data_7B2Y
#
_model_server_result.job_id            DlNhcTVbpkCOvhEyvapP4A 
_model_server_result.datetime_utc      '2024-11-22 23:01:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7b2y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    7B2Y 
#
_exptl.entry_id    7B2Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7B2Y 
_cell.length_a            60.01 
_cell.length_b            71.54 
_cell.length_c            78.02 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7B2Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 B C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale2 A OG SER 155 A SER 232 1_555 G C04 SRQ . A SRQ 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 268 n n 
C1 O1 NAG sing 269 n n 
C1 O5 NAG sing 270 n n 
C1 H1 NAG sing 271 n n 
C2 C3 NAG sing 272 n n 
C2 N2 NAG sing 273 n n 
C2 H2 NAG sing 274 n n 
C3 C4 NAG sing 275 n n 
C3 O3 NAG sing 276 n n 
C3 H3 NAG sing 277 n n 
C4 C5 NAG sing 278 n n 
C4 O4 NAG sing 279 n n 
C4 H4 NAG sing 280 n n 
C5 C6 NAG sing 281 n n 
C5 O5 NAG sing 282 n n 
C5 H5 NAG sing 283 n n 
C6 O6 NAG sing 284 n n 
C6 H61 NAG sing 285 n n 
C6 H62 NAG sing 286 n n 
C7 C8 NAG sing 287 n n 
C7 N2 NAG sing 288 n n 
C7 O7 NAG doub 289 n n 
C8 H81 NAG sing 290 n n 
C8 H82 NAG sing 291 n n 
C8 H83 NAG sing 292 n n 
N2 HN2 NAG sing 293 n n 
O1 HO1 NAG sing 294 n n 
O3 HO3 NAG sing 295 n n 
O4 HO4 NAG sing 296 n n 
O6 HO6 NAG sing 297 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7B2Y 
_atom_sites.fract_transf_matrix[1][1]    0.016664 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013978 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012817 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 501 1453 NAG NAG . 
C 3 SO4 A 1 502 1455 SO4 SO4 . 
D 3 SO4 A 1 503 1456 SO4 SO4 . 
E 3 SO4 A 1 504 1457 SO4 SO4 . 
F 4 DMS A 1 505 1501 DMS DMS . 
G 5 SRQ A 1 506 1601 SRQ 906 . 
H 6 EDO A 1 507 1701 EDO EDO . 
I 6 EDO A 1 508 1801 EDO EDO . 
J 6 EDO A 1 509 2001 EDO EDO . 
K 6 EDO A 1 510 2101 EDO EDO . 
L 7 GOL A 1 511 2201 GOL GOL . 
M 3 SO4 A 1 512 1 SO4 SO4 . 
N 3 SO4 A 1 513 2 SO4 SO4 . 
O 3 SO4 A 1 514 3 SO4 SO4 . 
P 3 SO4 A 1 515 4 SO4 SO4 . 
Q 8 HOH A 1 601 146 HOH HOH . 
Q 8 HOH A 2 602 75 HOH HOH . 
Q 8 HOH A 3 603 224 HOH HOH . 
Q 8 HOH A 4 604 89 HOH HOH . 
Q 8 HOH A 5 605 27 HOH HOH . 
Q 8 HOH A 6 606 149 HOH HOH . 
Q 8 HOH A 7 607 9 HOH HOH . 
Q 8 HOH A 8 608 225 HOH HOH . 
Q 8 HOH A 9 609 15 HOH HOH . 
Q 8 HOH A 10 610 233 HOH HOH . 
Q 8 HOH A 11 611 12 HOH HOH . 
Q 8 HOH A 12 612 77 HOH HOH . 
Q 8 HOH A 13 613 64 HOH HOH . 
Q 8 HOH A 14 614 111 HOH HOH . 
Q 8 HOH A 15 615 122 HOH HOH . 
Q 8 HOH A 16 616 211 HOH HOH . 
Q 8 HOH A 17 617 85 HOH HOH . 
Q 8 HOH A 18 618 107 HOH HOH . 
Q 8 HOH A 19 619 215 HOH HOH . 
Q 8 HOH A 20 620 14 HOH HOH . 
Q 8 HOH A 21 621 109 HOH HOH . 
Q 8 HOH A 22 622 236 HOH HOH . 
Q 8 HOH A 23 623 128 HOH HOH . 
Q 8 HOH A 24 624 230 HOH HOH . 
Q 8 HOH A 25 625 142 HOH HOH . 
Q 8 HOH A 26 626 40 HOH HOH . 
Q 8 HOH A 27 627 87 HOH HOH . 
Q 8 HOH A 28 628 82 HOH HOH . 
Q 8 HOH A 29 629 5 HOH HOH . 
Q 8 HOH A 30 630 44 HOH HOH . 
Q 8 HOH A 31 631 30 HOH HOH . 
Q 8 HOH A 32 632 48 HOH HOH . 
Q 8 HOH A 33 633 72 HOH HOH . 
Q 8 HOH A 34 634 71 HOH HOH . 
Q 8 HOH A 35 635 26 HOH HOH . 
Q 8 HOH A 36 636 37 HOH HOH . 
Q 8 HOH A 37 637 221 HOH HOH . 
Q 8 HOH A 38 638 18 HOH HOH . 
Q 8 HOH A 39 639 65 HOH HOH . 
Q 8 HOH A 40 640 52 HOH HOH . 
Q 8 HOH A 41 641 61 HOH HOH . 
Q 8 HOH A 42 642 54 HOH HOH . 
Q 8 HOH A 43 643 125 HOH HOH . 
Q 8 HOH A 44 644 4 HOH HOH . 
Q 8 HOH A 45 645 25 HOH HOH . 
Q 8 HOH A 46 646 60 HOH HOH . 
Q 8 HOH A 47 647 11 HOH HOH . 
Q 8 HOH A 48 648 124 HOH HOH . 
Q 8 HOH A 49 649 57 HOH HOH . 
Q 8 HOH A 50 650 67 HOH HOH . 
Q 8 HOH A 51 651 222 HOH HOH . 
Q 8 HOH A 52 652 96 HOH HOH . 
Q 8 HOH A 53 653 93 HOH HOH . 
Q 8 HOH A 54 654 101 HOH HOH . 
Q 8 HOH A 55 655 212 HOH HOH . 
Q 8 HOH A 56 656 10 HOH HOH . 
Q 8 HOH A 57 657 106 HOH HOH . 
Q 8 HOH A 58 658 95 HOH HOH . 
Q 8 HOH A 59 659 86 HOH HOH . 
Q 8 HOH A 60 660 99 HOH HOH . 
Q 8 HOH A 61 661 29 HOH HOH . 
Q 8 HOH A 62 662 113 HOH HOH . 
Q 8 HOH A 63 663 216 HOH HOH . 
Q 8 HOH A 64 664 92 HOH HOH . 
Q 8 HOH A 65 665 62 HOH HOH . 
Q 8 HOH A 66 666 117 HOH HOH . 
Q 8 HOH A 67 667 34 HOH HOH . 
Q 8 HOH A 68 668 6 HOH HOH . 
Q 8 HOH A 69 669 83 HOH HOH . 
Q 8 HOH A 70 670 223 HOH HOH . 
Q 8 HOH A 71 671 13 HOH HOH . 
Q 8 HOH A 72 672 217 HOH HOH . 
Q 8 HOH A 73 673 8 HOH HOH . 
Q 8 HOH A 74 674 121 HOH HOH . 
Q 8 HOH A 75 675 2 HOH HOH . 
Q 8 HOH A 76 676 112 HOH HOH . 
Q 8 HOH A 77 677 36 HOH HOH . 
Q 8 HOH A 78 678 161 HOH HOH . 
Q 8 HOH A 79 679 105 HOH HOH . 
Q 8 HOH A 80 680 119 HOH HOH . 
Q 8 HOH A 81 681 214 HOH HOH . 
Q 8 HOH A 82 682 227 HOH HOH . 
Q 8 HOH A 83 683 31 HOH HOH . 
Q 8 HOH A 84 684 7 HOH HOH . 
Q 8 HOH A 85 685 70 HOH HOH . 
Q 8 HOH A 86 686 66 HOH HOH . 
Q 8 HOH A 87 687 141 HOH HOH . 
Q 8 HOH A 88 688 43 HOH HOH . 
Q 8 HOH A 89 689 50 HOH HOH . 
Q 8 HOH A 90 690 114 HOH HOH . 
Q 8 HOH A 91 691 198 HOH HOH . 
Q 8 HOH A 92 692 183 HOH HOH . 
Q 8 HOH A 93 693 201 HOH HOH . 
Q 8 HOH A 94 694 220 HOH HOH . 
Q 8 HOH A 95 695 42 HOH HOH . 
Q 8 HOH A 96 696 231 HOH HOH . 
Q 8 HOH A 97 697 88 HOH HOH . 
Q 8 HOH A 98 698 59 HOH HOH . 
Q 8 HOH A 99 699 16 HOH HOH . 
Q 8 HOH A 100 700 130 HOH HOH . 
Q 8 HOH A 101 701 218 HOH HOH . 
Q 8 HOH A 102 702 213 HOH HOH . 
Q 8 HOH A 103 703 17 HOH HOH . 
Q 8 HOH A 104 704 129 HOH HOH . 
Q 8 HOH A 105 705 20 HOH HOH . 
Q 8 HOH A 106 706 219 HOH HOH . 
Q 8 HOH A 107 707 237 HOH HOH . 
Q 8 HOH A 108 708 78 HOH HOH . 
Q 8 HOH A 109 709 118 HOH HOH . 
Q 8 HOH A 110 710 235 HOH HOH . 
Q 8 HOH A 111 711 32 HOH HOH . 
Q 8 HOH A 112 712 144 HOH HOH . 
Q 8 HOH A 113 713 45 HOH HOH . 
Q 8 HOH A 114 714 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . B 2 34.216 92.323 78.821 1 25.93 ? C1 NAG 501 A 1 
HETATM 2 C C2 NAG . . . B 2 35.209 92.782 79.892 1 34.51 ? C2 NAG 501 A 1 
HETATM 3 C C3 NAG . . . B 2 36.654 92.504 79.463 1 36.99 ? C3 NAG 501 A 1 
HETATM 4 C C4 NAG . . . B 2 36.819 91.095 78.908 1 32.87 ? C4 NAG 501 A 1 
HETATM 5 C C5 NAG . . . B 2 35.76 90.83 77.851 1 32.56 ? C5 NAG 501 A 1 
HETATM 6 C C6 NAG . . . B 2 35.804 89.436 77.259 1 35.45 ? C6 NAG 501 A 1 
HETATM 7 C C7 NAG . . . B 2 34.39 94.677 81.217 1 46.86 ? C7 NAG 501 A 1 
HETATM 8 C C8 NAG . . . B 2 34.289 96.172 81.309 1 48.25 ? C8 NAG 501 A 1 
HETATM 9 N N2 NAG . . . B 2 35.032 94.202 80.149 1 40.28 ? N2 NAG 501 A 1 
HETATM 10 O O3 NAG . . . B 2 37.502 92.687 80.595 1 39.67 ? O3 NAG 501 A 1 
HETATM 11 O O4 NAG . . . B 2 38.109 91.004 78.315 1 35.25 ? O4 NAG 501 A 1 
HETATM 12 O O5 NAG . . . B 2 34.476 90.984 78.469 1 29 ? O5 NAG 501 A 1 
HETATM 13 O O6 NAG . . . B 2 35.546 88.422 78.224 1 39.14 ? O6 NAG 501 A 1 
HETATM 14 O O7 NAG . . . B 2 33.913 93.935 82.068 1 47.74 ? O7 NAG 501 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           14 
#