data_7B1V # _model_server_result.job_id WMizIo3bN3qYpRDPzkqhtw _model_server_result.datetime_utc '2024-10-19 19:14:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 7B1V # _exptl.entry_id 7B1V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 109.12 _cell.angle_beta 93.2 _cell.angle_gamma 113.98 _cell.entry_id 7B1V _cell.length_a 43.888 _cell.length_b 45.564 _cell.length_c 66.275 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 103 A ALA 101 1_555 A N CSD 104 A CSD 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C CSD 104 A CSD 102 1_555 A N ARG 105 A ARG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale3 B C ALA 103 B ALA 101 1_555 B N CSD 104 B CSD 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale4 B C CSD 104 B CSD 102 1_555 B N ARG 105 B ARG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? metalc ? metalc1 A SD MET 12 A MET 10 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc2 A NE2 HIS 81 A HIS 79 1_555 D CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc3 A OE2 GLU 85 A GLU 83 1_555 D CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc4 A ND1 HIS 100 A HIS 98 1_555 D CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc5 A O CSD 104 A CSD 102 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc6 A OD2 CSD 104 A CSD 102 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc7 A OE2 GLU 107 A GLU 105 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc8 A NE2 HIS 108 A HIS 106 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc9 A OE2 GLU 174 A GLU 172 1_555 D CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? metalc ? metalc10 A OE1 GLN 177 A GLN 175 1_555 D CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc11 C CO CO . A CO 301 1_555 G O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc12 B SD MET 12 B MET 10 1_555 E CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc13 B NE2 HIS 81 B HIS 79 1_555 F CO CO . B CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc14 B OE2 GLU 85 B GLU 83 1_555 F CO CO . B CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc15 B ND1 HIS 100 B HIS 98 1_555 F CO CO . B CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc16 B O CSD 104 B CSD 102 1_555 E CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc17 B OD2 CSD 104 B CSD 102 1_555 E CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc18 B OE2 GLU 107 B GLU 105 1_555 E CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc19 B NE2 HIS 108 B HIS 106 1_555 E CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc20 B OE2 GLU 174 B GLU 172 1_555 F CO CO . B CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc21 B OE1 GLN 177 B GLN 175 1_555 F CO CO . B CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc22 E CO CO . B CO 301 1_555 H O HOH . B HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7B1V _atom_sites.fract_transf_matrix[1][1] 0.022785 _atom_sites.fract_transf_matrix[1][2] 0.010133 _atom_sites.fract_transf_matrix[1][3] 0.005593 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024019 _atom_sites.fract_transf_matrix[2][3] 0.009988 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 301 2 CO CO . D 2 CO A 1 302 3 CO CO . E 2 CO B 1 301 1 CO CO . F 2 CO B 1 302 4 CO CO . G 3 HOH A 1 401 56 HOH HOH . G 3 HOH A 2 402 53 HOH HOH . G 3 HOH A 3 403 35 HOH HOH . G 3 HOH A 4 404 38 HOH HOH . G 3 HOH A 5 405 22 HOH HOH . G 3 HOH A 6 406 55 HOH HOH . G 3 HOH A 7 407 40 HOH HOH . G 3 HOH A 8 408 1 HOH HOH . G 3 HOH A 9 409 52 HOH HOH . G 3 HOH A 10 410 2 HOH HOH . G 3 HOH A 11 411 8 HOH HOH . G 3 HOH A 12 412 9 HOH HOH . G 3 HOH A 13 413 59 HOH HOH . G 3 HOH A 14 414 15 HOH HOH . G 3 HOH A 15 415 4 HOH HOH . G 3 HOH A 16 416 16 HOH HOH . G 3 HOH A 17 417 51 HOH HOH . G 3 HOH A 18 418 50 HOH HOH . G 3 HOH A 19 419 7 HOH HOH . G 3 HOH A 20 420 45 HOH HOH . G 3 HOH A 21 421 46 HOH HOH . G 3 HOH A 22 422 30 HOH HOH . G 3 HOH A 23 423 47 HOH HOH . G 3 HOH A 24 424 57 HOH HOH . G 3 HOH A 25 425 66 HOH HOH . H 3 HOH B 1 401 60 HOH HOH . H 3 HOH B 2 402 39 HOH HOH . H 3 HOH B 3 403 21 HOH HOH . H 3 HOH B 4 404 54 HOH HOH . H 3 HOH B 5 405 18 HOH HOH . H 3 HOH B 6 406 20 HOH HOH . H 3 HOH B 7 407 17 HOH HOH . H 3 HOH B 8 408 19 HOH HOH . H 3 HOH B 9 409 62 HOH HOH . H 3 HOH B 10 410 28 HOH HOH . H 3 HOH B 11 411 48 HOH HOH . H 3 HOH B 12 412 11 HOH HOH . H 3 HOH B 13 413 58 HOH HOH . H 3 HOH B 14 414 29 HOH HOH . H 3 HOH B 15 415 23 HOH HOH . H 3 HOH B 16 416 37 HOH HOH . H 3 HOH B 17 417 24 HOH HOH . H 3 HOH B 18 418 36 HOH HOH . H 3 HOH B 19 419 43 HOH HOH . H 3 HOH B 20 420 33 HOH HOH . H 3 HOH B 21 421 31 HOH HOH . H 3 HOH B 22 422 3 HOH HOH . H 3 HOH B 23 423 68 HOH HOH . H 3 HOH B 24 424 6 HOH HOH . H 3 HOH B 25 425 63 HOH HOH . H 3 HOH B 26 426 25 HOH HOH . H 3 HOH B 27 427 49 HOH HOH . H 3 HOH B 28 428 14 HOH HOH . H 3 HOH B 29 429 32 HOH HOH . H 3 HOH B 30 430 27 HOH HOH . H 3 HOH B 31 431 34 HOH HOH . H 3 HOH B 32 432 26 HOH HOH . H 3 HOH B 33 433 12 HOH HOH . H 3 HOH B 34 434 67 HOH HOH . H 3 HOH B 35 435 5 HOH HOH . H 3 HOH B 36 436 41 HOH HOH . H 3 HOH B 37 437 13 HOH HOH . H 3 HOH B 38 438 10 HOH HOH . H 3 HOH B 39 439 61 HOH HOH . H 3 HOH B 40 440 44 HOH HOH . H 3 HOH B 41 441 65 HOH HOH . H 3 HOH B 42 442 64 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 2.731 _atom_site.Cartn_y 15.338 _atom_site.Cartn_z -21.791 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #