data_7AWS # _model_server_result.job_id gf73iQRn7i0w64mnmSx0uw _model_server_result.datetime_utc '2025-08-14 08:39:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aws # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7AWS # _exptl.entry_id 7AWS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 372.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[[(2-bromoethylamino)-(ethylamino)phosphoryl]oxymethyl]-1-methyl-~{N},~{N}-bis(oxidanyl)imidazol-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.75 _cell.angle_gamma 90 _cell.entry_id 7AWS _cell.length_a 113.05 _cell.length_b 53.039 _cell.length_c 44.782 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AWS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 145 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 145 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C20 _struct_conn.ptnr2_label_comp_id S8E _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id S8E _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id B _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id B _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.806 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C9 H19 Br N5 O4 P' _chem_comp.formula_weight 372.156 _chem_comp.id S8E _chem_comp.mon_nstd_flag . _chem_comp.name 5-[[(2-bromoethylamino)-(ethylamino)phosphoryl]oxymethyl]-1-methyl-~{N},~{N}-bis(oxidanyl)imidazol-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C19 S8E sing 286 n n C19 N18 S8E sing 287 n n BR1 C16 S8E sing 288 n n N18 P12 S8E sing 289 n n C16 C15 S8E sing 290 n n C15 N14 S8E sing 291 n n O11 P12 S8E sing 292 n n O11 C10 S8E sing 293 n n P12 N14 S8E sing 294 n n P12 O13 S8E doub 295 n n O09 N07 S8E sing 296 n n C04 N05 S8E sing 297 n y C04 C03 S8E doub 298 n y N05 C06 S8E doub 299 n y C03 C10 S8E sing 300 n n C03 N02 S8E sing 301 n y C06 N02 S8E sing 302 n y C06 N07 S8E sing 303 n n N02 C01 S8E sing 304 n n N07 O08 S8E sing 305 n n C10 H102 S8E sing 306 n n C10 H101 S8E sing 307 n n C15 H152 S8E sing 308 n n C15 H151 S8E sing 309 n n C20 H203 S8E sing 310 n n C20 H1 S8E sing 311 n n C20 H201 S8E sing 312 n n C01 H012 S8E sing 313 n n C01 H013 S8E sing 314 n n C01 H011 S8E sing 315 n n C04 H041 S8E sing 316 n n C16 H161 S8E sing 317 n n C16 H162 S8E sing 318 n n C19 H191 S8E sing 319 n n C19 H192 S8E sing 320 n n N14 H141 S8E sing 321 n n N18 H181 S8E sing 322 n n O08 H081 S8E sing 323 n n O09 H091 S8E sing 324 n n # _atom_sites.entry_id 7AWS _atom_sites.fract_transf_matrix[1][1] 0.008846 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002002 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018854 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022895 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 S8E A 1 401 401 S8E LIG . C 3 DMS A 1 402 501 DMS DMS . D 3 DMS A 1 403 601 DMS DMS . E 3 DMS A 1 404 701 DMS DMS . F 3 DMS A 1 405 702 DMS DMS . G 3 DMS A 1 406 703 DMS DMS . H 4 CL A 1 407 1 CL CL . I 5 HOH A 1 501 53 HOH HOH . I 5 HOH A 2 502 63 HOH HOH . I 5 HOH A 3 503 79 HOH HOH . I 5 HOH A 4 504 74 HOH HOH . I 5 HOH A 5 505 42 HOH HOH . I 5 HOH A 6 506 112 HOH HOH . I 5 HOH A 7 507 61 HOH HOH . I 5 HOH A 8 508 80 HOH HOH . I 5 HOH A 9 509 51 HOH HOH . I 5 HOH A 10 510 137 HOH HOH . I 5 HOH A 11 511 39 HOH HOH . I 5 HOH A 12 512 94 HOH HOH . I 5 HOH A 13 513 120 HOH HOH . I 5 HOH A 14 514 41 HOH HOH . I 5 HOH A 15 515 6 HOH HOH . I 5 HOH A 16 516 62 HOH HOH . I 5 HOH A 17 517 85 HOH HOH . I 5 HOH A 18 518 150 HOH HOH . I 5 HOH A 19 519 45 HOH HOH . I 5 HOH A 20 520 49 HOH HOH . I 5 HOH A 21 521 5 HOH HOH . I 5 HOH A 22 522 126 HOH HOH . I 5 HOH A 23 523 29 HOH HOH . I 5 HOH A 24 524 128 HOH HOH . I 5 HOH A 25 525 97 HOH HOH . I 5 HOH A 26 526 35 HOH HOH . I 5 HOH A 27 527 4 HOH HOH . I 5 HOH A 28 528 9 HOH HOH . I 5 HOH A 29 529 125 HOH HOH . I 5 HOH A 30 530 19 HOH HOH . I 5 HOH A 31 531 65 HOH HOH . I 5 HOH A 32 532 2 HOH HOH . I 5 HOH A 33 533 101 HOH HOH . I 5 HOH A 34 534 66 HOH HOH . I 5 HOH A 35 535 46 HOH HOH . I 5 HOH A 36 536 50 HOH HOH . I 5 HOH A 37 537 15 HOH HOH . I 5 HOH A 38 538 96 HOH HOH . I 5 HOH A 39 539 25 HOH HOH . I 5 HOH A 40 540 44 HOH HOH . I 5 HOH A 41 541 68 HOH HOH . I 5 HOH A 42 542 95 HOH HOH . I 5 HOH A 43 543 34 HOH HOH . I 5 HOH A 44 544 93 HOH HOH . I 5 HOH A 45 545 104 HOH HOH . I 5 HOH A 46 546 58 HOH HOH . I 5 HOH A 47 547 37 HOH HOH . I 5 HOH A 48 548 91 HOH HOH . I 5 HOH A 49 549 59 HOH HOH . I 5 HOH A 50 550 32 HOH HOH . I 5 HOH A 51 551 40 HOH HOH . I 5 HOH A 52 552 26 HOH HOH . I 5 HOH A 53 553 105 HOH HOH . I 5 HOH A 54 554 117 HOH HOH . I 5 HOH A 55 555 12 HOH HOH . I 5 HOH A 56 556 3 HOH HOH . I 5 HOH A 57 557 43 HOH HOH . I 5 HOH A 58 558 57 HOH HOH . I 5 HOH A 59 559 148 HOH HOH . I 5 HOH A 60 560 118 HOH HOH . I 5 HOH A 61 561 123 HOH HOH . I 5 HOH A 62 562 69 HOH HOH . I 5 HOH A 63 563 71 HOH HOH . I 5 HOH A 64 564 127 HOH HOH . I 5 HOH A 65 565 7 HOH HOH . I 5 HOH A 66 566 84 HOH HOH . I 5 HOH A 67 567 38 HOH HOH . I 5 HOH A 68 568 22 HOH HOH . I 5 HOH A 69 569 52 HOH HOH . I 5 HOH A 70 570 98 HOH HOH . I 5 HOH A 71 571 99 HOH HOH . I 5 HOH A 72 572 14 HOH HOH . I 5 HOH A 73 573 54 HOH HOH . I 5 HOH A 74 574 103 HOH HOH . I 5 HOH A 75 575 111 HOH HOH . I 5 HOH A 76 576 102 HOH HOH . I 5 HOH A 77 577 24 HOH HOH . I 5 HOH A 78 578 106 HOH HOH . I 5 HOH A 79 579 21 HOH HOH . I 5 HOH A 80 580 10 HOH HOH . I 5 HOH A 81 581 114 HOH HOH . I 5 HOH A 82 582 33 HOH HOH . I 5 HOH A 83 583 115 HOH HOH . I 5 HOH A 84 584 18 HOH HOH . I 5 HOH A 85 585 13 HOH HOH . I 5 HOH A 86 586 16 HOH HOH . I 5 HOH A 87 587 82 HOH HOH . I 5 HOH A 88 588 56 HOH HOH . I 5 HOH A 89 589 122 HOH HOH . I 5 HOH A 90 590 90 HOH HOH . I 5 HOH A 91 591 100 HOH HOH . I 5 HOH A 92 592 28 HOH HOH . I 5 HOH A 93 593 151 HOH HOH . I 5 HOH A 94 594 138 HOH HOH . I 5 HOH A 95 595 86 HOH HOH . I 5 HOH A 96 596 11 HOH HOH . I 5 HOH A 97 597 139 HOH HOH . I 5 HOH A 98 598 129 HOH HOH . I 5 HOH A 99 599 108 HOH HOH . I 5 HOH A 100 600 77 HOH HOH . I 5 HOH A 101 601 47 HOH HOH . I 5 HOH A 102 602 124 HOH HOH . I 5 HOH A 103 603 17 HOH HOH . I 5 HOH A 104 604 76 HOH HOH . I 5 HOH A 105 605 20 HOH HOH . I 5 HOH A 106 606 107 HOH HOH . I 5 HOH A 107 607 88 HOH HOH . I 5 HOH A 108 608 23 HOH HOH . I 5 HOH A 109 609 8 HOH HOH . I 5 HOH A 110 610 119 HOH HOH . I 5 HOH A 111 611 109 HOH HOH . I 5 HOH A 112 612 83 HOH HOH . I 5 HOH A 113 613 146 HOH HOH . I 5 HOH A 114 614 31 HOH HOH . I 5 HOH A 115 615 78 HOH HOH . I 5 HOH A 116 616 27 HOH HOH . I 5 HOH A 117 617 113 HOH HOH . I 5 HOH A 118 618 135 HOH HOH . I 5 HOH A 119 619 116 HOH HOH . I 5 HOH A 120 620 89 HOH HOH . I 5 HOH A 121 621 48 HOH HOH . I 5 HOH A 122 622 140 HOH HOH . I 5 HOH A 123 623 70 HOH HOH . I 5 HOH A 124 624 141 HOH HOH . I 5 HOH A 125 625 67 HOH HOH . I 5 HOH A 126 626 92 HOH HOH . I 5 HOH A 127 627 149 HOH HOH . I 5 HOH A 128 628 55 HOH HOH . I 5 HOH A 129 629 133 HOH HOH . I 5 HOH A 130 630 143 HOH HOH . I 5 HOH A 131 631 142 HOH HOH . I 5 HOH A 132 632 134 HOH HOH . I 5 HOH A 133 633 36 HOH HOH . I 5 HOH A 134 634 130 HOH HOH . I 5 HOH A 135 635 145 HOH HOH . I 5 HOH A 136 636 60 HOH HOH . I 5 HOH A 137 637 144 HOH HOH . I 5 HOH A 138 638 147 HOH HOH . I 5 HOH A 139 639 136 HOH HOH . I 5 HOH A 140 640 30 HOH HOH . I 5 HOH A 141 641 72 HOH HOH . I 5 HOH A 142 642 81 HOH HOH . I 5 HOH A 143 643 87 HOH HOH . I 5 HOH A 144 644 73 HOH HOH . I 5 HOH A 145 645 131 HOH HOH . I 5 HOH A 146 646 75 HOH HOH . I 5 HOH A 147 647 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 S8E . B . B 2 8.993 0.765 22.62 0.56 33.18 ? C10 S8E 401 A 1 HETATM 2 C C15 S8E . B . B 2 5.089 -0.445 20.938 0.56 34.27 ? C15 S8E 401 A 1 HETATM 3 C C20 S8E . B . B 2 7.738 -2.818 18.452 0.56 23.95 ? C20 S8E 401 A 1 HETATM 4 C C01 S8E . B . B 2 11.814 1.973 22.937 0.56 32.88 ? C01 S8E 401 A 1 HETATM 5 C C03 S8E . B . B 2 10.308 -0.006 22.601 0.56 30.81 ? C03 S8E 401 A 1 HETATM 6 C C04 S8E . B . B 2 10.477 -1.373 22.444 0.56 28.32 ? C04 S8E 401 A 1 HETATM 7 C C06 S8E . B . B 2 12.495 -0.485 22.68 0.56 28.81 ? C06 S8E 401 A 1 HETATM 8 C C16 S8E . B . B 2 5.365 1.056 20.9 0.56 33.66 ? C16 S8E 401 A 1 HETATM 9 C C19 S8E . B . B 2 8.096 -1.788 19.52 0.56 27.59 ? C19 S8E 401 A 1 HETATM 10 N N02 S8E . B . B 2 11.553 0.557 22.753 0.56 32.59 ? N02 S8E 401 A 1 HETATM 11 N N05 S8E . B . B 2 11.835 -1.658 22.497 0.56 32.37 ? N05 S8E 401 A 1 HETATM 12 N N07 S8E . B . B 2 13.929 -0.401 22.793 0.56 27.82 ? N07 S8E 401 A 1 HETATM 13 N N14 S8E . B . B 2 5.712 -1.017 22.112 0.56 35.61 ? N14 S8E 401 A 1 HETATM 14 N N18 S8E . B . B 2 7.85 -2.319 20.85 0.56 31.95 ? N18 S8E 401 A 1 HETATM 15 O O08 S8E . B . B 2 14.518 0.587 23.584 0.56 34.33 ? O08 S8E 401 A 1 HETATM 16 O O09 S8E . B . B 2 14.708 -1.354 22.133 0.56 30.36 ? O09 S8E 401 A 1 HETATM 17 O O11 S8E . B . B 2 8.091 0.202 21.717 0.56 30.81 ? O11 S8E 401 A 1 HETATM 18 O O13 S8E . B . B 2 7.841 -1.717 23.393 0.56 35.72 ? O13 S8E 401 A 1 HETATM 19 P P12 S8E . B . B 2 7.391 -1.241 22.086 0.56 40.45 ? P12 S8E 401 A 1 HETATM 20 BR BR1 S8E . B . B 2 4.066 1.89 19.724 0.56 54.97 ? BR1 S8E 401 A 1 HETATM 21 H H102 S8E . B . B 2 8.627 0.733 23.484 0.56 39.83 ? H102 S8E 401 A 1 HETATM 22 H H101 S8E . B . B 2 9.154 1.659 22.381 0.56 39.83 ? H101 S8E 401 A 1 HETATM 23 H H152 S8E . B . B 2 5.443 -0.848 20.167 0.56 41.15 ? H152 S8E 401 A 1 HETATM 24 H H151 S8E . B . B 2 4.163 -0.592 20.971 0.56 41.15 ? H151 S8E 401 A 1 HETATM 25 H H1 S8E . B . B 2 8.539 -3.188 18.099 0.56 28.76 ? H1 S8E 401 A 1 HETATM 26 H H201 S8E . B . B 2 7.259 -2.391 17.75 0.56 28.76 ? H201 S8E 401 A 1 HETATM 27 H H012 S8E . B . B 2 11.281 2.301 23.636 0.56 39.48 ? H012 S8E 401 A 1 HETATM 28 H H013 S8E . B . B 2 11.611 2.434 22.145 0.56 39.48 ? H013 S8E 401 A 1 HETATM 29 H H011 S8E . B . B 2 12.72 2.098 23.149 0.56 39.48 ? H011 S8E 401 A 1 HETATM 30 H H041 S8E . B . B 2 9.796 -1.993 22.324 0.56 34.01 ? H041 S8E 401 A 1 HETATM 31 H H161 S8E . B . B 2 5.286 1.415 21.764 0.56 40.42 ? H161 S8E 401 A 1 HETATM 32 H H162 S8E . B . B 2 6.232 1.211 20.575 0.56 40.42 ? H162 S8E 401 A 1 HETATM 33 H H191 S8E . B . B 2 7.572 -1.019 19.394 0.56 33.13 ? H191 S8E 401 A 1 HETATM 34 H H192 S8E . B . B 2 9.005 -1.565 19.441 0.56 33.13 ? H192 S8E 401 A 1 HETATM 35 H H141 S8E . B . B 2 5.241 -1.239 22.806 0.56 42.76 ? H141 S8E 401 A 1 HETATM 36 H H181 S8E . B . B 2 7.935 -3.168 21.011 0.56 38.36 ? H181 S8E 401 A 1 HETATM 37 H H081 S8E . B . B 2 14.416 0.385 24.387 0.56 41.22 ? H081 S8E 401 A 1 HETATM 38 H H091 S8E . B . B 2 14.418 -2.113 22.309 0.56 36.46 ? H091 S8E 401 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 38 #