data_7AYQ # _model_server_result.job_id vAjKS0jQZWF_QkPGoOxxaw _model_server_result.datetime_utc '2024-11-13 19:51:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ayq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":904}' # _entry.id 7AYQ # _exptl.entry_id 7AYQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 500.428 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[3-[4-[(4-bromophenyl)methyl]piperazin-1-yl]carbonylphenyl]-2-ethyl-2-methanoyl-butanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7AYQ _cell.length_a 149.505 _cell.length_b 149.505 _cell.length_c 269.331 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AYQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 755 A SER 755 1_555 F C24 S9Z . A S9Z 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale2 B OG SER 755 B SER 755 1_555 J C24 S9Z . B S9Z 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? # _chem_comp.formula 'C25 H30 Br N3 O3' _chem_comp.formula_weight 500.428 _chem_comp.id S9Z _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[3-[4-[(4-bromophenyl)methyl]piperazin-1-yl]carbonylphenyl]-2-ethyl-2-methanoyl-butanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 C24 S9Z doub 294 n n C24 C23 S9Z sing 295 n n C29 C23 S9Z sing 296 n n C29 C30 S9Z sing 297 n n O26 C22 S9Z doub 298 n n C23 C22 S9Z sing 299 n n C23 C27 S9Z sing 300 n n C28 C27 S9Z sing 301 n n C22 N21 S9Z sing 302 n n N21 C19 S9Z sing 303 n n O3 C14 S9Z doub 304 n n C20 C19 S9Z doub 305 n y C20 C15 S9Z sing 306 n y C9 C10 S9Z sing 307 n n C9 N8 S9Z sing 308 n n C19 C18 S9Z sing 309 n y C10 N11 S9Z sing 310 n n C1 N8 S9Z sing 311 n n C1 C2 S9Z sing 312 n n C14 N11 S9Z sing 313 n n C14 C15 S9Z sing 314 n n N11 C12 S9Z sing 315 n n C13 N8 S9Z sing 316 n n C13 C12 S9Z sing 317 n n C15 C16 S9Z doub 318 n y C3 C2 S9Z doub 319 n y C3 C4 S9Z sing 320 n y C2 C7 S9Z sing 321 n y C18 C17 S9Z doub 322 n y C4 C5 S9Z doub 323 n y C16 C17 S9Z sing 324 n y C7 C6 S9Z doub 325 n y C5 C6 S9Z sing 326 n y C5 BR1 S9Z sing 327 n n C1 H1 S9Z sing 328 n n C1 H2 S9Z sing 329 n n C3 H3 S9Z sing 330 n n C4 H4 S9Z sing 331 n n C6 H5 S9Z sing 332 n n C7 H6 S9Z sing 333 n n C9 H7 S9Z sing 334 n n C9 H8 S9Z sing 335 n n C10 H9 S9Z sing 336 n n C10 H10 S9Z sing 337 n n C12 H11 S9Z sing 338 n n C12 H12 S9Z sing 339 n n C17 H13 S9Z sing 340 n n C16 H14 S9Z sing 341 n n C13 H15 S9Z sing 342 n n C13 H16 S9Z sing 343 n n C18 H17 S9Z sing 344 n n C20 H18 S9Z sing 345 n n N21 H20 S9Z sing 346 n n C24 H21 S9Z sing 347 n n C27 H22 S9Z sing 348 n n C27 H23 S9Z sing 349 n n C28 H24 S9Z sing 350 n n C28 H25 S9Z sing 351 n n C28 H26 S9Z sing 352 n n C29 H27 S9Z sing 353 n n C29 H28 S9Z sing 354 n n C30 H29 S9Z sing 355 n n C30 H30 S9Z sing 356 n n C30 H31 S9Z sing 357 n n # _atom_sites.entry_id 7AYQ _atom_sites.fract_transf_matrix[1][1] 0.006689 _atom_sites.fract_transf_matrix[1][2] 0.003862 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003713 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TMO A 1 901 901 TMO TMO . D 3 PO4 A 1 902 1001 PO4 PO4 . E 4 GOL A 1 903 2 GOL GOL . F 5 S9Z A 1 904 2 S9Z 114 . G 2 TMO B 1 901 901 TMO TMO . H 3 PO4 B 1 902 1001 PO4 PO4 . I 4 GOL B 1 903 1 GOL GOL . J 5 S9Z B 1 904 1 S9Z 114 . K 6 HOH A 1 1001 11 HOH HOH . K 6 HOH A 2 1002 89 HOH HOH . K 6 HOH A 3 1003 85 HOH HOH . K 6 HOH A 4 1004 105 HOH HOH . K 6 HOH A 5 1005 4 HOH HOH . K 6 HOH A 6 1006 88 HOH HOH . K 6 HOH A 7 1007 15 HOH HOH . K 6 HOH A 8 1008 169 HOH HOH . K 6 HOH A 9 1009 81 HOH HOH . K 6 HOH A 10 1010 9 HOH HOH . K 6 HOH A 11 1011 79 HOH HOH . K 6 HOH A 12 1012 96 HOH HOH . K 6 HOH A 13 1013 156 HOH HOH . K 6 HOH A 14 1014 26 HOH HOH . K 6 HOH A 15 1015 134 HOH HOH . K 6 HOH A 16 1016 112 HOH HOH . K 6 HOH A 17 1017 123 HOH HOH . K 6 HOH A 18 1018 1 HOH HOH . K 6 HOH A 19 1019 53 HOH HOH . K 6 HOH A 20 1020 87 HOH HOH . K 6 HOH A 21 1021 95 HOH HOH . K 6 HOH A 22 1022 90 HOH HOH . K 6 HOH A 23 1023 67 HOH HOH . K 6 HOH A 24 1024 17 HOH HOH . K 6 HOH A 25 1025 161 HOH HOH . K 6 HOH A 26 1026 115 HOH HOH . K 6 HOH A 27 1027 107 HOH HOH . K 6 HOH A 28 1028 3 HOH HOH . K 6 HOH A 29 1029 83 HOH HOH . K 6 HOH A 30 1030 30 HOH HOH . K 6 HOH A 31 1031 148 HOH HOH . K 6 HOH A 32 1032 162 HOH HOH . K 6 HOH A 33 1033 64 HOH HOH . K 6 HOH A 34 1034 119 HOH HOH . K 6 HOH A 35 1035 126 HOH HOH . K 6 HOH A 36 1036 157 HOH HOH . K 6 HOH A 37 1037 39 HOH HOH . K 6 HOH A 38 1038 50 HOH HOH . K 6 HOH A 39 1039 54 HOH HOH . K 6 HOH A 40 1040 86 HOH HOH . K 6 HOH A 41 1041 135 HOH HOH . K 6 HOH A 42 1042 48 HOH HOH . K 6 HOH A 43 1043 6 HOH HOH . K 6 HOH A 44 1044 106 HOH HOH . K 6 HOH A 45 1045 2 HOH HOH . K 6 HOH A 46 1046 160 HOH HOH . K 6 HOH A 47 1047 46 HOH HOH . K 6 HOH A 48 1048 82 HOH HOH . K 6 HOH A 49 1049 102 HOH HOH . K 6 HOH A 50 1050 45 HOH HOH . K 6 HOH A 51 1051 146 HOH HOH . K 6 HOH A 52 1052 25 HOH HOH . K 6 HOH A 53 1053 91 HOH HOH . K 6 HOH A 54 1054 34 HOH HOH . K 6 HOH A 55 1055 59 HOH HOH . K 6 HOH A 56 1056 43 HOH HOH . K 6 HOH A 57 1057 47 HOH HOH . K 6 HOH A 58 1058 55 HOH HOH . K 6 HOH A 59 1059 141 HOH HOH . K 6 HOH A 60 1060 72 HOH HOH . K 6 HOH A 61 1061 130 HOH HOH . K 6 HOH A 62 1062 49 HOH HOH . K 6 HOH A 63 1063 33 HOH HOH . K 6 HOH A 64 1064 84 HOH HOH . K 6 HOH A 65 1065 144 HOH HOH . K 6 HOH A 66 1066 51 HOH HOH . K 6 HOH A 67 1067 70 HOH HOH . K 6 HOH A 68 1068 137 HOH HOH . K 6 HOH A 69 1069 13 HOH HOH . K 6 HOH A 70 1070 12 HOH HOH . K 6 HOH A 71 1071 94 HOH HOH . K 6 HOH A 72 1072 38 HOH HOH . K 6 HOH A 73 1073 58 HOH HOH . K 6 HOH A 74 1074 5 HOH HOH . K 6 HOH A 75 1075 147 HOH HOH . K 6 HOH A 76 1076 164 HOH HOH . K 6 HOH A 77 1077 155 HOH HOH . K 6 HOH A 78 1078 22 HOH HOH . K 6 HOH A 79 1079 116 HOH HOH . K 6 HOH A 80 1080 103 HOH HOH . K 6 HOH A 81 1081 23 HOH HOH . K 6 HOH A 82 1082 168 HOH HOH . K 6 HOH A 83 1083 139 HOH HOH . K 6 HOH A 84 1084 131 HOH HOH . K 6 HOH A 85 1085 133 HOH HOH . K 6 HOH A 86 1086 145 HOH HOH . K 6 HOH A 87 1087 19 HOH HOH . K 6 HOH A 88 1088 56 HOH HOH . K 6 HOH A 89 1089 143 HOH HOH . K 6 HOH A 90 1090 71 HOH HOH . K 6 HOH A 91 1091 52 HOH HOH . K 6 HOH A 92 1092 60 HOH HOH . K 6 HOH A 93 1093 20 HOH HOH . K 6 HOH A 94 1094 142 HOH HOH . K 6 HOH A 95 1095 98 HOH HOH . K 6 HOH A 96 1096 31 HOH HOH . K 6 HOH A 97 1097 163 HOH HOH . K 6 HOH A 98 1098 153 HOH HOH . K 6 HOH A 99 1099 132 HOH HOH . K 6 HOH A 100 1100 66 HOH HOH . K 6 HOH A 101 1101 61 HOH HOH . K 6 HOH A 102 1102 138 HOH HOH . K 6 HOH A 103 1103 18 HOH HOH . K 6 HOH A 104 1104 117 HOH HOH . K 6 HOH A 105 1105 104 HOH HOH . K 6 HOH A 106 1106 32 HOH HOH . K 6 HOH A 107 1107 97 HOH HOH . K 6 HOH A 108 1108 7 HOH HOH . L 6 HOH B 1 1001 28 HOH HOH . L 6 HOH B 2 1002 165 HOH HOH . L 6 HOH B 3 1003 63 HOH HOH . L 6 HOH B 4 1004 167 HOH HOH . L 6 HOH B 5 1005 127 HOH HOH . L 6 HOH B 6 1006 21 HOH HOH . L 6 HOH B 7 1007 124 HOH HOH . L 6 HOH B 8 1008 110 HOH HOH . L 6 HOH B 9 1009 158 HOH HOH . L 6 HOH B 10 1010 35 HOH HOH . L 6 HOH B 11 1011 120 HOH HOH . L 6 HOH B 12 1012 36 HOH HOH . L 6 HOH B 13 1013 111 HOH HOH . L 6 HOH B 14 1014 114 HOH HOH . L 6 HOH B 15 1015 27 HOH HOH . L 6 HOH B 16 1016 166 HOH HOH . L 6 HOH B 17 1017 29 HOH HOH . L 6 HOH B 18 1018 74 HOH HOH . L 6 HOH B 19 1019 113 HOH HOH . L 6 HOH B 20 1020 78 HOH HOH . L 6 HOH B 21 1021 65 HOH HOH . L 6 HOH B 22 1022 171 HOH HOH . L 6 HOH B 23 1023 93 HOH HOH . L 6 HOH B 24 1024 41 HOH HOH . L 6 HOH B 25 1025 42 HOH HOH . L 6 HOH B 26 1026 80 HOH HOH . L 6 HOH B 27 1027 40 HOH HOH . L 6 HOH B 28 1028 125 HOH HOH . L 6 HOH B 29 1029 121 HOH HOH . L 6 HOH B 30 1030 151 HOH HOH . L 6 HOH B 31 1031 77 HOH HOH . L 6 HOH B 32 1032 101 HOH HOH . L 6 HOH B 33 1033 75 HOH HOH . L 6 HOH B 34 1034 37 HOH HOH . L 6 HOH B 35 1035 136 HOH HOH . L 6 HOH B 36 1036 109 HOH HOH . L 6 HOH B 37 1037 149 HOH HOH . L 6 HOH B 38 1038 73 HOH HOH . L 6 HOH B 39 1039 100 HOH HOH . L 6 HOH B 40 1040 152 HOH HOH . L 6 HOH B 41 1041 24 HOH HOH . L 6 HOH B 42 1042 8 HOH HOH . L 6 HOH B 43 1043 122 HOH HOH . L 6 HOH B 44 1044 159 HOH HOH . L 6 HOH B 45 1045 10 HOH HOH . L 6 HOH B 46 1046 99 HOH HOH . L 6 HOH B 47 1047 76 HOH HOH . L 6 HOH B 48 1048 44 HOH HOH . L 6 HOH B 49 1049 16 HOH HOH . L 6 HOH B 50 1050 150 HOH HOH . L 6 HOH B 51 1051 69 HOH HOH . L 6 HOH B 52 1052 68 HOH HOH . L 6 HOH B 53 1053 170 HOH HOH . L 6 HOH B 54 1054 154 HOH HOH . L 6 HOH B 55 1055 108 HOH HOH . L 6 HOH B 56 1056 118 HOH HOH . L 6 HOH B 57 1057 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 S9Z . . . F 5 80.328 75.335 -2.107 1 84.36 ? O3 S9Z 904 A 1 HETATM 2 C C1 S9Z . . . F 5 83.833 70.511 -2.377 1 67.63 ? C1 S9Z 904 A 1 HETATM 3 C C2 S9Z . . . F 5 84.882 70.013 -3.32 1 68.71 ? C2 S9Z 904 A 1 HETATM 4 C C3 S9Z . . . F 5 86.021 69.37 -2.831 1 68.12 ? C3 S9Z 904 A 1 HETATM 5 C C4 S9Z . . . F 5 86.981 68.92 -3.717 1 70.28 ? C4 S9Z 904 A 1 HETATM 6 C C5 S9Z . . . F 5 86.791 69.138 -5.088 1 79.36 ? C5 S9Z 904 A 1 HETATM 7 C C6 S9Z . . . F 5 85.653 69.808 -5.552 1 71.87 ? C6 S9Z 904 A 1 HETATM 8 C C7 S9Z . . . F 5 84.685 70.243 -4.667 1 72.67 ? C7 S9Z 904 A 1 HETATM 9 C C9 S9Z . . . F 5 81.979 71.965 -2.131 1 70.39 ? C9 S9Z 904 A 1 HETATM 10 C C10 S9Z . . . F 5 81.16 72.895 -2.997 1 72.49 ? C10 S9Z 904 A 1 HETATM 11 C C12 S9Z . . . F 5 83.306 74.088 -3.47 1 70.06 ? C12 S9Z 904 A 1 HETATM 12 C C17 S9Z . . . F 5 83.012 77.825 -5.049 1 72.78 ? C17 S9Z 904 A 1 HETATM 13 C C16 S9Z . . . F 5 82.459 76.63 -4.615 1 69.91 ? C16 S9Z 904 A 1 HETATM 14 C C15 S9Z . . . F 5 81.85 76.599 -3.368 1 71.64 ? C15 S9Z 904 A 1 HETATM 15 C C14 S9Z . . . F 5 81.288 75.312 -2.847 1 72.75 ? C14 S9Z 904 A 1 HETATM 16 C C13 S9Z . . . F 5 83.973 72.831 -2.93 1 72.14 ? C13 S9Z 904 A 1 HETATM 17 C C18 S9Z . . . F 5 82.987 78.978 -4.26 1 70.34 ? C18 S9Z 904 A 1 HETATM 18 C C19 S9Z . . . F 5 82.393 78.979 -2.99 1 66.63 ? C19 S9Z 904 A 1 HETATM 19 C C20 S9Z . . . F 5 81.831 77.759 -2.554 1 65.27 ? C20 S9Z 904 A 1 HETATM 20 C C22 S9Z . . . F 5 81.992 80.398 -1.045 1 57.31 ? C22 S9Z 904 A 1 HETATM 21 N N8 S9Z . . . F 5 83.119 71.623 -2.988 1 64.66 ? N8 S9Z 904 A 1 HETATM 22 N N11 S9Z . . . F 5 81.895 74.157 -3.099 1 71.51 ? N11 S9Z 904 A 1 HETATM 23 N N21 S9Z . . . F 5 82.455 80.175 -2.282 1 62.73 ? N21 S9Z 904 A 1 HETATM 24 C C23 S9Z . . . F 5 81.763 81.804 -0.508 1 60.82 ? C23 S9Z 904 A 1 HETATM 25 C C24 S9Z . . . F 5 81.999 81.794 0.99 1 57.06 ? C24 S9Z 904 A 1 HETATM 26 O O25 S9Z . . . F 5 81.119 81.985 1.816 1 53.83 ? O25 S9Z 904 A 1 HETATM 27 O O26 S9Z . . . F 5 81.619 79.481 -0.355 1 64.12 ? O26 S9Z 904 A 1 HETATM 28 C C27 S9Z . . . F 5 80.277 82.154 -0.693 1 62.61 ? C27 S9Z 904 A 1 HETATM 29 C C28 S9Z . . . F 5 79.819 82.273 -2.14 1 77.57 ? C28 S9Z 904 A 1 HETATM 30 C C29 S9Z . . . F 5 82.731 82.809 -1.158 1 53.33 ? C29 S9Z 904 A 1 HETATM 31 C C30 S9Z . . . F 5 82.553 84.221 -0.657 1 55.45 ? C30 S9Z 904 A 1 HETATM 32 BR BR1 S9Z . . . F 5 88.042 68.513 -6.399 1 109.86 ? BR1 S9Z 904 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #