 HOH HOH . DA 5 HOH B 51 451 85 HOH HOH . DA 5 HOH B 52 452 80 HOH HOH . DA 5 HOH B 53 453 65 HOH HOH . DA 5 HOH B 54 454 96 HOH HOH . DA 5 HOH B 55 455 116 HOH HOH . DA 5 HOH B 56 456 97 HOH HOH . DA 5 HOH B 57 457 110 HOH HOH . DA 5 HOH B 58 458 35 HOH HOH . DA 5 HOH B 59 459 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . G 2 0.105 2.351 18.63 1 51.25 ? C1 LFA 305 A 1 HETATM 2 C C2 LFA . . . G 2 0.532 1.108 17.836 1 44.13 ? C2 LFA 305 A 1 HETATM 3 C C3 LFA . . . G 2 -0.455 -0.067 17.944 1 38.48 ? C3 LFA 305 A 1 HETATM 4 C C4 LFA . . . G 2 0.318 -1.401 18.023 1 33.84 ? C4 LFA 305 A 1 HETATM 5 C C5 LFA . . . G 2 -0.326 -2.534 17.198 1 37.49 ? C5 LFA 305 A 1 HETATM 6 C C6 LFA . . . G 2 -0.898 -3.64 18.074 1 41.03 ? C6 LFA 305 A 1 HETATM 7 C C7 LFA . . . G 2 -0.487 -5.063 17.666 1 34.76 ? C7 LFA 305 A 1 HETATM 8 C C8 LFA . . . G 2 -1.641 -6.007 17.985 1 36.97 ? C8 LFA 305 A 1 HETATM 9 C C9 LFA . . . G 2 -2.79 -5.752 17.025 1 38.07 ? C9 LFA 305 A 1 HETATM 10 C C10 LFA . . . G 2 -3.917 -6.753 17.189 1 37.2 ? C10 LFA 305 A 1 HETATM 11 C C11 LFA . . . G 2 -5.064 -6.332 16.274 1 42.41 ? C11 LFA 305 A 1 HETATM 12 C C12 LFA . . . G 2 -6.329 -7.092 16.63 1 50.38 ? C12 LFA 305 A 1 HETATM 13 C C13 LFA . . . G 2 -6.574 -8.257 15.679 1 49.92 ? C13 LFA 305 A 1 HETATM 14 C C14 LFA . . . G 2 -7.35 -9.366 16.391 1 44.15 ? C14 LFA 305 A 1 HETATM 15 C C15 LFA . . . G 2 -6.597 -9.839 17.638 1 44.87 ? C15 LFA 305 A 1 HETATM 16 C C16 LFA . . . G 2 -7.548 -10.428 18.682 1 36.16 ? C16 LFA 305 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 16 #