data_7AXO # _model_server_result.job_id WBtmx4K-mU15klaGwV9TgA _model_server_result.datetime_utc '2024-11-21 10:24:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7axo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 7AXO # _exptl.entry_id 7AXO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.932 _cell.angle_gamma 90 _cell.entry_id 7AXO _cell.length_a 113.562 _cell.length_b 53.182 _cell.length_c 44.896 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AXO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7AXO _atom_sites.fract_transf_matrix[1][1] 0.008806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002022 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018803 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 501 501 DMS DMS . C 2 DMS A 1 502 601 DMS DMS . D 2 DMS A 1 503 701 DMS DMS . E 2 DMS A 1 504 801 DMS DMS . F 2 DMS A 1 505 901 DMS DMS . G 3 QCP A 1 506 1001 QCP QCP . H 4 HOH A 1 601 247 HOH HOH . H 4 HOH A 2 602 44 HOH HOH . H 4 HOH A 3 603 128 HOH HOH . H 4 HOH A 4 604 265 HOH HOH . H 4 HOH A 5 605 221 HOH HOH . H 4 HOH A 6 606 31 HOH HOH . H 4 HOH A 7 607 143 HOH HOH . H 4 HOH A 8 608 39 HOH HOH . H 4 HOH A 9 609 209 HOH HOH . H 4 HOH A 10 610 99 HOH HOH . H 4 HOH A 11 611 91 HOH HOH . H 4 HOH A 12 612 187 HOH HOH . H 4 HOH A 13 613 210 HOH HOH . H 4 HOH A 14 614 249 HOH HOH . H 4 HOH A 15 615 250 HOH HOH . H 4 HOH A 16 616 261 HOH HOH . H 4 HOH A 17 617 262 HOH HOH . H 4 HOH A 18 618 200 HOH HOH . H 4 HOH A 19 619 216 HOH HOH . H 4 HOH A 20 620 92 HOH HOH . H 4 HOH A 21 621 144 HOH HOH . H 4 HOH A 22 622 6 HOH HOH . H 4 HOH A 23 623 148 HOH HOH . H 4 HOH A 24 624 41 HOH HOH . H 4 HOH A 25 625 172 HOH HOH . H 4 HOH A 26 626 117 HOH HOH . H 4 HOH A 27 627 139 HOH HOH . H 4 HOH A 28 628 168 HOH HOH . H 4 HOH A 29 629 248 HOH HOH . H 4 HOH A 30 630 62 HOH HOH . H 4 HOH A 31 631 152 HOH HOH . H 4 HOH A 32 632 166 HOH HOH . H 4 HOH A 33 633 1 HOH HOH . H 4 HOH A 34 634 206 HOH HOH . H 4 HOH A 35 635 51 HOH HOH . H 4 HOH A 36 636 116 HOH HOH . H 4 HOH A 37 637 115 HOH HOH . H 4 HOH A 38 638 182 HOH HOH . H 4 HOH A 39 639 49 HOH HOH . H 4 HOH A 40 640 40 HOH HOH . H 4 HOH A 41 641 180 HOH HOH . H 4 HOH A 42 642 50 HOH HOH . H 4 HOH A 43 643 119 HOH HOH . H 4 HOH A 44 644 147 HOH HOH . H 4 HOH A 45 645 199 HOH HOH . H 4 HOH A 46 646 36 HOH HOH . H 4 HOH A 47 647 15 HOH HOH . H 4 HOH A 48 648 33 HOH HOH . H 4 HOH A 49 649 74 HOH HOH . H 4 HOH A 50 650 191 HOH HOH . H 4 HOH A 51 651 45 HOH HOH . H 4 HOH A 52 652 159 HOH HOH . H 4 HOH A 53 653 141 HOH HOH . H 4 HOH A 54 654 102 HOH HOH . H 4 HOH A 55 655 212 HOH HOH . H 4 HOH A 56 656 100 HOH HOH . H 4 HOH A 57 657 174 HOH HOH . H 4 HOH A 58 658 203 HOH HOH . H 4 HOH A 59 659 29 HOH HOH . H 4 HOH A 60 660 158 HOH HOH . H 4 HOH A 61 661 5 HOH HOH . H 4 HOH A 62 662 170 HOH HOH . H 4 HOH A 63 663 232 HOH HOH . H 4 HOH A 64 664 220 HOH HOH . H 4 HOH A 65 665 156 HOH HOH . H 4 HOH A 66 666 196 HOH HOH . H 4 HOH A 67 667 4 HOH HOH . H 4 HOH A 68 668 151 HOH HOH . H 4 HOH A 69 669 137 HOH HOH . H 4 HOH A 70 670 27 HOH HOH . H 4 HOH A 71 671 16 HOH HOH . H 4 HOH A 72 672 107 HOH HOH . H 4 HOH A 73 673 93 HOH HOH . H 4 HOH A 74 674 213 HOH HOH . H 4 HOH A 75 675 54 HOH HOH . H 4 HOH A 76 676 96 HOH HOH . H 4 HOH A 77 677 241 HOH HOH . H 4 HOH A 78 678 123 HOH HOH . H 4 HOH A 79 679 73 HOH HOH . H 4 HOH A 80 680 26 HOH HOH . H 4 HOH A 81 681 71 HOH HOH . H 4 HOH A 82 682 82 HOH HOH . H 4 HOH A 83 683 218 HOH HOH . H 4 HOH A 84 684 30 HOH HOH . H 4 HOH A 85 685 13 HOH HOH . H 4 HOH A 86 686 65 HOH HOH . H 4 HOH A 87 687 56 HOH HOH . H 4 HOH A 88 688 53 HOH HOH . H 4 HOH A 89 689 52 HOH HOH . H 4 HOH A 90 690 178 HOH HOH . H 4 HOH A 91 691 47 HOH HOH . H 4 HOH A 92 692 64 HOH HOH . H 4 HOH A 93 693 32 HOH HOH . H 4 HOH A 94 694 77 HOH HOH . H 4 HOH A 95 695 22 HOH HOH . H 4 HOH A 96 696 75 HOH HOH . H 4 HOH A 97 697 207 HOH HOH . H 4 HOH A 98 698 132 HOH HOH . H 4 HOH A 99 699 68 HOH HOH . H 4 HOH A 100 700 118 HOH HOH . H 4 HOH A 101 701 67 HOH HOH . H 4 HOH A 102 702 194 HOH HOH . H 4 HOH A 103 703 127 HOH HOH . H 4 HOH A 104 704 122 HOH HOH . H 4 HOH A 105 705 72 HOH HOH . H 4 HOH A 106 706 24 HOH HOH . H 4 HOH A 107 707 145 HOH HOH . H 4 HOH A 108 708 25 HOH HOH . H 4 HOH A 109 709 173 HOH HOH . H 4 HOH A 110 710 48 HOH HOH . H 4 HOH A 111 711 78 HOH HOH . H 4 HOH A 112 712 12 HOH HOH . H 4 HOH A 113 713 149 HOH HOH . H 4 HOH A 114 714 43 HOH HOH . H 4 HOH A 115 715 185 HOH HOH . H 4 HOH A 116 716 9 HOH HOH . H 4 HOH A 117 717 28 HOH HOH . H 4 HOH A 118 718 23 HOH HOH . H 4 HOH A 119 719 120 HOH HOH . H 4 HOH A 120 720 146 HOH HOH . H 4 HOH A 121 721 35 HOH HOH . H 4 HOH A 122 722 133 HOH HOH . H 4 HOH A 123 723 267 HOH HOH . H 4 HOH A 124 724 264 HOH HOH . H 4 HOH A 125 725 10 HOH HOH . H 4 HOH A 126 726 11 HOH HOH . H 4 HOH A 127 727 57 HOH HOH . H 4 HOH A 128 728 165 HOH HOH . H 4 HOH A 129 729 2 HOH HOH . H 4 HOH A 130 730 19 HOH HOH . H 4 HOH A 131 731 109 HOH HOH . H 4 HOH A 132 732 83 HOH HOH . H 4 HOH A 133 733 246 HOH HOH . H 4 HOH A 134 734 240 HOH HOH . H 4 HOH A 135 735 63 HOH HOH . H 4 HOH A 136 736 142 HOH HOH . H 4 HOH A 137 737 69 HOH HOH . H 4 HOH A 138 738 80 HOH HOH . H 4 HOH A 139 739 167 HOH HOH . H 4 HOH A 140 740 58 HOH HOH . H 4 HOH A 141 741 202 HOH HOH . H 4 HOH A 142 742 131 HOH HOH . H 4 HOH A 143 743 154 HOH HOH . H 4 HOH A 144 744 81 HOH HOH . H 4 HOH A 145 745 104 HOH HOH . H 4 HOH A 146 746 121 HOH HOH . H 4 HOH A 147 747 3 HOH HOH . H 4 HOH A 148 748 219 HOH HOH . H 4 HOH A 149 749 223 HOH HOH . H 4 HOH A 150 750 20 HOH HOH . H 4 HOH A 151 751 7 HOH HOH . H 4 HOH A 152 752 17 HOH HOH . H 4 HOH A 153 753 98 HOH HOH . H 4 HOH A 154 754 215 HOH HOH . H 4 HOH A 155 755 21 HOH HOH . H 4 HOH A 156 756 8 HOH HOH . H 4 HOH A 157 757 60 HOH HOH . H 4 HOH A 158 758 201 HOH HOH . H 4 HOH A 159 759 204 HOH HOH . H 4 HOH A 160 760 135 HOH HOH . H 4 HOH A 161 761 181 HOH HOH . H 4 HOH A 162 762 263 HOH HOH . H 4 HOH A 163 763 130 HOH HOH . H 4 HOH A 164 764 251 HOH HOH . H 4 HOH A 165 765 76 HOH HOH . H 4 HOH A 166 766 125 HOH HOH . H 4 HOH A 167 767 126 HOH HOH . H 4 HOH A 168 768 237 HOH HOH . H 4 HOH A 169 769 61 HOH HOH . H 4 HOH A 170 770 234 HOH HOH . H 4 HOH A 171 771 46 HOH HOH . H 4 HOH A 172 772 231 HOH HOH . H 4 HOH A 173 773 103 HOH HOH . H 4 HOH A 174 774 224 HOH HOH . H 4 HOH A 175 775 66 HOH HOH . H 4 HOH A 176 776 14 HOH HOH . H 4 HOH A 177 777 205 HOH HOH . H 4 HOH A 178 778 106 HOH HOH . H 4 HOH A 179 779 34 HOH HOH . H 4 HOH A 180 780 18 HOH HOH . H 4 HOH A 181 781 114 HOH HOH . H 4 HOH A 182 782 89 HOH HOH . H 4 HOH A 183 783 259 HOH HOH . H 4 HOH A 184 784 136 HOH HOH . H 4 HOH A 185 785 175 HOH HOH . H 4 HOH A 186 786 140 HOH HOH . H 4 HOH A 187 787 153 HOH HOH . H 4 HOH A 188 788 37 HOH HOH . H 4 HOH A 189 789 42 HOH HOH . H 4 HOH A 190 790 211 HOH HOH . H 4 HOH A 191 791 169 HOH HOH . H 4 HOH A 192 792 243 HOH HOH . H 4 HOH A 193 793 227 HOH HOH . H 4 HOH A 194 794 105 HOH HOH . H 4 HOH A 195 795 97 HOH HOH . H 4 HOH A 196 796 101 HOH HOH . H 4 HOH A 197 797 238 HOH HOH . H 4 HOH A 198 798 188 HOH HOH . H 4 HOH A 199 799 90 HOH HOH . H 4 HOH A 200 800 86 HOH HOH . H 4 HOH A 201 801 236 HOH HOH . H 4 HOH A 202 802 88 HOH HOH . H 4 HOH A 203 803 157 HOH HOH . H 4 HOH A 204 804 225 HOH HOH . H 4 HOH A 205 805 239 HOH HOH . H 4 HOH A 206 806 256 HOH HOH . H 4 HOH A 207 807 258 HOH HOH . H 4 HOH A 208 808 38 HOH HOH . H 4 HOH A 209 809 244 HOH HOH . H 4 HOH A 210 810 235 HOH HOH . H 4 HOH A 211 811 197 HOH HOH . H 4 HOH A 212 812 208 HOH HOH . H 4 HOH A 213 813 226 HOH HOH . H 4 HOH A 214 814 164 HOH HOH . H 4 HOH A 215 815 253 HOH HOH . H 4 HOH A 216 816 217 HOH HOH . H 4 HOH A 217 817 87 HOH HOH . H 4 HOH A 218 818 252 HOH HOH . H 4 HOH A 219 819 186 HOH HOH . H 4 HOH A 220 820 245 HOH HOH . H 4 HOH A 221 821 222 HOH HOH . H 4 HOH A 222 822 230 HOH HOH . H 4 HOH A 223 823 242 HOH HOH . H 4 HOH A 224 824 124 HOH HOH . H 4 HOH A 225 825 134 HOH HOH . H 4 HOH A 226 826 155 HOH HOH . H 4 HOH A 227 827 266 HOH HOH . H 4 HOH A 228 828 110 HOH HOH . H 4 HOH A 229 829 192 HOH HOH . H 4 HOH A 230 830 189 HOH HOH . H 4 HOH A 231 831 161 HOH HOH . H 4 HOH A 232 832 112 HOH HOH . H 4 HOH A 233 833 160 HOH HOH . H 4 HOH A 234 834 129 HOH HOH . H 4 HOH A 235 835 70 HOH HOH . H 4 HOH A 236 836 190 HOH HOH . H 4 HOH A 237 837 150 HOH HOH . H 4 HOH A 238 838 214 HOH HOH . H 4 HOH A 239 839 162 HOH HOH . H 4 HOH A 240 840 95 HOH HOH . H 4 HOH A 241 841 228 HOH HOH . H 4 HOH A 242 842 229 HOH HOH . H 4 HOH A 243 843 55 HOH HOH . H 4 HOH A 244 844 233 HOH HOH . H 4 HOH A 245 845 59 HOH HOH . H 4 HOH A 246 846 85 HOH HOH . H 4 HOH A 247 847 177 HOH HOH . H 4 HOH A 248 848 163 HOH HOH . H 4 HOH A 249 849 198 HOH HOH . H 4 HOH A 250 850 176 HOH HOH . H 4 HOH A 251 851 193 HOH HOH . H 4 HOH A 252 852 184 HOH HOH . H 4 HOH A 253 853 183 HOH HOH . H 4 HOH A 254 854 108 HOH HOH . H 4 HOH A 255 855 94 HOH HOH . H 4 HOH A 256 856 84 HOH HOH . H 4 HOH A 257 857 195 HOH HOH . H 4 HOH A 258 858 257 HOH HOH . H 4 HOH A 259 859 111 HOH HOH . H 4 HOH A 260 860 179 HOH HOH . H 4 HOH A 261 861 79 HOH HOH . H 4 HOH A 262 862 113 HOH HOH . H 4 HOH A 263 863 171 HOH HOH . H 4 HOH A 264 864 138 HOH HOH . H 4 HOH A 265 865 255 HOH HOH . H 4 HOH A 266 866 254 HOH HOH . H 4 HOH A 267 867 260 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . F 2 20.68 -15.983 4.936 1 67.28 ? S DMS 505 A 1 HETATM 2 O O DMS . . . F 2 22.005 -15.322 5.147 1 63.58 ? O DMS 505 A 1 HETATM 3 C C1 DMS . . . F 2 20.868 -17.417 3.84 1 66.14 ? C1 DMS 505 A 1 HETATM 4 C C2 DMS . . . F 2 20.175 -16.819 6.466 1 52.97 ? C2 DMS 505 A 1 HETATM 5 H H11 DMS . . . F 2 21.209 -17.095 2.891 1 79.42 ? H11 DMS 505 A 1 HETATM 6 H H12 DMS . . . F 2 19.934 -17.904 3.733 1 79.42 ? H12 DMS 505 A 1 HETATM 7 H H13 DMS . . . F 2 21.571 -18.091 4.257 1 79.42 ? H13 DMS 505 A 1 HETATM 8 H H21 DMS . . . F 2 20.016 -16.099 7.226 1 63.62 ? H21 DMS 505 A 1 HETATM 9 H H22 DMS . . . F 2 20.936 -17.49 6.77 1 63.62 ? H22 DMS 505 A 1 HETATM 10 H H23 DMS . . . F 2 19.279 -17.356 6.296 1 63.62 ? H23 DMS 505 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #