data_7B0P # _model_server_result.job_id vR5yejbRql-b087JtMEpOw _model_server_result.datetime_utc '2024-11-26 20:54:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b0p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":312}' # _entry.id 7B0P # _exptl.entry_id 7B0P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 15 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7B0P _cell.length_a 51.166 _cell.length_b 192.235 _cell.length_c 76.801 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B0P _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,EA 1 1 B,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,FA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 R N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7B0P _atom_sites.fract_transf_matrix[1][1] 0.019544 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005202 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013021 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 OLC A 1 301 282 OLC OLC . D 2 OLC A 1 302 382 OLC OLC . E 2 OLC A 1 303 383 OLC OLC . F 2 OLC A 1 304 401 OLC OLC . G 3 GOL A 1 305 601 GOL GOL . H 3 GOL A 1 306 1601 GOL GOL . I 3 GOL A 1 307 1801 GOL GOL . J 3 GOL A 1 308 1901 GOL GOL . K 3 GOL A 1 309 2101 GOL GOL . L 3 GOL A 1 310 2201 GOL GOL . M 3 GOL A 1 311 2501 GOL GOL . N 3 GOL A 1 312 2601 GOL GOL . O 3 GOL A 1 313 2701 GOL GOL . P 3 GOL A 1 314 3001 GOL GOL . Q 2 OLC A 1 315 3101 OLC OLC . R 3 GOL A 1 316 3201 GOL GOL . S 2 OLC B 1 301 282 OLC OLC . T 2 OLC B 1 302 382 OLC OLC . U 2 OLC B 1 303 501 OLC OLC . V 2 OLC B 1 304 502 OLC OLC . W 2 OLC B 1 305 1501 OLC OLC . X 2 OLC B 1 306 1701 OLC OLC . Y 2 OLC B 1 307 1801 OLC OLC . Z 3 GOL B 1 308 1901 GOL GOL . AA 3 GOL B 1 309 2001 GOL GOL . BA 3 GOL B 1 310 2301 GOL GOL . CA 3 GOL B 1 311 2601 GOL GOL . DA 4 PG5 B 1 312 2701 PG5 PG5 . EA 5 HOH A 1 401 177 HOH HOH . EA 5 HOH A 2 402 36 HOH HOH . EA 5 HOH A 3 403 57 HOH HOH . EA 5 HOH A 4 404 113 HOH HOH . EA 5 HOH A 5 405 79 HOH HOH . EA 5 HOH A 6 406 112 HOH HOH . EA 5 HOH A 7 407 154 HOH HOH . EA 5 HOH A 8 408 53 HOH HOH . EA 5 HOH A 9 409 93 HOH HOH . EA 5 HOH A 10 410 20 HOH HOH . EA 5 HOH A 11 411 19 HOH HOH . EA 5 HOH A 12 412 21 HOH HOH . EA 5 HOH A 13 413 110 HOH HOH . EA 5 HOH A 14 414 5 HOH HOH . EA 5 HOH A 15 415 169 HOH HOH . EA 5 HOH A 16 416 30 HOH HOH . EA 5 HOH A 17 417 116 HOH HOH . EA 5 HOH A 18 418 54 HOH HOH . EA 5 HOH A 19 419 142 HOH HOH . EA 5 HOH A 20 420 35 HOH HOH . EA 5 HOH A 21 421 153 HOH HOH . EA 5 HOH A 22 422 7 HOH HOH . EA 5 HOH A 23 423 131 HOH HOH . EA 5 HOH A 24 424 166 HOH HOH . EA 5 HOH A 25 425 60 HOH HOH . EA 5 HOH A 26 426 42 HOH HOH . EA 5 HOH A 27 427 81 HOH HOH . EA 5 HOH A 28 428 51 HOH HOH . EA 5 HOH A 29 429 94 HOH HOH . EA 5 HOH A 30 430 55 HOH HOH . EA 5 HOH A 31 431 90 HOH HOH . EA 5 HOH A 32 432 4 HOH HOH . EA 5 HOH A 33 433 34 HOH HOH . EA 5 HOH A 34 434 91 HOH HOH . EA 5 HOH A 35 435 128 HOH HOH . EA 5 HOH A 36 436 99 HOH HOH . EA 5 HOH A 37 437 82 HOH HOH . EA 5 HOH A 38 438 11 HOH HOH . EA 5 HOH A 39 439 17 HOH HOH . EA 5 HOH A 40 440 44 HOH HOH . EA 5 HOH A 41 441 8 HOH HOH . EA 5 HOH A 42 442 115 HOH HOH . EA 5 HOH A 43 443 98 HOH HOH . EA 5 HOH A 44 444 78 HOH HOH . EA 5 HOH A 45 445 132 HOH HOH . EA 5 HOH A 46 446 95 HOH HOH . EA 5 HOH A 47 447 155 HOH HOH . EA 5 HOH A 48 448 45 HOH HOH . EA 5 HOH A 49 449 77 HOH HOH . EA 5 HOH A 50 450 180 HOH HOH . EA 5 HOH A 51 451 135 HOH HOH . EA 5 HOH A 52 452 138 HOH HOH . EA 5 HOH A 53 453 47 HOH HOH . EA 5 HOH A 54 454 37 HOH HOH . EA 5 HOH A 55 455 165 HOH HOH . EA 5 HOH A 56 456 50 HOH HOH . EA 5 HOH A 57 457 48 HOH HOH . EA 5 HOH A 58 458 76 HOH HOH . EA 5 HOH A 59 459 183 HOH HOH . EA 5 HOH A 60 460 52 HOH HOH . EA 5 HOH A 61 461 29 HOH HOH . EA 5 HOH A 62 462 9 HOH HOH . EA 5 HOH A 63 463 83 HOH HOH . EA 5 HOH A 64 464 56 HOH HOH . EA 5 HOH A 65 465 100 HOH HOH . EA 5 HOH A 66 466 170 HOH HOH . EA 5 HOH A 67 467 16 HOH HOH . EA 5 HOH A 68 468 175 HOH HOH . EA 5 HOH A 69 469 3 HOH HOH . EA 5 HOH A 70 470 101 HOH HOH . EA 5 HOH A 71 471 119 HOH HOH . EA 5 HOH A 72 472 58 HOH HOH . EA 5 HOH A 73 473 75 HOH HOH . EA 5 HOH A 74 474 137 HOH HOH . EA 5 HOH A 75 475 118 HOH HOH . EA 5 HOH A 76 476 117 HOH HOH . EA 5 HOH A 77 477 87 HOH HOH . EA 5 HOH A 78 478 96 HOH HOH . EA 5 HOH A 79 479 109 HOH HOH . EA 5 HOH A 80 480 179 HOH HOH . EA 5 HOH A 81 481 10 HOH HOH . EA 5 HOH A 82 482 71 HOH HOH . EA 5 HOH A 83 483 80 HOH HOH . EA 5 HOH A 84 484 178 HOH HOH . EA 5 HOH A 85 485 188 HOH HOH . EA 5 HOH A 86 486 73 HOH HOH . EA 5 HOH A 87 487 74 HOH HOH . EA 5 HOH A 88 488 85 HOH HOH . EA 5 HOH A 89 489 143 HOH HOH . EA 5 HOH A 90 490 181 HOH HOH . EA 5 HOH A 91 491 162 HOH HOH . EA 5 HOH A 92 492 164 HOH HOH . EA 5 HOH A 93 493 186 HOH HOH . EA 5 HOH A 94 494 187 HOH HOH . EA 5 HOH A 95 495 163 HOH HOH . EA 5 HOH A 96 496 184 HOH HOH . EA 5 HOH A 97 497 133 HOH HOH . EA 5 HOH A 98 498 86 HOH HOH . EA 5 HOH A 99 499 134 HOH HOH . FA 5 HOH B 1 401 127 HOH HOH . FA 5 HOH B 2 402 158 HOH HOH . FA 5 HOH B 3 403 174 HOH HOH . FA 5 HOH B 4 404 167 HOH HOH . FA 5 HOH B 5 405 31 HOH HOH . FA 5 HOH B 6 406 182 HOH HOH . FA 5 HOH B 7 407 28 HOH HOH . FA 5 HOH B 8 408 147 HOH HOH . FA 5 HOH B 9 409 159 HOH HOH . FA 5 HOH B 10 410 15 HOH HOH . FA 5 HOH B 11 411 24 HOH HOH . FA 5 HOH B 12 412 26 HOH HOH . FA 5 HOH B 13 413 27 HOH HOH . FA 5 HOH B 14 414 1 HOH HOH . FA 5 HOH B 15 415 102 HOH HOH . FA 5 HOH B 16 416 46 HOH HOH . FA 5 HOH B 17 417 49 HOH HOH . FA 5 HOH B 18 418 22 HOH HOH . FA 5 HOH B 19 419 89 HOH HOH . FA 5 HOH B 20 420 146 HOH HOH . FA 5 HOH B 21 421 144 HOH HOH . FA 5 HOH B 22 422 114 HOH HOH . FA 5 HOH B 23 423 103 HOH HOH . FA 5 HOH B 24 424 66 HOH HOH . FA 5 HOH B 25 425 25 HOH HOH . FA 5 HOH B 26 426 64 HOH HOH . FA 5 HOH B 27 427 13 HOH HOH . FA 5 HOH B 28 428 33 HOH HOH . FA 5 HOH B 29 429 39 HOH HOH . FA 5 HOH B 30 430 32 HOH HOH . FA 5 HOH B 31 431 18 HOH HOH . FA 5 HOH B 32 432 67 HOH HOH . FA 5 HOH B 33 433 121 HOH HOH . FA 5 HOH B 34 434 6 HOH HOH . FA 5 HOH B 35 435 176 HOH HOH . FA 5 HOH B 36 436 68 HOH HOH . FA 5 HOH B 37 437 69 HOH HOH . FA 5 HOH B 38 438 126 HOH HOH . FA 5 HOH B 39 439 168 HOH HOH . FA 5 HOH B 40 440 130 HOH HOH . FA 5 HOH B 41 441 157 HOH HOH . FA 5 HOH B 42 442 150 HOH HOH . FA 5 HOH B 43 443 14 HOH HOH . FA 5 HOH B 44 444 129 HOH HOH . FA 5 HOH B 45 445 171 HOH HOH . FA 5 HOH B 46 446 145 HOH HOH . FA 5 HOH B 47 447 136 HOH HOH . FA 5 HOH B 48 448 139 HOH HOH . FA 5 HOH B 49 449 120 HOH HOH . FA 5 HOH B 50 450 160 HOH HOH . FA 5 HOH B 51 451 84 HOH HOH . FA 5 HOH B 52 452 70 HOH HOH . FA 5 HOH B 53 453 161 HOH HOH . FA 5 HOH B 54 454 72 HOH HOH . FA 5 HOH B 55 455 148 HOH HOH . FA 5 HOH B 56 456 151 HOH HOH . FA 5 HOH B 57 457 141 HOH HOH . FA 5 HOH B 58 458 108 HOH HOH . FA 5 HOH B 59 459 40 HOH HOH . FA 5 HOH B 60 460 23 HOH HOH . FA 5 HOH B 61 461 88 HOH HOH . FA 5 HOH B 62 462 105 HOH HOH . FA 5 HOH B 63 463 156 HOH HOH . FA 5 HOH B 64 464 104 HOH HOH . FA 5 HOH B 65 465 173 HOH HOH . FA 5 HOH B 66 466 124 HOH HOH . FA 5 HOH B 67 467 152 HOH HOH . FA 5 HOH B 68 468 65 HOH HOH . FA 5 HOH B 69 469 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . N 3 -15.732 48.505 -4.436 1 58.65 ? C1 GOL 312 A 1 HETATM 2 O O1 GOL . . . N 3 -14.496 49.082 -4.143 1 58.07 ? O1 GOL 312 A 1 HETATM 3 C C2 GOL . . . N 3 -15.75 47.13 -3.736 1 59.76 ? C2 GOL 312 A 1 HETATM 4 O O2 GOL . . . N 3 -15.521 47.242 -2.373 1 60.78 ? O2 GOL 312 A 1 HETATM 5 C C3 GOL . . . N 3 -17.125 46.509 -4.069 1 59.95 ? C3 GOL 312 A 1 HETATM 6 O O3 GOL . . . N 3 -17.342 45.492 -3.138 1 60.34 ? O3 GOL 312 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #