data_7AWQ # _model_server_result.job_id OmfgOzjjwEfLhObkHT5v2w _model_server_result.datetime_utc '2024-12-02 17:10:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7awq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 7AWQ # _exptl.entry_id 7AWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 422.475 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7AWQ _cell.length_a 124 _cell.length_b 124 _cell.length_c 90.81 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 62 -107.38715 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 124 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O TYR 127 A TYR 127 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc2 A OG1 THR 130 A THR 130 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc3 A OG1 THR 131 A THR 131 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc4 A O THR 376 A THR 376 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc5 A OD1 ASN 378 A ASN 378 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc6 A OD1 ASP 380 A ASP 380 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc7 A O SER 417 A SER 417 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc8 A O ALA 420 A ALA 420 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? # _chem_comp.formula 'C27 H22 N2 O3' _chem_comp.formula_weight 422.475 _chem_comp.id 6Z6 _chem_comp.mon_nstd_flag . _chem_comp.name 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O 6Z6 sing 1 n n O C1 6Z6 sing 2 n n C1 C2 6Z6 doub 3 n y C1 C6 6Z6 sing 4 n y C2 C3 6Z6 sing 5 n y C6 C5 6Z6 doub 6 n y C3 C4 6Z6 doub 7 n y C5 C4 6Z6 sing 8 n y C4 C7 6Z6 sing 9 n n N1 C16 6Z6 trip 10 n n C16 C15 6Z6 sing 11 n n C7 C15 6Z6 sing 12 n n C7 C8 6Z6 sing 13 n n O1 C9 6Z6 doub 14 n n C15 C14 6Z6 doub 15 n n C8 C9 6Z6 sing 16 n n C8 C13 6Z6 doub 17 n n C9 C10 6Z6 sing 18 n n C14 N 6Z6 sing 19 n n C14 O2 6Z6 sing 20 n n C24 C25 6Z6 doub 21 n y C24 C23 6Z6 sing 22 n y C13 O2 6Z6 sing 23 n n C13 C12 6Z6 sing 24 n n C10 C11 6Z6 sing 25 n n C25 C26 6Z6 sing 26 n y C23 C22 6Z6 doub 27 n y C12 C11 6Z6 sing 28 n n C11 C17 6Z6 sing 29 n n C26 C17 6Z6 doub 30 n y C26 C21 6Z6 sing 31 n y C17 C18 6Z6 sing 32 n y C22 C21 6Z6 sing 33 n y C21 C20 6Z6 doub 34 n y C18 C19 6Z6 doub 35 n y C20 C19 6Z6 sing 36 n y C2 H1 6Z6 sing 37 n n C5 H2 6Z6 sing 38 n n C6 H3 6Z6 sing 39 n n N H4 6Z6 sing 40 n n N H5 6Z6 sing 41 n n C3 H6 6Z6 sing 42 n n C H7 6Z6 sing 43 n n C H8 6Z6 sing 44 n n C H9 6Z6 sing 45 n n C10 H10 6Z6 sing 46 n n C10 H11 6Z6 sing 47 n n C11 H12 6Z6 sing 48 n n C12 H13 6Z6 sing 49 n n C12 H14 6Z6 sing 50 n n C18 H15 6Z6 sing 51 n n C19 H16 6Z6 sing 52 n n C20 H17 6Z6 sing 53 n n C22 H18 6Z6 sing 54 n n C23 H19 6Z6 sing 55 n n C24 H20 6Z6 sing 56 n n C25 H21 6Z6 sing 57 n n C7 H22 6Z6 sing 58 n n # _atom_sites.entry_id 7AWQ _atom_sites.fract_transf_matrix[1][1] 0.008065 _atom_sites.fract_transf_matrix[1][2] 0.004656 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009312 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 601 500 NA NA . C 2 NA A 1 602 501 NA NA . D 3 ASP A 1 603 502 ASP ASP . E 4 6Z6 A 1 604 503 6Z6 UCP . F 5 BA A 1 605 504 BA BA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 6Z6 . . . E 4 41.667 -21.128 -1.779 1 82.52 ? N1 6Z6 604 A 1 HETATM 2 C C2 6Z6 . . . E 4 43.899 -17.76 1.824 1 88.55 ? C2 6Z6 604 A 1 HETATM 3 O O2 6Z6 . . . E 4 45.83 -19.84 -3.748 1 77.89 ? O2 6Z6 604 A 1 HETATM 4 C C4 6Z6 . . . E 4 44.327 -18.429 -0.502 1 85.26 ? C4 6Z6 604 A 1 HETATM 5 C C5 6Z6 . . . E 4 45.568 -18.978 -0.087 1 82.02 ? C5 6Z6 604 A 1 HETATM 6 C C6 6Z6 . . . E 4 45.99 -18.92 1.246 1 81.38 ? C6 6Z6 604 A 1 HETATM 7 O O1 6Z6 . . . E 4 44.431 -15.537 -2.093 1 93.24 ? O1 6Z6 604 A 1 HETATM 8 C C9 6Z6 . . . E 4 45.22 -16.266 -2.689 1 89.17 ? C9 6Z6 604 A 1 HETATM 9 C C8 6Z6 . . . E 4 45.067 -17.757 -2.759 1 84.78 ? C8 6Z6 604 A 1 HETATM 10 C C13 6Z6 . . . E 4 45.915 -18.484 -3.548 1 80.74 ? C13 6Z6 604 A 1 HETATM 11 C C14 6Z6 . . . E 4 44.782 -20.515 -3.157 1 78.22 ? C14 6Z6 604 A 1 HETATM 12 N N 6Z6 . . . E 4 44.812 -21.821 -3.564 1 75.21 ? N 6Z6 604 A 1 HETATM 13 C C15 6Z6 . . . E 4 43.817 -19.885 -2.403 1 81.6 ? C15 6Z6 604 A 1 HETATM 14 C C16 6Z6 . . . E 4 42.633 -20.556 -2.053 1 81.86 ? C16 6Z6 604 A 1 HETATM 15 C C7 6Z6 . . . E 4 43.943 -18.433 -1.98 1 85.62 ? C7 6Z6 604 A 1 HETATM 16 C C3 6Z6 . . . E 4 43.49 -17.832 0.467 1 88.89 ? C3 6Z6 604 A 1 HETATM 17 C C1 6Z6 . . . E 4 45.166 -18.302 2.197 1 84.95 ? C1 6Z6 604 A 1 HETATM 18 O O 6Z6 . . . E 4 45.543 -18.184 3.522 1 84.16 ? O 6Z6 604 A 1 HETATM 19 C C 6Z6 . . . E 4 46.564 -17.237 3.822 1 83.19 ? C 6Z6 604 A 1 HETATM 20 C C10 6Z6 . . . E 4 46.395 -15.636 -3.449 1 88.99 ? C10 6Z6 604 A 1 HETATM 21 C C11 6Z6 . . . E 4 46.915 -16.452 -4.646 1 85.24 ? C11 6Z6 604 A 1 HETATM 22 C C12 6Z6 . . . E 4 47.074 -17.96 -4.327 1 79.84 ? C12 6Z6 604 A 1 HETATM 23 C C17 6Z6 . . . E 4 48.197 -15.898 -5.277 1 84.25 ? C17 6Z6 604 A 1 HETATM 24 C C18 6Z6 . . . E 4 48.053 -15.163 -6.439 1 88 ? C18 6Z6 604 A 1 HETATM 25 C C19 6Z6 . . . E 4 49.168 -14.644 -7.163 1 88.34 ? C19 6Z6 604 A 1 HETATM 26 C C20 6Z6 . . . E 4 50.448 -14.862 -6.723 1 84.66 ? C20 6Z6 604 A 1 HETATM 27 C C21 6Z6 . . . E 4 50.681 -15.606 -5.528 1 79.9 ? C21 6Z6 604 A 1 HETATM 28 C C26 6Z6 . . . E 4 49.572 -16.132 -4.77 1 79.5 ? C26 6Z6 604 A 1 HETATM 29 C C22 6Z6 . . . E 4 52.031 -15.835 -5.113 1 77.02 ? C22 6Z6 604 A 1 HETATM 30 C C23 6Z6 . . . E 4 52.299 -16.565 -3.981 1 74.53 ? C23 6Z6 604 A 1 HETATM 31 C C24 6Z6 . . . E 4 51.218 -17.088 -3.202 1 73.97 ? C24 6Z6 604 A 1 HETATM 32 C C25 6Z6 . . . E 4 49.908 -16.873 -3.579 1 76.2 ? C25 6Z6 604 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 60 _model_server_stats.query_time_ms 458 _model_server_stats.encode_time_ms 43 _model_server_stats.element_count 32 #