data_7AX8 # _model_server_result.job_id J7IXfrD9KvUpEcF4zrw65A _model_server_result.datetime_utc '2024-11-24 19:01:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ax8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7AX8 # _exptl.entry_id 7AX8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AX8 _cell.length_a 91.959 _cell.length_b 91.959 _cell.length_c 85.533 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AX8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id 'gel filtration' monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_664 -y+1,-x+1,-z-1/2 0 -1 0 -1 0 0 0 0 -1 91.959 91.959 -42.7665 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7AX8 _atom_sites.fract_transf_matrix[1][1] 0.010874 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 501 1 EDO EDO . C 3 HOH A 1 601 56 HOH HOH . C 3 HOH A 2 602 77 HOH HOH . C 3 HOH A 3 603 43 HOH HOH . C 3 HOH A 4 604 23 HOH HOH . C 3 HOH A 5 605 42 HOH HOH . C 3 HOH A 6 606 52 HOH HOH . C 3 HOH A 7 607 39 HOH HOH . C 3 HOH A 8 608 11 HOH HOH . C 3 HOH A 9 609 29 HOH HOH . C 3 HOH A 10 610 51 HOH HOH . C 3 HOH A 11 611 10 HOH HOH . C 3 HOH A 12 612 40 HOH HOH . C 3 HOH A 13 613 62 HOH HOH . C 3 HOH A 14 614 12 HOH HOH . C 3 HOH A 15 615 13 HOH HOH . C 3 HOH A 16 616 48 HOH HOH . C 3 HOH A 17 617 113 HOH HOH . C 3 HOH A 18 618 34 HOH HOH . C 3 HOH A 19 619 35 HOH HOH . C 3 HOH A 20 620 32 HOH HOH . C 3 HOH A 21 621 8 HOH HOH . C 3 HOH A 22 622 21 HOH HOH . C 3 HOH A 23 623 4 HOH HOH . C 3 HOH A 24 624 18 HOH HOH . C 3 HOH A 25 625 137 HOH HOH . C 3 HOH A 26 626 5 HOH HOH . C 3 HOH A 27 627 135 HOH HOH . C 3 HOH A 28 628 30 HOH HOH . C 3 HOH A 29 629 64 HOH HOH . C 3 HOH A 30 630 132 HOH HOH . C 3 HOH A 31 631 49 HOH HOH . C 3 HOH A 32 632 58 HOH HOH . C 3 HOH A 33 633 3 HOH HOH . C 3 HOH A 34 634 47 HOH HOH . C 3 HOH A 35 635 68 HOH HOH . C 3 HOH A 36 636 37 HOH HOH . C 3 HOH A 37 637 7 HOH HOH . C 3 HOH A 38 638 69 HOH HOH . C 3 HOH A 39 639 25 HOH HOH . C 3 HOH A 40 640 53 HOH HOH . C 3 HOH A 41 641 79 HOH HOH . C 3 HOH A 42 642 16 HOH HOH . C 3 HOH A 43 643 33 HOH HOH . C 3 HOH A 44 644 140 HOH HOH . C 3 HOH A 45 645 134 HOH HOH . C 3 HOH A 46 646 141 HOH HOH . C 3 HOH A 47 647 55 HOH HOH . C 3 HOH A 48 648 38 HOH HOH . C 3 HOH A 49 649 22 HOH HOH . C 3 HOH A 50 650 27 HOH HOH . C 3 HOH A 51 651 19 HOH HOH . C 3 HOH A 52 652 20 HOH HOH . C 3 HOH A 53 653 36 HOH HOH . C 3 HOH A 54 654 123 HOH HOH . C 3 HOH A 55 655 24 HOH HOH . C 3 HOH A 56 656 17 HOH HOH . C 3 HOH A 57 657 114 HOH HOH . C 3 HOH A 58 658 46 HOH HOH . C 3 HOH A 59 659 50 HOH HOH . C 3 HOH A 60 660 138 HOH HOH . C 3 HOH A 61 661 130 HOH HOH . C 3 HOH A 62 662 54 HOH HOH . C 3 HOH A 63 663 120 HOH HOH . C 3 HOH A 64 664 15 HOH HOH . C 3 HOH A 65 665 63 HOH HOH . C 3 HOH A 66 666 6 HOH HOH . C 3 HOH A 67 667 124 HOH HOH . C 3 HOH A 68 668 115 HOH HOH . C 3 HOH A 69 669 1 HOH HOH . C 3 HOH A 70 670 139 HOH HOH . C 3 HOH A 71 671 112 HOH HOH . C 3 HOH A 72 672 136 HOH HOH . C 3 HOH A 73 673 109 HOH HOH . C 3 HOH A 74 674 72 HOH HOH . C 3 HOH A 75 675 108 HOH HOH . C 3 HOH A 76 676 116 HOH HOH . C 3 HOH A 77 677 110 HOH HOH . C 3 HOH A 78 678 119 HOH HOH . C 3 HOH A 79 679 125 HOH HOH . C 3 HOH A 80 680 73 HOH HOH . C 3 HOH A 81 681 131 HOH HOH . C 3 HOH A 82 682 126 HOH HOH . C 3 HOH A 83 683 122 HOH HOH . C 3 HOH A 84 684 118 HOH HOH . C 3 HOH A 85 685 117 HOH HOH . C 3 HOH A 86 686 121 HOH HOH . C 3 HOH A 87 687 127 HOH HOH . C 3 HOH A 88 688 128 HOH HOH . C 3 HOH A 89 689 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 4.88 55.829 -3.833 1 46.15 ? C1 EDO 501 A 1 HETATM 2 O O1 EDO . . . B 2 6.027 56.157 -3.049 1 49.8 ? O1 EDO 501 A 1 HETATM 3 C C2 EDO . . . B 2 3.964 57.004 -3.599 1 47.14 ? C2 EDO 501 A 1 HETATM 4 O O2 EDO . . . B 2 3.912 57.193 -2.176 1 47.96 ? O2 EDO 501 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #