data_7B33 # _model_server_result.job_id UO2UzgZnRZtam5ZoppXcIA _model_server_result.datetime_utc '2024-11-23 13:16:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b33 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 7B33 # _exptl.entry_id 7B33 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.128 _cell.angle_gamma 90 _cell.entry_id 7B33 _cell.length_a 98.972 _cell.length_b 58.954 _cell.length_c 61.441 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B33 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7B33 _atom_sites.fract_transf_matrix[1][1] 0.010104 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000552 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016962 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0163 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 901 901 EDO EDO . C 2 EDO A 1 902 1201 EDO EDO . D 2 EDO A 1 903 2001 EDO EDO . E 2 EDO A 1 904 2301 EDO EDO . F 3 SQE A 1 905 2302 SQE M11 . G 4 HOH A 1 1001 74 HOH HOH . G 4 HOH A 2 1002 64 HOH HOH . G 4 HOH A 3 1003 11 HOH HOH . G 4 HOH A 4 1004 58 HOH HOH . G 4 HOH A 5 1005 26 HOH HOH . G 4 HOH A 6 1006 6 HOH HOH . G 4 HOH A 7 1007 16 HOH HOH . G 4 HOH A 8 1008 57 HOH HOH . G 4 HOH A 9 1009 49 HOH HOH . G 4 HOH A 10 1010 92 HOH HOH . G 4 HOH A 11 1011 93 HOH HOH . G 4 HOH A 12 1012 8 HOH HOH . G 4 HOH A 13 1013 21 HOH HOH . G 4 HOH A 14 1014 15 HOH HOH . G 4 HOH A 15 1015 43 HOH HOH . G 4 HOH A 16 1016 18 HOH HOH . G 4 HOH A 17 1017 53 HOH HOH . G 4 HOH A 18 1018 94 HOH HOH . G 4 HOH A 19 1019 2 HOH HOH . G 4 HOH A 20 1020 29 HOH HOH . G 4 HOH A 21 1021 35 HOH HOH . G 4 HOH A 22 1022 81 HOH HOH . G 4 HOH A 23 1023 99 HOH HOH . G 4 HOH A 24 1024 72 HOH HOH . G 4 HOH A 25 1025 76 HOH HOH . G 4 HOH A 26 1026 40 HOH HOH . G 4 HOH A 27 1027 67 HOH HOH . G 4 HOH A 28 1028 22 HOH HOH . G 4 HOH A 29 1029 5 HOH HOH . G 4 HOH A 30 1030 87 HOH HOH . G 4 HOH A 31 1031 97 HOH HOH . G 4 HOH A 32 1032 63 HOH HOH . G 4 HOH A 33 1033 28 HOH HOH . G 4 HOH A 34 1034 24 HOH HOH . G 4 HOH A 35 1035 39 HOH HOH . G 4 HOH A 36 1036 95 HOH HOH . G 4 HOH A 37 1037 54 HOH HOH . G 4 HOH A 38 1038 10 HOH HOH . G 4 HOH A 39 1039 37 HOH HOH . G 4 HOH A 40 1040 32 HOH HOH . G 4 HOH A 41 1041 45 HOH HOH . G 4 HOH A 42 1042 46 HOH HOH . G 4 HOH A 43 1043 20 HOH HOH . G 4 HOH A 44 1044 33 HOH HOH . G 4 HOH A 45 1045 98 HOH HOH . G 4 HOH A 46 1046 27 HOH HOH . G 4 HOH A 47 1047 7 HOH HOH . G 4 HOH A 48 1048 44 HOH HOH . G 4 HOH A 49 1049 14 HOH HOH . G 4 HOH A 50 1050 13 HOH HOH . G 4 HOH A 51 1051 1 HOH HOH . G 4 HOH A 52 1052 12 HOH HOH . G 4 HOH A 53 1053 79 HOH HOH . G 4 HOH A 54 1054 34 HOH HOH . G 4 HOH A 55 1055 78 HOH HOH . G 4 HOH A 56 1056 90 HOH HOH . G 4 HOH A 57 1057 9 HOH HOH . G 4 HOH A 58 1058 51 HOH HOH . G 4 HOH A 59 1059 19 HOH HOH . G 4 HOH A 60 1060 83 HOH HOH . G 4 HOH A 61 1061 30 HOH HOH . G 4 HOH A 62 1062 42 HOH HOH . G 4 HOH A 63 1063 23 HOH HOH . G 4 HOH A 64 1064 41 HOH HOH . G 4 HOH A 65 1065 91 HOH HOH . G 4 HOH A 66 1066 31 HOH HOH . G 4 HOH A 67 1067 96 HOH HOH . G 4 HOH A 68 1068 3 HOH HOH . G 4 HOH A 69 1069 88 HOH HOH . G 4 HOH A 70 1070 65 HOH HOH . G 4 HOH A 71 1071 38 HOH HOH . G 4 HOH A 72 1072 100 HOH HOH . G 4 HOH A 73 1073 73 HOH HOH . G 4 HOH A 74 1074 75 HOH HOH . G 4 HOH A 75 1075 47 HOH HOH . G 4 HOH A 76 1076 86 HOH HOH . G 4 HOH A 77 1077 60 HOH HOH . G 4 HOH A 78 1078 56 HOH HOH . G 4 HOH A 79 1079 82 HOH HOH . G 4 HOH A 80 1080 36 HOH HOH . G 4 HOH A 81 1081 80 HOH HOH . G 4 HOH A 82 1082 77 HOH HOH . G 4 HOH A 83 1083 25 HOH HOH . G 4 HOH A 84 1084 61 HOH HOH . G 4 HOH A 85 1085 59 HOH HOH . G 4 HOH A 86 1086 68 HOH HOH . G 4 HOH A 87 1087 89 HOH HOH . G 4 HOH A 88 1088 70 HOH HOH . G 4 HOH A 89 1089 50 HOH HOH . G 4 HOH A 90 1090 85 HOH HOH . G 4 HOH A 91 1091 66 HOH HOH . G 4 HOH A 92 1092 84 HOH HOH . G 4 HOH A 93 1093 69 HOH HOH . G 4 HOH A 94 1094 62 HOH HOH . G 4 HOH A 95 1095 17 HOH HOH . G 4 HOH A 96 1096 4 HOH HOH . G 4 HOH A 97 1097 52 HOH HOH . G 4 HOH A 98 1098 48 HOH HOH . G 4 HOH A 99 1099 103 HOH HOH . G 4 HOH A 100 1100 55 HOH HOH . G 4 HOH A 101 1101 102 HOH HOH . G 4 HOH A 102 1102 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -9.996 -8.947 30.894 1 61.75 ? C1 EDO 901 A 1 HETATM 2 O O1 EDO . . . B 2 -9.854 -8.548 32.266 1 70.73 ? O1 EDO 901 A 1 HETATM 3 C C2 EDO . . . B 2 -8.633 -9.297 30.3 1 55.16 ? C2 EDO 901 A 1 HETATM 4 O O2 EDO . . . B 2 -8.505 -8.797 28.96 1 44.46 ? O2 EDO 901 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 617 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #