data_7B2V
#
_model_server_result.job_id            to6xy1I8ht-ilhgAjhykrA 
_model_server_result.datetime_utc      '2025-06-20 22:50:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7b2v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":505}' 
#
_entry.id    7B2V 
#
_exptl.entry_id    7B2V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              247.29 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ethyl 4-(2,3-dihydroindol-1-yl)-4-oxidanylidene-butanoate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7B2V 
_cell.length_a            60.09 
_cell.length_b            71.53 
_cell.length_c            78.01 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7B2V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 B C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale2 A OG SER 155 A SER 232 1_555 F C04 SRH . A SRH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? 
#
_chem_comp.formula           'C14 H17 N O3' 
_chem_comp.formula_weight    247.29 
_chem_comp.id                SRH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ethyl 4-(2,3-dihydroindol-1-yl)-4-oxidanylidene-butanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 C11 SRH sing 355 n n 
C12 C13 SRH sing 356 n n 
C11 N10 SRH sing 357 n n 
C06 C07 SRH sing 358 n n 
C06 C04 SRH sing 359 n n 
N10 C08 SRH sing 360 n n 
N10 C18 SRH sing 361 n n 
C07 C08 SRH sing 362 n n 
C13 C14 SRH doub 363 n y 
C13 C18 SRH sing 364 n y 
C08 O09 SRH doub 365 n n 
C14 C15 SRH sing 366 n y 
C18 C17 SRH doub 367 n y 
C15 C16 SRH doub 368 n y 
O05 C04 SRH doub 369 n n 
C17 C16 SRH sing 370 n y 
C06 H2 SRH sing 371 n n 
C06 H3 SRH sing 372 n n 
C07 H4 SRH sing 373 n n 
C07 H5 SRH sing 374 n n 
C11 H6 SRH sing 375 n n 
C11 H7 SRH sing 376 n n 
C12 H8 SRH sing 377 n n 
C12 H9 SRH sing 378 n n 
C14 H10 SRH sing 379 n n 
C15 H11 SRH sing 380 n n 
C16 H12 SRH sing 381 n n 
C17 H13 SRH sing 382 n n 
C04 O1 SRH sing 383 n n 
O1 C2 SRH sing 384 n n 
C2 C3 SRH sing 385 n n 
C2 H1 SRH sing 386 n n 
C2 H14 SRH sing 387 n n 
C3 H15 SRH sing 388 n n 
C3 H16 SRH sing 389 n n 
C3 H17 SRH sing 390 n n 
#
_atom_sites.entry_id                     7B2V 
_atom_sites.fract_transf_matrix[1][1]    0.016642 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01398 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012819 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 501 1453 NAG NAG . 
C 3 SO4 A 1 502 1455 SO4 SO4 . 
D 3 SO4 A 1 503 1456 SO4 SO4 . 
E 4 DMS A 1 504 1501 DMS DMS . 
F 5 SRH A 1 505 1601 SRH 906 . 
G 6 EDO A 1 506 1701 EDO EDO . 
H 6 EDO A 1 507 1801 EDO EDO . 
I 6 EDO A 1 508 2001 EDO EDO . 
J 6 EDO A 1 509 2101 EDO EDO . 
K 7 GOL A 1 510 2201 GOL GOL . 
L 3 SO4 A 1 511 1 SO4 SO4 . 
M 3 SO4 A 1 512 2 SO4 SO4 . 
N 3 SO4 A 1 513 3 SO4 SO4 . 
O 3 SO4 A 1 514 4 SO4 SO4 . 
P 8 HOH A 1 601 149 HOH HOH . 
P 8 HOH A 2 602 30 HOH HOH . 
P 8 HOH A 3 603 75 HOH HOH . 
P 8 HOH A 4 604 228 HOH HOH . 
P 8 HOH A 5 605 224 HOH HOH . 
P 8 HOH A 6 606 27 HOH HOH . 
P 8 HOH A 7 607 146 HOH HOH . 
P 8 HOH A 8 608 15 HOH HOH . 
P 8 HOH A 9 609 225 HOH HOH . 
P 8 HOH A 10 610 77 HOH HOH . 
P 8 HOH A 11 611 14 HOH HOH . 
P 8 HOH A 12 612 11 HOH HOH . 
P 8 HOH A 13 613 128 HOH HOH . 
P 8 HOH A 14 614 175 HOH HOH . 
P 8 HOH A 15 615 229 HOH HOH . 
P 8 HOH A 16 616 107 HOH HOH . 
P 8 HOH A 17 617 9 HOH HOH . 
P 8 HOH A 18 618 142 HOH HOH . 
P 8 HOH A 19 619 64 HOH HOH . 
P 8 HOH A 20 620 211 HOH HOH . 
P 8 HOH A 21 621 85 HOH HOH . 
P 8 HOH A 22 622 111 HOH HOH . 
P 8 HOH A 23 623 109 HOH HOH . 
P 8 HOH A 24 624 226 HOH HOH . 
P 8 HOH A 25 625 5 HOH HOH . 
P 8 HOH A 26 626 89 HOH HOH . 
P 8 HOH A 27 627 93 HOH HOH . 
P 8 HOH A 28 628 215 HOH HOH . 
P 8 HOH A 29 629 87 HOH HOH . 
P 8 HOH A 30 630 52 HOH HOH . 
P 8 HOH A 31 631 44 HOH HOH . 
P 8 HOH A 32 632 40 HOH HOH . 
P 8 HOH A 33 633 231 HOH HOH . 
P 8 HOH A 34 634 230 HOH HOH . 
P 8 HOH A 35 635 18 HOH HOH . 
P 8 HOH A 36 636 37 HOH HOH . 
P 8 HOH A 37 637 222 HOH HOH . 
P 8 HOH A 38 638 137 HOH HOH . 
P 8 HOH A 39 639 12 HOH HOH . 
P 8 HOH A 40 640 221 HOH HOH . 
P 8 HOH A 41 641 65 HOH HOH . 
P 8 HOH A 42 642 25 HOH HOH . 
P 8 HOH A 43 643 10 HOH HOH . 
P 8 HOH A 44 644 82 HOH HOH . 
P 8 HOH A 45 645 232 HOH HOH . 
P 8 HOH A 46 646 72 HOH HOH . 
P 8 HOH A 47 647 61 HOH HOH . 
P 8 HOH A 48 648 57 HOH HOH . 
P 8 HOH A 49 649 101 HOH HOH . 
P 8 HOH A 50 650 125 HOH HOH . 
P 8 HOH A 51 651 113 HOH HOH . 
P 8 HOH A 52 652 124 HOH HOH . 
P 8 HOH A 53 653 48 HOH HOH . 
P 8 HOH A 54 654 67 HOH HOH . 
P 8 HOH A 55 655 92 HOH HOH . 
P 8 HOH A 56 656 86 HOH HOH . 
P 8 HOH A 57 657 216 HOH HOH . 
P 8 HOH A 58 658 71 HOH HOH . 
P 8 HOH A 59 659 117 HOH HOH . 
P 8 HOH A 60 660 2 HOH HOH . 
P 8 HOH A 61 661 26 HOH HOH . 
P 8 HOH A 62 662 95 HOH HOH . 
P 8 HOH A 63 663 62 HOH HOH . 
P 8 HOH A 64 664 96 HOH HOH . 
P 8 HOH A 65 665 212 HOH HOH . 
P 8 HOH A 66 666 122 HOH HOH . 
P 8 HOH A 67 667 60 HOH HOH . 
P 8 HOH A 68 668 34 HOH HOH . 
P 8 HOH A 69 669 6 HOH HOH . 
P 8 HOH A 70 670 217 HOH HOH . 
P 8 HOH A 71 671 4 HOH HOH . 
P 8 HOH A 72 672 99 HOH HOH . 
P 8 HOH A 73 673 13 HOH HOH . 
P 8 HOH A 74 674 121 HOH HOH . 
P 8 HOH A 75 675 112 HOH HOH . 
P 8 HOH A 76 676 233 HOH HOH . 
P 8 HOH A 77 677 56 HOH HOH . 
P 8 HOH A 78 678 29 HOH HOH . 
P 8 HOH A 79 679 106 HOH HOH . 
P 8 HOH A 80 680 8 HOH HOH . 
P 8 HOH A 81 681 105 HOH HOH . 
P 8 HOH A 82 682 161 HOH HOH . 
P 8 HOH A 83 683 227 HOH HOH . 
P 8 HOH A 84 684 114 HOH HOH . 
P 8 HOH A 85 685 70 HOH HOH . 
P 8 HOH A 86 686 214 HOH HOH . 
P 8 HOH A 87 687 223 HOH HOH . 
P 8 HOH A 88 688 141 HOH HOH . 
P 8 HOH A 89 689 31 HOH HOH . 
P 8 HOH A 90 690 83 HOH HOH . 
P 8 HOH A 91 691 7 HOH HOH . 
P 8 HOH A 92 692 66 HOH HOH . 
P 8 HOH A 93 693 50 HOH HOH . 
P 8 HOH A 94 694 198 HOH HOH . 
P 8 HOH A 95 695 43 HOH HOH . 
P 8 HOH A 96 696 183 HOH HOH . 
P 8 HOH A 97 697 119 HOH HOH . 
P 8 HOH A 98 698 59 HOH HOH . 
P 8 HOH A 99 699 42 HOH HOH . 
P 8 HOH A 100 700 36 HOH HOH . 
P 8 HOH A 101 701 120 HOH HOH . 
P 8 HOH A 102 702 220 HOH HOH . 
P 8 HOH A 103 703 201 HOH HOH . 
P 8 HOH A 104 704 88 HOH HOH . 
P 8 HOH A 105 705 16 HOH HOH . 
P 8 HOH A 106 706 110 HOH HOH . 
P 8 HOH A 107 707 130 HOH HOH . 
P 8 HOH A 108 708 129 HOH HOH . 
P 8 HOH A 109 709 213 HOH HOH . 
P 8 HOH A 110 710 54 HOH HOH . 
P 8 HOH A 111 711 219 HOH HOH . 
P 8 HOH A 112 712 17 HOH HOH . 
P 8 HOH A 113 713 131 HOH HOH . 
P 8 HOH A 114 714 20 HOH HOH . 
P 8 HOH A 115 715 218 HOH HOH . 
P 8 HOH A 116 716 210 HOH HOH . 
P 8 HOH A 117 717 116 HOH HOH . 
P 8 HOH A 118 718 158 HOH HOH . 
P 8 HOH A 119 719 78 HOH HOH . 
P 8 HOH A 120 720 199 HOH HOH . 
P 8 HOH A 121 721 118 HOH HOH . 
P 8 HOH A 122 722 140 HOH HOH . 
P 8 HOH A 123 723 39 HOH HOH . 
P 8 HOH A 124 724 32 HOH HOH . 
P 8 HOH A 125 725 144 HOH HOH . 
P 8 HOH A 126 726 45 HOH HOH . 
P 8 HOH A 127 727 139 HOH HOH . 
P 8 HOH A 128 728 132 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C04 SRH . . . F 5 22.647 68.137 73.152 1 17.48 ? C04 SRH 505 A 1 
HETATM 2 C C06 SRH . . . F 5 22.849 67.291 71.912 1 17.96 ? C06 SRH 505 A 1 
HETATM 3 C C07 SRH . . . F 5 23.925 66.216 72.012 1 17.79 ? C07 SRH 505 A 1 
HETATM 4 C C08 SRH . . . F 5 25.305 66.768 72.284 1 18.43 ? C08 SRH 505 A 1 
HETATM 5 C C11 SRH . . . F 5 26.325 64.609 71.508 1 18.38 ? C11 SRH 505 A 1 
HETATM 6 C C12 SRH . . . F 5 27.724 64.138 71.293 1 20 ? C12 SRH 505 A 1 
HETATM 7 C C13 SRH . . . F 5 28.58 65.158 72.031 1 19.1 ? C13 SRH 505 A 1 
HETATM 8 C C14 SRH . . . F 5 29.941 65.104 72.35 1 20.64 ? C14 SRH 505 A 1 
HETATM 9 C C15 SRH . . . F 5 30.466 66.174 73.099 1 22.6 ? C15 SRH 505 A 1 
HETATM 10 C C16 SRH . . . F 5 29.661 67.276 73.437 1 22.7 ? C16 SRH 505 A 1 
HETATM 11 C C17 SRH . . . F 5 28.308 67.326 73.13 1 22.19 ? C17 SRH 505 A 1 
HETATM 12 C C18 SRH . . . F 5 27.795 66.27 72.368 1 17.45 ? C18 SRH 505 A 1 
HETATM 13 N N10 SRH . . . F 5 26.429 65.967 72.006 1 18.8 ? N10 SRH 505 A 1 
HETATM 14 O O05 SRH . . . F 5 22.751 69.318 73.116 1 16.93 ? O05 SRH 505 A 1 
HETATM 15 O O09 SRH . . . F 5 25.471 67.861 72.754 1 19.98 ? O09 SRH 505 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#