data_7B0O
#
_model_server_result.job_id            D-sQ3OS2JXzrdn9qTxOKfA 
_model_server_result.datetime_utc      '2024-11-26 13:56:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7b0o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":307}' 
#
_entry.id    7B0O 
#
_exptl.entry_id    7B0O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.38 
_cell.angle_gamma         90 
_cell.entry_id            7B0O 
_cell.length_a            67.724 
_cell.length_b            44.7 
_cell.length_c            116.865 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7B0O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
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loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,AA 1 1 
B,O,P,Q,R,S,T,U,V,W,X,Y,Z,BA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 S N N 
? 4 T N N 
? 4 X N N 
? 4 Y N N 
? 4 Z N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7B0O 
_atom_sites.fract_transf_matrix[1][1]    0.014766 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000613 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022371 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008564 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OLC A 1 301 282 OLC OLC . 
D 2 OLC A 1 302 382 OLC OLC . 
E 2 OLC A 1 303 482 OLC OLC . 
F 2 OLC A 1 304 582 OLC OLC . 
G 3 PE5 A 1 305 682 PE5 PE5 . 
H 2 OLC A 1 306 701 OLC OLC . 
I 4 GOL A 1 307 801 GOL GOL . 
J 4 GOL A 1 308 901 GOL GOL . 
K 4 GOL A 1 309 1001 GOL GOL . 
L 4 GOL A 1 310 1101 GOL GOL . 
M 4 GOL A 1 311 1201 GOL GOL . 
N 2 OLC A 1 312 1301 OLC OLC . 
O 2 OLC B 1 301 282 OLC OLC . 
P 2 OLC B 1 302 382 OLC OLC . 
Q 2 OLC B 1 303 501 OLC OLC . 
R 2 OLC B 1 304 701 OLC OLC . 
S 4 GOL B 1 305 1001 GOL GOL . 
T 4 GOL B 1 306 1101 GOL GOL . 
U 2 OLC B 1 307 1501 OLC OLC . 
V 5 PG5 B 1 308 1601 PG5 PG5 . 
W 5 PG5 B 1 309 1701 PG5 PG5 . 
X 4 GOL B 1 310 1801 GOL GOL . 
Y 4 GOL B 1 311 1901 GOL GOL . 
Z 4 GOL B 1 312 2001 GOL GOL . 
AA 6 HOH A 1 401 46 HOH HOH . 
AA 6 HOH A 2 402 17 HOH HOH . 
AA 6 HOH A 3 403 29 HOH HOH . 
AA 6 HOH A 4 404 14 HOH HOH . 
AA 6 HOH A 5 405 21 HOH HOH . 
AA 6 HOH A 6 406 15 HOH HOH . 
AA 6 HOH A 7 407 19 HOH HOH . 
AA 6 HOH A 8 408 31 HOH HOH . 
AA 6 HOH A 9 409 7 HOH HOH . 
AA 6 HOH A 10 410 2 HOH HOH . 
AA 6 HOH A 11 411 24 HOH HOH . 
AA 6 HOH A 12 412 3 HOH HOH . 
AA 6 HOH A 13 413 36 HOH HOH . 
AA 6 HOH A 14 414 45 HOH HOH . 
AA 6 HOH A 15 415 18 HOH HOH . 
AA 6 HOH A 16 416 47 HOH HOH . 
AA 6 HOH A 17 417 52 HOH HOH . 
AA 6 HOH A 18 418 32 HOH HOH . 
AA 6 HOH A 19 419 16 HOH HOH . 
AA 6 HOH A 20 420 27 HOH HOH . 
AA 6 HOH A 21 421 4 HOH HOH . 
AA 6 HOH A 22 422 28 HOH HOH . 
AA 6 HOH A 23 423 44 HOH HOH . 
BA 6 HOH B 1 401 10 HOH HOH . 
BA 6 HOH B 2 402 41 HOH HOH . 
BA 6 HOH B 3 403 49 HOH HOH . 
BA 6 HOH B 4 404 13 HOH HOH . 
BA 6 HOH B 5 405 34 HOH HOH . 
BA 6 HOH B 6 406 9 HOH HOH . 
BA 6 HOH B 7 407 8 HOH HOH . 
BA 6 HOH B 8 408 35 HOH HOH . 
BA 6 HOH B 9 409 5 HOH HOH . 
BA 6 HOH B 10 410 6 HOH HOH . 
BA 6 HOH B 11 411 1 HOH HOH . 
BA 6 HOH B 12 412 12 HOH HOH . 
BA 6 HOH B 13 413 11 HOH HOH . 
BA 6 HOH B 14 414 37 HOH HOH . 
BA 6 HOH B 15 415 51 HOH HOH . 
BA 6 HOH B 16 416 42 HOH HOH . 
BA 6 HOH B 17 417 48 HOH HOH . 
BA 6 HOH B 18 418 33 HOH HOH . 
BA 6 HOH B 19 419 40 HOH HOH . 
BA 6 HOH B 20 420 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 4 4.91 21.76 53.13 1 71.58 ? C1 GOL 307 A 1 
HETATM 2 O O1 GOL . . . I 4 6.087 21.679 52.389 1 79.04 ? O1 GOL 307 A 1 
HETATM 3 C C2 GOL . . . I 4 4.341 23.181 52.911 1 60.17 ? C2 GOL 307 A 1 
HETATM 4 O O2 GOL . . . I 4 5.334 24.149 52.925 1 57.72 ? O2 GOL 307 A 1 
HETATM 5 C C3 GOL . . . I 4 3.601 23.114 51.557 1 57.55 ? C3 GOL 307 A 1 
HETATM 6 O O3 GOL . . . I 4 2.322 22.643 51.834 1 45.31 ? O3 GOL 307 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#